Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:56:08 (28739): wrapper (7.7.26015): starting
03:56:08 (28739): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 03:56:08] Arguments: --nthreads 12
[2025-10-13 03:56:08] Threads: 12
[2025-10-13 03:56:08] Checking for CVMFS
[2025-10-13 03:56:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:56:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:56:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:56:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:56:08] 2.11.2.0 3009 9316 83756 151653 2 57 19444534 20275200 1 130560 0 9017548 99.993 311700 43771 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:56:08] CVMFS is ok
[2025-10-13 03:56:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:56:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:56:08] Further information can be found at the LHC@home message board.
[2025-10-13 03:56:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:56:08] Checking for apptainer binary...
[2025-10-13 03:56:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:56:08] Running /usr/bin/apptainer --version
[2025-10-13 03:56:08] apptainer version 1.3.2-1.el7
[2025-10-13 03:56:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:56:09] c-115-42.aglt2.org
[2025-10-13 03:56:09] apptainer works
[2025-10-13 03:56:09] Set ATHENA_PROC_NUMBER=12
[2025-10-13 03:56:09] Set ATHENA_CORE_NUMBER=12
[2025-10-13 03:56:09] Starting ATLAS job with PandaID=6841069130
[2025-10-13 03:56:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:02:35]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:02:35] 2025-10-13 09:01:57,579 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 05:02:35] 2025-10-13 09:01:57,579 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 05:02:35] 2025-10-13 09:01:57,580 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4240177 B
[2025-10-13 05:02:35] 2025-10-13 09:01:57,580 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16028 B
[2025-10-13 05:02:35] 2025-10-13 09:01:57,580 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:02:35] 2025-10-13 09:01:57,598 | INFO     | sufficient remaining disk space (18583912448 B)
[2025-10-13 05:02:35] 2025-10-13 09:01:57,598 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 05:02:35] 2025-10-13 09:01:57,599 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6841069130: 4535047 B (within 2537553920 B limit)
[2025-10-13 05:02:35] 2025-10-13 09:01:57,600 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6841069130/HITS.46676269._093339.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 05:02:35] 2025-10-13 09:01:57,600 | INFO     | total size of present files: 0 B (workdir size: 4535047 B)
[2025-10-13 05:02:35] 2025-10-13 09:01:57,600 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6841069130/HITS.46676269._093339.pool.root.1 since it does not exist
[2025-10-13 05:02:35] 2025-10-13 09:01:57,690 | INFO     | number of running child processes to parent process 6571: 1
[2025-10-13 05:02:35] 2025-10-13 09:01:57,690 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:02:35] 2025-10-13 09:01:57,756 | INFO     | time since job start (3933s) is within the limit (172800.0s)
[2025-10-13 05:02:35] 2025-10-13 09:01:58,739 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:02:35] 2025-10-13 09:01:59,766 | INFO     | time since job start (3935s) is within the limit (172800.0s)
[2025-10-13 05:02:35] 2025-10-13 09:02:00,193 | INFO     | monitor loop #294: job 0:6841069130 is in state 'finished'
[2025-10-13 05:02:35] 2025-10-13 09:02:00,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:02:35] 2025-10-13 09:02:01,214 | INFO     | job 6841069130 has state=finished
[2025-10-13 05:02:35] 2025-10-13 09:02:01,214 | INFO     | preparing for final server update for job 6841069130 in state='finished'
[2025-10-13 05:02:35] 2025-10-13 09:02:01,215 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:02:35] 2025-10-13 09:02:01,215 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:02:35] 2025-10-13 09:02:01,215 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:02:35] 2025-10-13 09:02:01,215 | INFO     | job 6841069130 has finished - writing final server update
[2025-10-13 05:02:35] 2025-10-13 09:02:01,216 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:02:35] 2025-10-13 09:02:01,216 | INFO     | executing command: lscpu
[2025-10-13 05:02:35] 2025-10-13 09:02:01,241 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:02:35] 2025-10-13 09:02:01,772 | INFO     | time since job start (3937s) is within the limit (172800.0s)
[2025-10-13 05:02:35] 2025-10-13 09:02:02,696 | INFO     | monitor loop #295: job 0:6841069130 is in state 'finished'
[2025-10-13 05:02:35] 2025-10-13 09:02:02,696 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:02:35] 2025-10-13 09:02:03,778 | INFO     | time since job start (3939s) is within the limit (172800.0s)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,199 | INFO     | monitor loop #296: job 0:6841069130 is in state 'finished'
[2025-10-13 05:02:35] 2025-10-13 09:02:05,199 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,623 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 05:02:35] 2025-10-13 09:02:05,626 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1773.4166666666667
[2025-10-13 05:02:35] 2025-10-13 09:02:05,628 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841069130/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,628 | INFO     | extracted standard info from prmon json
[2025-10-13 05:02:35] 2025-10-13 09:02:05,628 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:02:35] 2025-10-13 09:02:05,628 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:02:35] 2025-10-13 09:02:05,629 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:02:35] 2025-10-13 09:02:05,629 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:02:35] 2025-10-13 09:02:05,630 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:02:35] 2025-10-13 09:02:05,630 | INFO     | sum of square deviations: 57407588.0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | sum of deviations: -3072954055.9999995
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | mean x: 1760344225.0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | mean y: 2741484.0877192984
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | -- intersect: 94231694739.70833
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | intersect: 94231694739.70833
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | chi2: 0.0657071937041475
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | -- intersect: 94231694739.70833
[2025-10-13 05:02:35] 2025-10-13 09:02:05,631 | INFO     | current memory leak: -53.53 B/s (using 57 data points, chi2=0.07)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | could have reported an average CPU frequency of 2154 MHz (6 samples)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | ..............................
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . Timing measurements:
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . get job = 0 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . initial setup = 2 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . payload setup = 6 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . stage-in = 0 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . payload execution = 3903 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,632 | INFO     | . stage-out = 0 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,633 | INFO     | . log creation = 0 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,633 | INFO     | ..............................
[2025-10-13 05:02:35] 2025-10-13 09:02:05,783 | INFO     | time since job start (3941s) is within the limit (172800.0s)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | 
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | job summary report
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | --------------------------------------------------
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | PanDA job id: 6841069130
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | task id: 46676269
[2025-10-13 05:02:35] 2025-10-13 09:02:05,896 | INFO     | errors: (none)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | pilot state: finished 
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | transexitcode: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | exeerrorcode: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | exeerrordiag: 
[2025-10-13 05:02:35] 2025-10-13 09:02:05,897 | INFO     | exitcode: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | exitmsg: OK
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | cpuconsumptiontime: 41511 s
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | nevents: 400
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | neventsw: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | pid: 6571
[2025-10-13 05:02:35] 2025-10-13 09:02:05,898 | INFO     | pgrp: 6571
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | corecount: 12
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | event service: False
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 3914: 2374908, 3916: 2383906, 3919: 2383990, 3926: 2384312}
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | --------------------------------------------------
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | 
[2025-10-13 05:02:35] 2025-10-13 09:02:05,899 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:02:35] 2025-10-13 09:02:05,925 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,925 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,925 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,925 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,926 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,926 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,926 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,926 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,926 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,927 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:02:35] 2025-10-13 09:02:05,928 | INFO     | job 6841069130 has completed (purged errors)
[2025-10-13 05:02:35] 2025-10-13 09:02:05,929 | INFO     | overall cleanup function is called
[2025-10-13 05:02:35] 2025-10-13 09:02:06,937 | INFO     | --- collectZombieJob: --- 10, [6571]
[2025-10-13 05:02:35] 2025-10-13 09:02:06,937 | INFO     | zombie collector waiting for pid 6571
[2025-10-13 05:02:35] 2025-10-13 09:02:06,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:02:35] 2025-10-13 09:02:06,945 | INFO     | collected zombie processes
[2025-10-13 05:02:35] 2025-10-13 09:02:06,945 | INFO     | will attempt to kill all subprocesses of pid=6571
[2025-10-13 05:02:35] 2025-10-13 09:02:07,037 | INFO     | process IDs to be killed: [6571] (in reverse order)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,082 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,082 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:02:35] 2025-10-13 09:02:07,086 | INFO     | did not find any defunct processes belonging to 6571
[2025-10-13 05:02:35] 2025-10-13 09:02:07,088 | INFO     | did not find any defunct processes belonging to 6571
[2025-10-13 05:02:35] 2025-10-13 09:02:07,088 | INFO     | ready for new job
[2025-10-13 05:02:35] 2025-10-13 09:02:07,088 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:02:35] 2025-10-13 09:02:07,089 | INFO     | ***************************************
[2025-10-13 05:02:35] 2025-10-13 09:02:07,089 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:02:35] 2025-10-13 09:02:07,089 | INFO     | ***************************************
[2025-10-13 05:02:35] 2025-10-13 09:02:07,089 | INFO     | 
[2025-10-13 05:02:35] 2025-10-13 09:02:07,090 | INFO     | architecture information:
[2025-10-13 05:02:35] 2025-10-13 09:02:07,090 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:02:35] 2025-10-13 09:02:07,105 | INFO     | cat /etc/os-release:
[2025-10-13 05:02:35] NAME="CentOS Linux"
[2025-10-13 05:02:35] VERSION="7 (Core)"
[2025-10-13 05:02:35] ID="centos"
[2025-10-13 05:02:35] ID_LIKE="rhel fedora"
[2025-10-13 05:02:35] VERSION_ID="7"
[2025-10-13 05:02:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:02:35] ANSI_COLOR="0;31"
[2025-10-13 05:02:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:02:35] HOME_URL="https://www.centos.org/"
[2025-10-13 05:02:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:02:35] 
[2025-10-13 05:02:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:02:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:02:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:02:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:02:35] 
[2025-10-13 05:02:35] 2025-10-13 09:02:07,106 | INFO     | ***************************************
[2025-10-13 05:02:35] 2025-10-13 09:02:07,609 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:02:35] 2025-10-13 09:02:07,628 | INFO     | sufficient remaining disk space (18589155328 B)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,628 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:02:35] 2025-10-13 09:02:07,628 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:02:35] 2025-10-13 09:02:07,629 | INFO     | update_server=False
[2025-10-13 05:02:35] 2025-10-13 09:02:07,629 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,629 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:02:35] 2025-10-13 09:02:07,629 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,630 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:02:35] 2025-10-13 09:02:07,630 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:02:35] 2025-10-13 09:02:07,630 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:02:35] 2025-10-13 09:02:07,701 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:02:35] 2025-10-13 09:02:07,701 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:02:35] 2025-10-13 09:02:07,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:02:35] 2025-10-13 09:02:07,701 | INFO     | will abort loop
[2025-10-13 05:02:35] 2025-10-13 09:02:07,983 | INFO     | all data control threads have been joined
[2025-10-13 05:02:35] 2025-10-13 09:02:08,156 | INFO     | all job control threads have been joined
[2025-10-13 05:02:35] 2025-10-13 09:02:08,634 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:08,635 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:08,707 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:08,764 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:08,951 | INFO     | all payload control threads have been joined
[2025-10-13 05:02:35] 2025-10-13 09:02:08,988 | INFO     | [data] control thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:08,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:02:35] 2025-10-13 09:02:09,067 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,077 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,082 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,162 | INFO     | [job] control thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,325 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:02:35] 2025-10-13 09:02:09,378 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,754 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,956 | INFO     | [payload] control thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:09,989 | INFO     | [job] validate thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:11,000 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:13,330 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:18,367 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:02:35] 2025-10-13 09:02:19,369 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:02:35] 2025-10-13 09:02:29,990 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:02:35] 2025-10-13 09:02:30,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140264359335744)>', '<ExcThread(monitor, started 140264060462848)>']
[2025-10-13 05:02:35] 2025-10-13 09:02:30,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:02:35] 2025-10-13 09:02:30,748 | INFO     | [monitor] control thread has ended
[2025-10-13 05:02:35] 2025-10-13 09:02:35,660 | INFO     | all workflow threads have been joined
[2025-10-13 05:02:35] 2025-10-13 09:02:35,660 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:02:35] 2025-10-13 09:02:35,660 | INFO     | traces error code: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:35,663 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:02:35] 2025-10-13 09:02:35,747 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:02:35] 2025-10-13 09:02:35,751 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:02:35] 2025-10-13 09:02:35,754 [wrapper] pilotpid: 32415
[2025-10-13 05:02:35] 2025-10-13 09:02:35,757 [wrapper] Pilot exit status: 0
[2025-10-13 05:02:35] 2025-10-13 09:02:35,774 [wrapper] pandaids: 6841069130
[2025-10-13 05:02:35] 2025-10-13 09:02:35,812 [wrapper] cleanup supervisor_pilot  2959 32416
[2025-10-13 05:02:35] 2025-10-13 09:02:35,816 [wrapper] Test setup, not cleaning
[2025-10-13 05:02:35] 2025-10-13 09:02:35,820 [wrapper] apfmon messages muted
[2025-10-13 05:02:35] 2025-10-13 09:02:35,823 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:02:35] 2025-10-13 09:02:35,827 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:02:35]  *** Error codes and diagnostics ***
[2025-10-13 05:02:35]     "exeErrorCode": 0,
[2025-10-13 05:02:35]     "exeErrorDiag": "",
[2025-10-13 05:02:35]     "pilotErrorCode": 0,
[2025-10-13 05:02:35]     "pilotErrorDiag": "",
[2025-10-13 05:02:35]  *** Listing of results directory ***
[2025-10-13 05:02:35] total 407268
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:39 queuedata.json
[2025-10-13 05:02:35] -rwx------ 1 boincer umatlas     36292 Oct 12 20:39 runpilot2-wrapper.sh
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas       100 Oct 13 03:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:02:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 03:56 run_atlas
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas       105 Oct 13 03:56 job.xml
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas 222357721 Oct 13 03:56 EVNT.46676267._004700.pool.root.1
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:56 start_atlas.sh
[2025-10-13 05:02:35] drwxrwx--x 2 boincer umatlas      4096 Oct 13 03:56 shared
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 03:56 input.tar.gz
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas         0 Oct 13 03:56 boinc_lockfile
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 03:56 pandaJob.out
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas    972849 Oct 13 03:56 agis_schedconf.cvmfs.json
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas   1560580 Oct 13 03:56 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:02:35] drwx------ 5 boincer umatlas      4096 Oct 13 03:56 pilot3
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas      5954 Oct 13 04:56 init_data.xml
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas        95 Oct 13 05:01 pilot_heartbeat.json
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas 188868951 Oct 13 05:01 HITS.46676269._093339.pool.root.1
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas      1049 Oct 13 05:01 memory_monitor_summary.json
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas    378211 Oct 13 05:01 log.46676269._093339.job.log.tgz.1
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas       529 Oct 13 05:02 boinc_task_state.xml
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas      7851 Oct 13 05:02 heartbeat.json
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 05:02 boinc_mmap_file
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas        27 Oct 13 05:02 wrapper_checkpoint.txt
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas      4810 Oct 13 05:02 pilotlog.txt
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas    580244 Oct 13 05:02 log.46676269._093339.job.log.1
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas       357 Oct 13 05:02 output.list
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas       620 Oct 13 05:02 runtime_log
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas    972800 Oct 13 05:02 result.tar.gz
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 05:02 runtime_log.err
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas       659 Oct 13 05:02 4dCODm1lLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsDmNDmVpUJTo.diag
[2025-10-13 05:02:35] -rw-r--r-- 1 boincer umatlas     22219 Oct 13 05:02 stderr.txt
[2025-10-13 05:02:35] HITS file was successfully produced:
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas 188868951 Oct 13 05:01 shared/HITS.pool.root.1
[2025-10-13 05:02:35]  *** Contents of shared directory: ***
[2025-10-13 05:02:35] total 403128
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas 222357721 Oct 13 03:56 ATLAS.root_0
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:56 start_atlas.sh
[2025-10-13 05:02:35] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 03:56 input.tar.gz
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas 188868951 Oct 13 05:01 HITS.pool.root.1
[2025-10-13 05:02:35] -rw------- 1 boincer umatlas    972800 Oct 13 05:02 result.tar.gz
05:02:37 (28739): run_atlas exited; CPU time 41508.005912
05:02:37 (28739): called boinc_finish(0)

</stderr_txt>
]]>

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