Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:59:51 (1921725): wrapper (7.7.26015): starting
03:59:51 (1921725): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:59:51] Arguments: --nthreads 8
[2025-10-13 03:59:51] Threads: 8
[2025-10-13 03:59:51] Checking for CVMFS
[2025-10-13 03:59:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:59:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:59:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:59:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:59:51] 2.13.2.0 9460 35400 232088 151653 3 188 31934898 32935937 2765 16776704 0 104139455 99.707 79619449 30073 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 03:59:51] CVMFS is ok
[2025-10-13 03:59:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:59:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:59:51] Further information can be found at the LHC@home message board.
[2025-10-13 03:59:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:59:51] Checking for apptainer binary...
[2025-10-13 03:59:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:59:51] Running /usr/bin/apptainer --version
[2025-10-13 03:59:51] apptainer version 1.4.3-1.el9
[2025-10-13 03:59:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:59:51] c-4-11.aglt2.org
[2025-10-13 03:59:51] apptainer works
[2025-10-13 03:59:51] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:59:51] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:59:51] Starting ATLAS job with PandaID=6841971310
[2025-10-13 03:59:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:28:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:28:16]  replicas=None
[2025-10-13 05:28:16]  scope=mc23_13p6TeV
[2025-10-13 05:28:16]  status=None
[2025-10-13 05:28:16]  status_code=0
[2025-10-13 05:28:16]  storage_token=
[2025-10-13 05:28:16]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6841971310/log.46676269._095659.job.log.tgz.1
[2025-10-13 05:28:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/6c/log.46676269._095659.job.log.tgz.1
[2025-10-13 05:28:16]  workdir=None
[2025-10-13 05:28:16] ]
[2025-10-13 05:28:16] 2025-10-13 09:27:26,960 | INFO     | transferring file log.46676269._095659.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6841971310/log.46676269._095659.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 05:28:16] 2025-10-13 09:27:26,960 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6841971310/log.46676269._095659.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._095659.job
[2025-10-13 05:28:16] 2025-10-13 09:27:26,976 | INFO     | adding to output.list: log.46676269._095659.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bf/6c/log.46676269._095659.job.log.tg
[2025-10-13 05:28:16] 2025-10-13 09:27:26,977 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:28:16] 2025-10-13 09:27:26,977 | INFO     | summary of transferred files:
[2025-10-13 05:28:16] 2025-10-13 09:27:26,978 | INFO     |  -- lfn=log.46676269._095659.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:28:16] 2025-10-13 09:27:26,978 | INFO     | stage-out finished correctly
[2025-10-13 05:28:16] 2025-10-13 09:27:27,634 | INFO     | monitor loop #392: job 0:6841971310 is in state 'finished'
[2025-10-13 05:28:16] 2025-10-13 09:27:27,635 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:28:16] 2025-10-13 09:27:28,777 | INFO     | time since job start (5247s) is within the limit (172800.0s)
[2025-10-13 05:28:16] 2025-10-13 09:27:29,667 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:28:16] 2025-10-13 09:27:30,138 | INFO     | monitor loop #393: job 0:6841971310 is in state 'finished'
[2025-10-13 05:28:16] 2025-10-13 09:27:30,139 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:28:16] 2025-10-13 09:27:30,783 | INFO     | time since job start (5249s) is within the limit (172800.0s)
[2025-10-13 05:28:16] 2025-10-13 09:27:30,783 | INFO     | 5251s have passed since pilot start - server update state is 'RUNNING'
[2025-10-13 05:28:16] 2025-10-13 09:27:31,028 | INFO     | job 6841971310 has state=finished
[2025-10-13 05:28:16] 2025-10-13 09:27:31,028 | INFO     | preparing for final server update for job 6841971310 in state='finished'
[2025-10-13 05:28:16] 2025-10-13 09:27:31,029 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:28:16] 2025-10-13 09:27:31,029 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:28:16] 2025-10-13 09:27:31,029 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:28:16] 2025-10-13 09:27:31,029 | INFO     | job 6841971310 has finished - writing final server update
[2025-10-13 05:28:16] 2025-10-13 09:27:31,029 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:28:16] 2025-10-13 09:27:31,030 | INFO     | executing command: lscpu
[2025-10-13 05:28:16] 2025-10-13 09:27:31,079 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:28:16] 2025-10-13 09:27:32,642 | INFO     | monitor loop #394: job 0:6841971310 is in state 'finished'
[2025-10-13 05:28:16] 2025-10-13 09:27:32,643 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:28:16] 2025-10-13 09:27:32,788 | INFO     | time since job start (5251s) is within the limit (172800.0s)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,021 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:28:16] 2025-10-13 09:27:34,028 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.064625000001
[2025-10-13 05:28:16] 2025-10-13 09:27:34,034 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6841971310/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,035 | INFO     | extracted standard info from prmon json
[2025-10-13 05:28:16] 2025-10-13 09:27:34,035 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:28:16] 2025-10-13 09:27:34,035 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:28:16] 2025-10-13 09:27:34,036 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:28:16] 2025-10-13 09:27:34,036 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:28:16] 2025-10-13 09:27:34,038 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:28:16] 2025-10-13 09:27:34,039 | INFO     | sum of square deviations: 152858680.0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,039 | INFO     | sum of deviations: -1099703059.0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,039 | INFO     | mean x: 1760345110.0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,039 | INFO     | mean y: 2160975.405063291
[2025-10-13 05:28:16] 2025-10-13 09:27:34,040 | INFO     | -- intersect: 12666518029.663883
[2025-10-13 05:28:16] 2025-10-13 09:27:34,040 | INFO     | intersect: 12666518029.663883
[2025-10-13 05:28:16] 2025-10-13 09:27:34,040 | INFO     | chi2: 0.06336135576808255
[2025-10-13 05:28:16] 2025-10-13 09:27:34,040 | INFO     | -- intersect: 12666518029.663883
[2025-10-13 05:28:16] 2025-10-13 09:27:34,040 | INFO     | current memory leak: -7.19 B/s (using 79 data points, chi2=0.06)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | could have reported an average CPU frequency of 2850 MHz (6 samples)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | ..............................
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . Timing measurements:
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . get job = 0 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . initial setup = 2 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . payload setup = 5 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . stage-in = 0 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,041 | INFO     | . payload execution = 5220 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,042 | INFO     | . stage-out = 0 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,042 | INFO     | . log creation = 0 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,042 | INFO     | ..............................
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | 
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | job summary report
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | --------------------------------------------------
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | PanDA job id: 6841971310
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | task id: 46676269
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | errors: (none)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,608 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | pilot state: finished 
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | transexitcode: 0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | exeerrorcode: 0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | exeerrordiag: 
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | exitcode: 0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | exitmsg: OK
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | cpuconsumptiontime: 38377 s
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | nevents: 400
[2025-10-13 05:28:16] 2025-10-13 09:27:34,609 | INFO     | neventsw: 0
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | pid: 1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | pgrp: 1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | corecount: 8
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | event service: False
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | sizes: {0: 2348807, 4: 2349069, 11: 2349097, 5229: 2375539, 5230: 2384537, 5233: 2384593, 5237: 2384915}
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | --------------------------------------------------
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | 
[2025-10-13 05:28:16] 2025-10-13 09:27:34,610 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:28:16] 2025-10-13 09:27:34,627 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,628 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,629 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | job 6841971310 has completed (purged errors)
[2025-10-13 05:28:16] 2025-10-13 09:27:34,630 | INFO     | overall cleanup function is called
[2025-10-13 05:28:16] 2025-10-13 09:27:35,638 | INFO     | --- collectZombieJob: --- 10, [1933752]
[2025-10-13 05:28:16] 2025-10-13 09:27:35,639 | INFO     | zombie collector waiting for pid 1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:35,639 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:28:16] 2025-10-13 09:27:35,639 | INFO     | collected zombie processes
[2025-10-13 05:28:16] 2025-10-13 09:27:35,639 | INFO     | will attempt to kill all subprocesses of pid=1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:35,890 | INFO     | process IDs to be killed: [1933752] (in reverse order)
[2025-10-13 05:28:16] 2025-10-13 09:27:35,957 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:28:16] 2025-10-13 09:27:35,958 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:28:16] 2025-10-13 09:27:35,965 | INFO     | did not find any defunct processes belonging to 1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:35,971 | INFO     | did not find any defunct processes belonging to 1933752
[2025-10-13 05:28:16] 2025-10-13 09:27:35,971 | INFO     | ready for new job
[2025-10-13 05:28:16] 2025-10-13 09:27:35,971 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:28:16] 2025-10-13 09:27:35,973 | INFO     | ***************************************
[2025-10-13 05:28:16] 2025-10-13 09:27:35,974 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:28:16] 2025-10-13 09:27:35,974 | INFO     | ***************************************
[2025-10-13 05:28:16] 2025-10-13 09:27:35,974 | INFO     | 
[2025-10-13 05:28:16] 2025-10-13 09:27:35,987 | INFO     | architecture information:
[2025-10-13 05:28:16] 2025-10-13 09:27:35,988 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:28:16] 2025-10-13 09:27:36,000 | INFO     | cat /etc/os-release:
[2025-10-13 05:28:16] NAME="CentOS Linux"
[2025-10-13 05:28:16] VERSION="7 (Core)"
[2025-10-13 05:28:16] ID="centos"
[2025-10-13 05:28:16] ID_LIKE="rhel fedora"
[2025-10-13 05:28:16] VERSION_ID="7"
[2025-10-13 05:28:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:28:16] ANSI_COLOR="0;31"
[2025-10-13 05:28:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:28:16] HOME_URL="https://www.centos.org/"
[2025-10-13 05:28:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:28:16] 
[2025-10-13 05:28:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:28:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:28:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:28:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:28:16] 
[2025-10-13 05:28:16] 2025-10-13 09:27:36,000 | INFO     | ***************************************
[2025-10-13 05:28:16] 2025-10-13 09:27:36,503 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:28:16] 2025-10-13 09:27:36,517 | INFO     | sufficient remaining disk space (74352427008 B)
[2025-10-13 05:28:16] 2025-10-13 09:27:36,517 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:28:16] 2025-10-13 09:27:36,518 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:28:16] 2025-10-13 09:27:36,518 | INFO     | update_server=False
[2025-10-13 05:28:16] 2025-10-13 09:27:36,518 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:28:16] 2025-10-13 09:27:36,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:28:16] 2025-10-13 09:27:36,519 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:16] 2025-10-13 09:27:36,519 | INFO     | aborting loop
[2025-10-13 05:28:16] 2025-10-13 09:27:36,643 | INFO     | all data control threads have been joined
[2025-10-13 05:28:16] 2025-10-13 09:27:37,245 | INFO     | all payload control threads have been joined
[2025-10-13 05:28:16] 2025-10-13 09:27:37,523 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:37,524 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:37,555 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:37,600 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:28:16] 2025-10-13 09:27:37,640 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:37,648 | INFO     | [data] control thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,121 | INFO     | all job control threads have been joined
[2025-10-13 05:28:16] 2025-10-13 09:27:38,179 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,251 | INFO     | [payload] control thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,354 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,417 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,514 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,561 | INFO     | [job] validate thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:38,789 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:39,127 | INFO     | [job] control thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:39,158 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:28:16] 2025-10-13 09:27:39,606 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:40,163 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:27:40,524 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:28:16] 2025-10-13 09:28:06,171 | INFO     | PID=1925426 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:28:16] 2025-10-13 09:28:06,171 | INFO     | .. there are 4 such processes running
[2025-10-13 05:28:16] 2025-10-13 09:28:06,171 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:28:16] 2025-10-13 09:28:06,172 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:28:16] 2025-10-13 09:28:06,172 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:28:16] 2025-10-13 09:28:09,543 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:28:16] 2025-10-13 09:28:11,476 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140235886237504)>', '<ExcThread(monitor, started 140235170113280)>']
[2025-10-13 05:28:16] 2025-10-13 09:28:12,192 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:28:16] 2025-10-13 09:28:12,192 | INFO     | [monitor] control thread has ended
[2025-10-13 05:28:16] 2025-10-13 09:28:16,477 | INFO     | all workflow threads have been joined
[2025-10-13 05:28:16] 2025-10-13 09:28:16,477 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:28:16] 2025-10-13 09:28:16,477 | INFO     | traces error code: 0
[2025-10-13 05:28:16] 2025-10-13 09:28:16,478 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:28:16] 2025-10-13 09:28:16,606 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:28:16] 2025-10-13 09:28:16,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:28:16] 2025-10-13 09:28:16,610 [wrapper] pilotpid: 1925426
[2025-10-13 05:28:16] 2025-10-13 09:28:16,613 [wrapper] Pilot exit status: 0
[2025-10-13 05:28:16] 2025-10-13 09:28:16,621 [wrapper] pandaids: 6841971310
[2025-10-13 05:28:16] 2025-10-13 09:28:16,665 [wrapper] cleanup supervisor_pilot 2106659 1925427
[2025-10-13 05:28:16] 2025-10-13 09:28:16,667 [wrapper] Test setup, not cleaning
[2025-10-13 05:28:16] 2025-10-13 09:28:16,670 [wrapper] apfmon messages muted
[2025-10-13 05:28:16] 2025-10-13 09:28:16,672 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:28:16] 2025-10-13 09:28:16,674 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:28:16]  *** Error codes and diagnostics ***
[2025-10-13 05:28:16]     "exeErrorCode": 0,
[2025-10-13 05:28:16]     "exeErrorDiag": "",
[2025-10-13 05:28:16]     "pilotErrorCode": 0,
[2025-10-13 05:28:16]     "pilotErrorDiag": "",
[2025-10-13 05:28:16]  *** Listing of results directory ***
[2025-10-13 05:28:16] total 415408
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 23:15 queuedata.json
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 23:15 pilot3.tar.gz
[2025-10-13 05:28:16] -rwx------. 1 boincer umatlas     36292 Oct 12 23:16 runpilot2-wrapper.sh
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:28:16] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:59 run_atlas
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:59 job.xml
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas 220295425 Oct 13 03:59 EVNT.46676267._002038.pool.root.1
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:59 start_atlas.sh
[2025-10-13 05:28:16] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:59 shared
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 03:59 input.tar.gz
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:59 boinc_lockfile
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:59 pandaJob.out
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas    972849 Oct 13 03:59 agis_schedconf.cvmfs.json
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:00 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:28:16] drwx------. 5 boincer umatlas      4096 Oct 13 04:00 pilot3
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 05:22 init_data.xml
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:26 boinc_task_state.xml
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas 198937553 Oct 13 05:26 HITS.46676269._095659.pool.root.1
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas      1045 Oct 13 05:27 memory_monitor_summary.json
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas    349692 Oct 13 05:27 log.46676269._095659.job.log.tgz.1
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas        95 Oct 13 05:27 pilot_heartbeat.json
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas      7809 Oct 13 05:27 heartbeat.json
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:28 boinc_mmap_file
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:28 wrapper_checkpoint.txt
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas      4823 Oct 13 05:28 pilotlog.txt
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas    771158 Oct 13 05:28 log.46676269._095659.job.log.1
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas       357 Oct 13 05:28 output.list
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:28 runtime_log
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas   1136640 Oct 13 05:28 result.tar.gz
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 05:28 runtime_log.err
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas       648 Oct 13 05:28 cOhLDm5DOS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIcVMDmOJrnIm.diag
[2025-10-13 05:28:16] -rw-r--r--. 1 boincer umatlas     21855 Oct 13 05:28 stderr.txt
[2025-10-13 05:28:16] HITS file was successfully produced:
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas 198937553 Oct 13 05:26 shared/HITS.pool.root.1
[2025-10-13 05:28:16]  *** Contents of shared directory: ***
[2025-10-13 05:28:16] total 411108
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas 220295425 Oct 13 03:59 ATLAS.root_0
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:59 start_atlas.sh
[2025-10-13 05:28:16] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 03:59 input.tar.gz
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas 198937553 Oct 13 05:26 HITS.pool.root.1
[2025-10-13 05:28:16] -rw-------. 1 boincer umatlas   1136640 Oct 13 05:28 result.tar.gz
05:28:17 (1921725): run_atlas exited; CPU time 38502.826222
05:28:17 (1921725): called boinc_finish(0)

</stderr_txt>
]]>

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