Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:59:01 (1828261): wrapper (7.7.26015): starting
03:59:01 (1828261): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:59:01] Arguments: --nthreads 8
[2025-10-13 03:59:01] Threads: 8
[2025-10-13 03:59:01] Checking for CVMFS
[2025-10-13 03:59:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:59:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:59:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:59:03] 2.13.2.0 2533812 130413 320060 151653 0 459 30975697 32935936 42976 16776704 0 376945908 99.700 281671653 19865 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 03:59:03] CVMFS is ok
[2025-10-13 03:59:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:59:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:59:03] Further information can be found at the LHC@home message board.
[2025-10-13 03:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:59:03] Checking for apptainer binary...
[2025-10-13 03:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:59:03] Running /usr/bin/apptainer --version
[2025-10-13 03:59:03] apptainer version 1.4.3-1.el9
[2025-10-13 03:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:59:04] c6-12-29-3.aglt2.org
[2025-10-13 03:59:04] apptainer works
[2025-10-13 03:59:04] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:59:04] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:59:04] Starting ATLAS job with PandaID=6842064917
[2025-10-13 03:59:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
07:40:10 (1828261): BOINC client no longer exists - exiting
07:40:10 (1828261): timer handler: client dead, exiting
07:49:52 (2637957): wrapper (7.7.26015): starting
07:49:52 (2637957): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 07:49:52] Arguments: --nthreads 8
[2025-10-13 07:49:52] Threads: 8
[2025-10-13 07:49:52] This job has been restarted, cleaning up previous attempt
[2025-10-13 07:49:52] Checking for CVMFS
[2025-10-13 07:49:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 07:49:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 07:49:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 07:49:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 07:49:54] 2.13.2.0 2533812 130643 314668 151660 2 176 32333052 32935936 32070 16776704 0 377692310 99.701 281711170 19864 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 07:49:54] CVMFS is ok
[2025-10-13 07:49:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 07:49:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 07:49:54] Further information can be found at the LHC@home message board.
[2025-10-13 07:49:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 07:49:54] Checking for apptainer binary...
[2025-10-13 07:49:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 07:49:54] Running /usr/bin/apptainer --version
[2025-10-13 07:49:55] apptainer version 1.4.3-1.el9
[2025-10-13 07:49:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 07:49:55] c6-12-29-3.aglt2.org
[2025-10-13 07:49:55] apptainer works
[2025-10-13 07:49:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 07:49:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 07:49:55] Starting ATLAS job with PandaID=6842064917
[2025-10-13 07:49:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 13:46:49]  *** The last 200 lines of the pilot log: ***
[2025-10-13 13:46:49] 2025-10-13 17:46:06,307 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 13:46:49] 2025-10-13 17:46:06,307 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 13:46:49] 2025-10-13 17:46:06,307 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 13:46:49] 2025-10-13 17:46:06,314 | INFO     | fitting pss+swap vs Time
[2025-10-13 13:46:49] 2025-10-13 17:46:06,315 | INFO     | sum of square deviations: 13068013060.988453
[2025-10-13 13:46:49] 2025-10-13 17:46:06,318 | INFO     | sum of deviations: 86138923349.8046
[2025-10-13 13:46:49] 2025-10-13 17:46:06,319 | INFO     | mean x: 1760366912.8390806
[2025-10-13 13:46:49] 2025-10-13 17:46:06,319 | INFO     | mean y: 2120883.014367816
[2025-10-13 13:46:49] 2025-10-13 17:46:06,319 | INFO     | -- intersect: -11601487857.265547
[2025-10-13 13:46:49] 2025-10-13 17:46:06,319 | INFO     | intersect: -11601487857.265547
[2025-10-13 13:46:49] 2025-10-13 17:46:06,320 | INFO     | chi2: 2.278103351124857
[2025-10-13 13:46:49] 2025-10-13 17:46:06,320 | INFO     | sum of square deviations: 12512820035.405258
[2025-10-13 13:46:49] 2025-10-13 17:46:06,324 | INFO     | sum of deviations: 87621449889.43152
[2025-10-13 13:46:49] 2025-10-13 17:46:06,325 | INFO     | mean x: 1760366760.3440232
[2025-10-13 13:46:49] 2025-10-13 17:46:06,325 | INFO     | mean y: 2121285.0641399417
[2025-10-13 13:46:49] 2025-10-13 17:46:06,325 | INFO     | -- intersect: -12324907109.978952
[2025-10-13 13:46:49] 2025-10-13 17:46:06,325 | INFO     | intersect: -12324907109.978952
[2025-10-13 13:46:49] 2025-10-13 17:46:06,325 | INFO     | chi2: 2.2678440289346025
[2025-10-13 13:46:49] 2025-10-13 17:46:06,326 | INFO     | current chi2=2.2678440289346025 (change=0.4503448970034111 %)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,326 | INFO     | right removable region: 342
[2025-10-13 13:46:49] 2025-10-13 17:46:06,326 | INFO     | sum of square deviations: 12512748055.405254
[2025-10-13 13:46:49] 2025-10-13 17:46:06,329 | INFO     | sum of deviations: 21538572365.434406
[2025-10-13 13:46:49] 2025-10-13 17:46:06,330 | INFO     | mean x: 1760367065.3440232
[2025-10-13 13:46:49] 2025-10-13 17:46:06,330 | INFO     | mean y: 2138566.699708455
[2025-10-13 13:46:49] 2025-10-13 17:46:06,330 | INFO     | -- intersect: -3028034602.195895
[2025-10-13 13:46:49] 2025-10-13 17:46:06,331 | INFO     | intersect: -3028034602.195895
[2025-10-13 13:46:49] 2025-10-13 17:46:06,331 | INFO     | chi2: 0.2925987517989042
[2025-10-13 13:46:49] 2025-10-13 17:46:06,332 | INFO     | current chi2=0.2925987517989042 (change=87.15603698776758 %)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,332 | INFO     | sum of square deviations: 11973457881.999912
[2025-10-13 13:46:49] 2025-10-13 17:46:06,335 | INFO     | sum of deviations: 1378451096.9230745
[2025-10-13 13:46:49] 2025-10-13 17:46:06,335 | INFO     | mean x: 1760367217.8461537
[2025-10-13 13:46:49] 2025-10-13 17:46:06,336 | INFO     | mean y: 2144264.1331360945
[2025-10-13 13:46:49] 2025-10-13 17:46:06,336 | INFO     | -- intersect: -200519005.43708622
[2025-10-13 13:46:49] 2025-10-13 17:46:06,336 | INFO     | intersect: -200519005.43708622
[2025-10-13 13:46:49] 2025-10-13 17:46:06,336 | INFO     | chi2: 0.1274766513560055
[2025-10-13 13:46:49] 2025-10-13 17:46:06,337 | INFO     | current chi2=0.1274766513560055 (change=56.43294765535535 %)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,337 | INFO     | sum of square deviations: 11449868193.891832
[2025-10-13 13:46:49] 2025-10-13 17:46:06,340 | INFO     | sum of deviations: -1329995108.7297304
[2025-10-13 13:46:49] 2025-10-13 17:46:06,340 | INFO     | mean x: 1760367370.3513513
[2025-10-13 13:46:49] 2025-10-13 17:46:06,340 | INFO     | mean y: 2145047.732732733
[2025-10-13 13:46:49] 2025-10-13 17:46:06,340 | INFO     | -- intersect: 206626003.53829557
[2025-10-13 13:46:49] 2025-10-13 17:46:06,341 | INFO     | intersect: 206626003.53829557
[2025-10-13 13:46:49] 2025-10-13 17:46:06,341 | INFO     | chi2: 0.11910439960404252
[2025-10-13 13:46:49] 2025-10-13 17:46:06,341 | INFO     | current chi2=0.11910439960404252 (change=6.5676746783861555 %)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,341 | INFO     | left removable region: 30
[2025-10-13 13:46:49] 2025-10-13 17:46:06,342 | INFO     | sum of square deviations: 9417384241.07373
[2025-10-13 13:46:49] 2025-10-13 17:46:06,345 | INFO     | sum of deviations: -741956194.59936
[2025-10-13 13:46:49] 2025-10-13 17:46:06,346 | INFO     | mean x: 1760367644.8621795
[2025-10-13 13:46:49] 2025-10-13 17:46:06,346 | INFO     | mean y: 2146913.3814102565
[2025-10-13 13:46:49] 2025-10-13 17:46:06,346 | INFO     | -- intersect: 140838894.66228265
[2025-10-13 13:46:49] 2025-10-13 17:46:06,346 | INFO     | intersect: 140838894.66228265
[2025-10-13 13:46:49] 2025-10-13 17:46:06,346 | INFO     | chi2: 0.10391015244009297
[2025-10-13 13:46:49] 2025-10-13 17:46:06,347 | INFO     | -- intersect: 140838894.66228265
[2025-10-13 13:46:49] 2025-10-13 17:46:06,347 | INFO     | current memory leak: -0.08 B/s (using 312 data points, chi2=0.10)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,348 | INFO     | could have reported an average CPU frequency of 2532 MHz (15 samples)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | ..............................
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . Timing measurements:
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . get job = 0 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . initial setup = 3 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . payload setup = 23 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . stage-in = 0 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . payload execution = 21245 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . stage-out = 2 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | . log creation = 0 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,349 | INFO     | ..............................
[2025-10-13 13:46:49] 2025-10-13 17:46:06,675 | INFO     | 
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | job summary report
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | --------------------------------------------------
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | PanDA job id: 6842064917
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | task id: 46676269
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | errors: (none)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | pilot state: finished 
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | transexitcode: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | exeerrorcode: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | exeerrordiag: 
[2025-10-13 13:46:49] 2025-10-13 17:46:06,676 | INFO     | exitcode: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | exitmsg: OK
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | cpuconsumptiontime: 47516 s
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | nevents: 400
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | neventsw: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | pid: 2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | pgrp: 2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:06,677 | INFO     | corecount: 8
[2025-10-13 13:46:49] 2025-10-13 17:46:06,678 | INFO     | event service: False
[2025-10-13 13:46:49] 2025-10-13 17:46:06,678 | INFO     | sizes: {0: 2348580, 1: 2348835, 2: 2348863, 13: 2348863, 19: 2349181, 23: 2349209, 21272: 2382871, 21275: 2391869, 21278: 2391925, 21290: 2392119}
[2025-10-13 13:46:49] 2025-10-13 17:46:06,678 | INFO     | --------------------------------------------------
[2025-10-13 13:46:49] 2025-10-13 17:46:06,678 | INFO     | 
[2025-10-13 13:46:49] 2025-10-13 17:46:06,678 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 13:46:49] 2025-10-13 17:46:06,705 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,706 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 13:46:49] 2025-10-13 17:46:06,709 | INFO     | job 6842064917 has completed (purged errors)
[2025-10-13 13:46:49] 2025-10-13 17:46:06,709 | INFO     | overall cleanup function is called
[2025-10-13 13:46:49] 2025-10-13 17:46:07,719 | INFO     | --- collectZombieJob: --- 10, [2690960]
[2025-10-13 13:46:49] 2025-10-13 17:46:07,720 | INFO     | zombie collector waiting for pid 2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:07,721 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 13:46:49] 2025-10-13 17:46:07,721 | INFO     | collected zombie processes
[2025-10-13 13:46:49] 2025-10-13 17:46:07,721 | INFO     | will attempt to kill all subprocesses of pid=2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:08,258 | INFO     | process IDs to be killed: [2690960] (in reverse order)
[2025-10-13 13:46:49] 2025-10-13 17:46:08,414 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 13:46:49] 2025-10-13 17:46:08,414 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 13:46:49] 2025-10-13 17:46:08,445 | INFO     | did not find any defunct processes belonging to 2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:08,468 | INFO     | did not find any defunct processes belonging to 2690960
[2025-10-13 13:46:49] 2025-10-13 17:46:08,468 | INFO     | ready for new job
[2025-10-13 13:46:49] 2025-10-13 17:46:08,469 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 13:46:49] 2025-10-13 17:46:08,472 | INFO     | ***************************************
[2025-10-13 13:46:49] 2025-10-13 17:46:08,472 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 13:46:49] 2025-10-13 17:46:08,472 | INFO     | ***************************************
[2025-10-13 13:46:49] 2025-10-13 17:46:08,472 | INFO     | 
[2025-10-13 13:46:49] 2025-10-13 17:46:08,483 | INFO     | architecture information:
[2025-10-13 13:46:49] 2025-10-13 17:46:08,483 | INFO     | executing command: cat /etc/os-release
[2025-10-13 13:46:49] 2025-10-13 17:46:08,524 | INFO     | cat /etc/os-release:
[2025-10-13 13:46:49] NAME="CentOS Linux"
[2025-10-13 13:46:49] VERSION="7 (Core)"
[2025-10-13 13:46:49] ID="centos"
[2025-10-13 13:46:49] ID_LIKE="rhel fedora"
[2025-10-13 13:46:49] VERSION_ID="7"
[2025-10-13 13:46:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 13:46:49] ANSI_COLOR="0;31"
[2025-10-13 13:46:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 13:46:49] HOME_URL="https://www.centos.org/"
[2025-10-13 13:46:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 13:46:49] 
[2025-10-13 13:46:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 13:46:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 13:46:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 13:46:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 13:46:49] 
[2025-10-13 13:46:49] 2025-10-13 17:46:08,525 | INFO     | ***************************************
[2025-10-13 13:46:49] 2025-10-13 17:46:09,028 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 13:46:49] 2025-10-13 17:46:09,057 | INFO     | sufficient remaining disk space (94817484800 B)
[2025-10-13 13:46:49] 2025-10-13 17:46:09,057 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 13:46:49] 2025-10-13 17:46:09,058 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 13:46:49] 2025-10-13 17:46:09,058 | INFO     | update_server=False
[2025-10-13 13:46:49] 2025-10-13 17:46:09,058 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 13:46:49] 2025-10-13 17:46:09,058 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:46:49] 2025-10-13 17:46:09,058 | INFO     | aborting loop
[2025-10-13 13:46:49] 2025-10-13 17:46:09,314 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 13:46:49] 2025-10-13 17:46:09,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 13:46:49] 2025-10-13 17:46:09,495 | INFO     | all payload control threads have been joined
[2025-10-13 13:46:49] 2025-10-13 17:46:09,512 | INFO     | all data control threads have been joined
[2025-10-13 13:46:49] 2025-10-13 17:46:10,064 | INFO     | [job] retrieve thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,065 | INFO     | [job] job monitor thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,150 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,276 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,385 | INFO     | all job control threads have been joined
[2025-10-13 13:46:49] 2025-10-13 17:46:10,527 | INFO     | [payload] control thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,528 | INFO     | [data] control thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,679 | INFO     | [job] validate thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,809 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,906 | INFO     | [payload] validate_post thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:10,999 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:11,249 | INFO     | [payload] failed_post thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:11,391 | INFO     | [job] control thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:11,441 | INFO     | [data] copytool_out thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:11,478 | INFO     | [data] copytool_in thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:11,479 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 13:46:49] 2025-10-13 17:46:12,485 | INFO     | [job] queue monitor thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:13,072 | INFO     | [monitor] cgroup control has ended
[2025-10-13 13:46:49] 2025-10-13 17:46:13,322 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 13:46:49] 2025-10-13 17:46:13,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139970698422080)>', '<ExcThread(monitor, started 139969746163456)>']
[2025-10-13 13:46:49] 2025-10-13 17:46:18,538 | INFO     | all workflow threads have been joined
[2025-10-13 13:46:49] 2025-10-13 17:46:18,538 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 13:46:49] 2025-10-13 17:46:18,538 | INFO     | traces error code: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:18,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 13:46:49] 2025-10-13 17:46:38,670 | INFO     | PID=2658116 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 13:46:49] 2025-10-13 17:46:38,671 | INFO     | .. there are 34 such processes running
[2025-10-13 13:46:49] 2025-10-13 17:46:38,675 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 13:46:49] 2025-10-13 17:46:38,675 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 13:46:49] 2025-10-13 17:46:38,675 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 13:46:49] 2025-10-13 17:46:38,675 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 13:46:49] 2025-10-13 17:46:38,676 | INFO     | [monitor] control thread has ended
[2025-10-13 13:46:49] 2025-10-13 17:46:38,937 [wrapper] ==== pilot stdout END ====
[2025-10-13 13:46:49] 2025-10-13 17:46:38,948 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 13:46:49] 2025-10-13 17:46:38,963 [wrapper] pilotpid: 2658116
[2025-10-13 13:46:49] 2025-10-13 17:46:38,977 [wrapper] Pilot exit status: 0
[2025-10-13 13:46:49] 2025-10-13 17:46:39,079 [wrapper] pandaids: 6842064917 6842064917
[2025-10-13 13:46:49] 2025-10-13 17:46:39,244 [wrapper] cleanup supervisor_pilot 3770881 2658117
[2025-10-13 13:46:49] 2025-10-13 17:46:39,250 [wrapper] Test setup, not cleaning
[2025-10-13 13:46:49] 2025-10-13 17:46:39,254 [wrapper] apfmon messages muted
[2025-10-13 13:46:49] 2025-10-13 17:46:39,258 [wrapper] ==== wrapper stdout END ====
[2025-10-13 13:46:49] 2025-10-13 17:46:39,262 [wrapper] ==== wrapper stderr END ====
[2025-10-13 13:46:49]  *** Error codes and diagnostics ***
[2025-10-13 13:46:49]     "exeErrorCode": 0,
[2025-10-13 13:46:49]     "exeErrorDiag": "",
[2025-10-13 13:46:49]     "pilotErrorCode": 0,
[2025-10-13 13:46:49]     "pilotErrorDiag": "",
[2025-10-13 13:46:49]  *** Listing of results directory ***
[2025-10-13 13:46:49] total 631236
[2025-10-13 13:46:49] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:23 queuedata.json
[2025-10-13 13:46:49] -rwx------. 1 boincer umatlas     36292 Oct 12 23:24 runpilot2-wrapper.sh
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 13:46:49] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:58 run_atlas
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:58 job.xml
[2025-10-13 13:46:49] -rw-r--r--. 3 boincer umatlas 220001236 Oct 13 03:59 EVNT.46676267._003792.pool.root.1
[2025-10-13 13:46:49] -rw-r--r--. 3 boincer umatlas 220001236 Oct 13 03:59 ATLAS.root_0
[2025-10-13 13:46:49] -rw-r--r--. 2 boincer umatlas    569689 Oct 13 03:59 input.tar.gz
[2025-10-13 13:46:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:59 start_atlas.sh
[2025-10-13 13:46:49] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:59 shared
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:59 boinc_lockfile
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 07:49 pandaJob.out
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas    972497 Oct 13 07:50 agis_schedconf.cvmfs.json
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas 196414599 Oct 13 13:45 HITS.46676269._095782.pool.root.1
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas      6860 Oct 13 13:45 init_data.xml
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas       531 Oct 13 13:45 boinc_task_state.xml
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas      1052 Oct 13 13:45 memory_monitor_summary.json
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas   1560580 Oct 13 13:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas    528947 Oct 13 13:45 log.46676269._095782.job.log.tgz.1
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas      7845 Oct 13 13:46 heartbeat.json
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas        28 Oct 13 13:46 wrapper_checkpoint.txt
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas        96 Oct 13 13:46 pilot_heartbeat.json
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas       823 Oct 13 13:46 pilotlog.txt
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas   2507919 Oct 13 13:46 log.46676269._095782.job.log.1
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas       357 Oct 13 13:46 output.list
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas       620 Oct 13 13:46 runtime_log
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas   3051520 Oct 13 13:46 result.tar.gz
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas      8799 Oct 13 13:46 runtime_log.err
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas       785 Oct 13 13:46 AQ6KDm4LOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmhcVMDm2JQvpn.diag
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 13:46 boinc_mmap_file
[2025-10-13 13:46:49] -rw-r--r--. 1 boincer umatlas     23316 Oct 13 13:46 stderr.txt
[2025-10-13 13:46:49] HITS file was successfully produced:
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas 196414599 Oct 13 13:45 shared/HITS.pool.root.1
[2025-10-13 13:46:49]  *** Contents of shared directory: ***
[2025-10-13 13:46:49] total 410220
[2025-10-13 13:46:49] -rw-r--r--. 3 boincer umatlas 220001236 Oct 13 03:59 ATLAS.root_0
[2025-10-13 13:46:49] -rw-r--r--. 2 boincer umatlas    569689 Oct 13 03:59 input.tar.gz
[2025-10-13 13:46:49] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:59 start_atlas.sh
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas 196414599 Oct 13 13:45 HITS.pool.root.1
[2025-10-13 13:46:49] -rw-------. 1 boincer umatlas   3051520 Oct 13 13:46 result.tar.gz
13:46:51 (2637957): run_atlas exited; CPU time 48607.277327
13:46:51 (2637957): called boinc_finish(0)

</stderr_txt>
]]>

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