Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:40:44 (4115282): wrapper (7.7.26015): starting
10:40:44 (4115282): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 10:40:44] Arguments: --nthreads 2
[2025-10-13 10:40:44] Threads: 2
[2025-10-13 10:40:44] Checking for CVMFS
[2025-10-13 10:40:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:40:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:40:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:40:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:40:45] 2.11.0.0 3940285 50 44488 151654 1 186 2456326 4194305 0 130560 0 546630 99.999 2726 981 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:40:45] CVMFS is ok
[2025-10-13 10:40:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:40:45] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:40:45] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:40:45] Further information can be found at the LHC@home message board.
[2025-10-13 10:40:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:40:45] Checking for apptainer binary...
[2025-10-13 10:40:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:40:45] Running /usr/bin/apptainer --version
[2025-10-13 10:40:46] apptainer version 1.2.2-1.el8
[2025-10-13 10:40:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:40:46] bottom
[2025-10-13 10:40:46] apptainer works
[2025-10-13 10:40:46] Set ATHENA_PROC_NUMBER=2
[2025-10-13 10:40:46] Set ATHENA_CORE_NUMBER=2
[2025-10-13 10:40:46] Starting ATLAS job with PandaID=6841909402
[2025-10-13 10:40:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 10:47:26]  *** The last 200 lines of the pilot log: ***
[2025-10-13 10:47:26] 2025-10-13 08:46:54,133 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1567.394
[2025-10-13 10:47:26] 2025-10-13 08:46:54,134 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/memory_monitor_output.txt
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | INFO     | memory summary dictionary not yet available
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | could have reported an average CPU frequency of 1773 MHz (4 samples)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . Timing measurements:
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . get job = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . initial setup = 2 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . payload setup = 8 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-in = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . payload execution = 132 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-out = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . log creation = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 10:47:26] 2025-10-13 08:46:54,138 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/pilotlog.txt
[2025-10-13 10:47:26] 2025-10-13 08:46:54,156 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-13 10:47:26] - Log from pilotlog.txt -
[2025-10-13 10:47:26] 2025-10-13 08:46:52,881 | INFO     | time since job start (347s) is within the limit (172800.0s)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,120 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-13 10:47:26] 2025-10-13 08:46:54,133 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1567.394
[2025-10-13 10:47:26] 2025-10-13 08:46:54,134 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/memory_monitor_output.txt
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | INFO     | memory summary dictionary not yet available
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | could have reported an average CPU frequency of 1773 MHz (4 samples)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . Timing measurements:
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . get job = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . initial setup = 2 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . payload setup = 8 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-in = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . payload execution = 132 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-out = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . log creation = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 10:47:26] 2025-10-13 08:46:54,138 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/pilotlog.txt
[2025-10-13 10:47:26] 2025-10-13 08:46:54,156 | WARNING  | 
[2025-10-13 10:47:26] [begin log extracts]
[2025-10-13 10:47:26] - Log from pilotlog.txt -
[2025-10-13 10:47:26] 2025-10-13 08:46:52,881 | INFO     | time since job start (347s) is within the limit (172800.0s)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,120 | INFO     | CPU arch script returned: x86-64-v1
[2025-10-13 10:47:26] 2025-10-13 08:46:54,133 | INFO     | found 2 cores (2 cores per socket, 1 socket) , CPU MHz: 1567.394
[2025-10-13 10:47:26] 2025-10-13 08:46:54,134 | WARNING  | file does not exist either: /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/memory_monitor_output.txt
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | INFO     | memory summary dictionary not yet available
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 10:47:26] 2025-10-13 08:46:54,135 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | could have reported an average CPU frequency of 1773 MHz (4 samples)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . Timing measurements:
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . get job = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . initial setup = 2 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,136 | INFO     | . payload setup = 8 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-in = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . payload execution = 132 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . stage-out = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | . log creation = 0 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | ..............................
[2025-10-13 10:47:26] 2025-10-13 08:46:54,137 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-13 10:47:26] 2025-10-13 08:46:54,138 | INFO     | executing command: tail -n 20 /var/lib/boinc/slots/3/PanDA_Pilot-6841909402/pilotlog.txt
[2025-10-13 10:47:26] [end log extracts]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,156 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,157 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-13 10:47:26] 2025-10-13 08:46:54,277 | INFO     | 
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | job summary report
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | --------------------------------------------------
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | PanDA job id: 6841909402
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | task id: 46676269
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-13 10:43:39,653 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 10:47:26] 2025-10-13 08:46:54,278 | INFO     | pilot state: failed 
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | transexitcode: 65
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | exeerrorcode: 65
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | exeerrordiag: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | exitcode: 65
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | exitmsg: EVNTtoHITS got a SIGILL signal (exit code 132)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | cpuconsumptiontime: 154 s
[2025-10-13 10:47:26] 2025-10-13 08:46:54,279 | INFO     | nevents: 0
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | neventsw: 0
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | pid: 4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | pgrp: 4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | corecount: 2
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | event service: False
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | sizes: {0: 2348857, 1: 2348857, 7: 2349147, 11: 2349175, 205: 2372496, 207: 2376791, 210: 2376975, 331: 2377141}
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | --------------------------------------------------
[2025-10-13 10:47:26] 2025-10-13 08:46:54,280 | INFO     | 
[2025-10-13 10:47:26] 2025-10-13 08:46:54,281 | INFO     | executing command: ls -lF /var/lib/boinc/slots/3
[2025-10-13 10:47:26] 2025-10-13 08:46:54,306 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,307 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,307 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,307 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,307 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,307 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,308 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,309 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 10:47:26] 2025-10-13 08:46:54,310 | INFO     | job 6841909402 has completed (purged errors)
[2025-10-13 10:47:26] 2025-10-13 08:46:54,310 | INFO     | overall cleanup function is called
[2025-10-13 10:47:26] 2025-10-13 08:46:55,317 | INFO     | --- collectZombieJob: --- 10, [4125400]
[2025-10-13 10:47:26] 2025-10-13 08:46:55,318 | INFO     | zombie collector waiting for pid 4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:55,318 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 10:47:26] 2025-10-13 08:46:55,318 | INFO     | collected zombie processes
[2025-10-13 10:47:26] 2025-10-13 08:46:55,318 | INFO     | will attempt to kill all subprocesses of pid=4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:55,393 | INFO     | process IDs to be killed: [4125400] (in reverse order)
[2025-10-13 10:47:26] 2025-10-13 08:46:55,438 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 10:47:26] 2025-10-13 08:46:55,439 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 10:47:26] 2025-10-13 08:46:55,442 | INFO     | did not find any defunct processes belonging to 4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:55,445 | INFO     | did not find any defunct processes belonging to 4125400
[2025-10-13 10:47:26] 2025-10-13 08:46:55,446 | INFO     | ready for new job
[2025-10-13 10:47:26] 2025-10-13 08:46:55,446 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 10:47:26] 2025-10-13 08:46:55,448 | INFO     | ***************************************
[2025-10-13 10:47:26] 2025-10-13 08:46:55,448 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 10:47:26] 2025-10-13 08:46:55,448 | INFO     | ***************************************
[2025-10-13 10:47:26] 2025-10-13 08:46:55,448 | INFO     | 
[2025-10-13 10:47:26] 2025-10-13 08:46:55,460 | INFO     | architecture information:
[2025-10-13 10:47:26] 2025-10-13 08:46:55,460 | INFO     | executing command: cat /etc/os-release
[2025-10-13 10:47:26] 2025-10-13 08:46:55,479 | INFO     | cat /etc/os-release:
[2025-10-13 10:47:26] NAME="CentOS Linux"
[2025-10-13 10:47:26] VERSION="7 (Core)"
[2025-10-13 10:47:26] ID="centos"
[2025-10-13 10:47:26] ID_LIKE="rhel fedora"
[2025-10-13 10:47:26] VERSION_ID="7"
[2025-10-13 10:47:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 10:47:26] ANSI_COLOR="0;31"
[2025-10-13 10:47:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 10:47:26] HOME_URL="https://www.centos.org/"
[2025-10-13 10:47:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 10:47:26] 
[2025-10-13 10:47:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 10:47:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 10:47:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 10:47:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 10:47:26] 
[2025-10-13 10:47:26] 2025-10-13 08:46:55,480 | INFO     | ***************************************
[2025-10-13 10:47:26] 2025-10-13 08:46:55,983 | INFO     | executing command: df -mP /var/lib/boinc/slots/3
[2025-10-13 10:47:26] 2025-10-13 08:46:56,002 | INFO     | sufficient remaining disk space (214086713344 B)
[2025-10-13 10:47:26] 2025-10-13 08:46:56,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 10:47:26] 2025-10-13 08:46:56,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 10:47:26] 2025-10-13 08:46:56,003 | INFO     | update_server=False
[2025-10-13 10:47:26] 2025-10-13 08:46:56,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 10:47:26] 2025-10-13 08:46:56,003 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:47:26] 2025-10-13 08:46:56,003 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 10:47:26] 2025-10-13 08:46:56,004 | INFO     | aborting loop
[2025-10-13 10:47:26] 2025-10-13 08:46:56,004 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 10:47:26] 2025-10-13 08:46:56,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 10:47:26] 2025-10-13 08:46:56,484 | INFO     | all payload control threads have been joined
[2025-10-13 10:47:26] 2025-10-13 08:46:56,890 | INFO     | all data control threads have been joined
[2025-10-13 10:47:26] 2025-10-13 08:46:57,009 | INFO     | [job] retrieve thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,009 | INFO     | [job] job monitor thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,009 | INFO     | [job] queue monitor thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,011 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,041 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,235 | INFO     | all job control threads have been joined
[2025-10-13 10:47:26] 2025-10-13 08:46:57,280 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,487 | INFO     | [payload] failed_post thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,490 | INFO     | [payload] control thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,688 | INFO     | [data] copytool_in thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:57,891 | INFO     | [data] control thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:58,009 | INFO     | [data] copytool_out thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:58,051 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:58,240 | INFO     | [job] control thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:58,313 | INFO     | [job] validate thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:46:58,525 | INFO     | [payload] validate_post thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:47:00,010 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 10:47:26] 2025-10-13 08:47:05,067 | INFO     | [monitor] cgroup control has ended
[2025-10-13 10:47:26] 2025-10-13 08:47:06,704 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140286711453504)>', '<ExcThread(monitor, started 140285870843648)>']
[2025-10-13 10:47:26] 2025-10-13 08:47:11,707 | INFO     | all workflow threads have been joined
[2025-10-13 10:47:26] 2025-10-13 08:47:11,708 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 10:47:26] 2025-10-13 08:47:11,708 | INFO     | traces error code: 0
[2025-10-13 10:47:26] 2025-10-13 08:47:11,708 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 10:47:26] 2025-10-13 08:47:26,048 | INFO     | PID=4118904 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 10:47:26] 2025-10-13 08:47:26,050 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 10:47:26] 2025-10-13 08:47:26,050 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 10:47:26] 2025-10-13 08:47:26,050 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 10:47:26] 2025-10-13 08:47:26,050 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 10:47:26] 2025-10-13 08:47:26,050 | INFO     | [monitor] control thread has ended
[2025-10-13 10:47:26] 2025-10-13 08:47:26,202 [wrapper] ==== pilot stdout END ====
[2025-10-13 10:47:26] 2025-10-13 08:47:26,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 10:47:26] 2025-10-13 08:47:26,210 [wrapper] pilotpid: 4118904
[2025-10-13 10:47:26] 2025-10-13 08:47:26,213 [wrapper] Pilot exit status: 0
[2025-10-13 10:47:26] 2025-10-13 08:47:26,280 [wrapper] pandaids: 6841909402
[2025-10-13 10:47:26] 2025-10-13 08:47:26,306 [wrapper] cleanup supervisor_pilot 4118910 4118905
[2025-10-13 10:47:26] 2025-10-13 08:47:26,310 [wrapper] Test setup, not cleaning
[2025-10-13 10:47:26] 2025-10-13 08:47:26,313 [wrapper] apfmon messages muted
[2025-10-13 10:47:26] 2025-10-13 08:47:26,317 [wrapper] ==== wrapper stdout END ====
[2025-10-13 10:47:26] 2025-10-13 08:47:26,321 [wrapper] ==== wrapper stderr END ====
[2025-10-13 10:47:26]  *** Error codes and diagnostics ***
[2025-10-13 10:47:26]     "exeErrorCode": 65,
[2025-10-13 10:47:26]     "exeErrorDiag": "EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-13 10:47:26]     "pilotErrorCode": 1305,
[2025-10-13 10:47:26]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGILL signal (exit code 132)",
[2025-10-13 10:47:26]  *** Listing of results directory ***
[2025-10-13 10:47:26] total 218712
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc      5112 Oct 13 05:15 queuedata.json
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc    557409 Oct 13 05:15 pilot3.tar.gz
[2025-10-13 10:47:26] -rwx------ 1 boinc boinc     36292 Oct 13 05:15 runpilot2-wrapper.sh
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:40 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 10:47:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:40 run_atlas
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:40 job.xml
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc 219731801 Oct 13 10:40 EVNT.46676267._001501.pool.root.1
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc      5984 Oct 13 10:40 init_data.xml
[2025-10-13 10:47:26] drwxrwx--x 2 boinc boinc        68 Oct 13 10:40 shared
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:40 input.tar.gz
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:40 start_atlas.sh
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:40 boinc_lockfile
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:40 pandaJob.out
[2025-10-13 10:47:26] -rw------- 1 boinc boinc    972857 Oct 13 10:41 agis_schedconf.cvmfs.json
[2025-10-13 10:47:26] -rw------- 1 boinc boinc   1560580 Oct 13 10:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 10:47:26] drwx------ 5 boinc boinc      4096 Oct 13 10:41 pilot3
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc       524 Oct 13 10:43 boinc_task_state.xml
[2025-10-13 10:47:26] -rw------- 1 boinc boinc     45926 Oct 13 10:44 log.46676269._095613.job.log.tgz.1
[2025-10-13 10:47:26] -rw------- 1 boinc boinc      8060 Oct 13 10:46 heartbeat.json
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc      8192 Oct 13 10:47 boinc_mmap_file
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc        23 Oct 13 10:47 wrapper_checkpoint.txt
[2025-10-13 10:47:26] -rw------- 1 boinc boinc        95 Oct 13 10:47 pilot_heartbeat.json
[2025-10-13 10:47:26] -rw------- 1 boinc boinc       747 Oct 13 10:47 pilotlog.txt
[2025-10-13 10:47:26] -rw------- 1 boinc boinc    129544 Oct 13 10:47 log.46676269._095613.job.log.1
[2025-10-13 10:47:26] -rw------- 1 boinc boinc       188 Oct 13 10:47 output.list
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc       620 Oct 13 10:47 runtime_log
[2025-10-13 10:47:26] -rw------- 1 boinc boinc    194560 Oct 13 10:47 result.tar.gz
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc      8505 Oct 13 10:47 runtime_log.err
[2025-10-13 10:47:26] -rw------- 1 boinc boinc       636 Oct 13 10:47 3niNDm6COS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmZbVMDmAiBlWo.diag
[2025-10-13 10:47:26] -rw-r--r-- 1 boinc boinc     21895 Oct 13 10:47 stderr.txt
[2025-10-13 10:47:26] No HITS result produced
[2025-10-13 10:47:26]  *** Contents of shared directory: ***
[2025-10-13 10:47:26] total 215352
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc 219731801 Oct 13 10:40 ATLAS.root_0
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc    569682 Oct 13 10:40 input.tar.gz
[2025-10-13 10:47:26] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:40 start_atlas.sh
[2025-10-13 10:47:26] -rw------- 1 boinc boinc    194560 Oct 13 10:47 result.tar.gz
10:47:28 (4115282): run_atlas exited; CPU time 135.016210
10:47:28 (4115282): called boinc_finish(0)

</stderr_txt>
]]>

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