Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:54:44 (3342835): wrapper (7.7.26015): starting
19:54:44 (3342835): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:54:44] Arguments: --nthreads 3
[2025-10-13 19:54:44] Threads: 3
[2025-10-13 19:54:44] Checking for CVMFS
[2025-10-13 19:54:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:54:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:54:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:54:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:54:44] 2.9.2.0 1494257 6136 81312 151668 3 57 24293208 36864001 0 130560 0 4864067 99.991 208160 845 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:54:44] CVMFS is ok
[2025-10-13 19:54:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:54:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:54:44] Further information can be found at the LHC@home message board.
[2025-10-13 19:54:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:54:44] Checking for apptainer binary...
[2025-10-13 19:54:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:54:44] Running /usr/bin/apptainer --version
[2025-10-13 19:54:44] apptainer version 1.4.1-1.1
[2025-10-13 19:54:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:54:44] thA331a
[2025-10-13 19:54:44] apptainer works
[2025-10-13 19:54:44] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:54:44] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:54:44] Starting ATLAS job with PandaID=6840390898
[2025-10-13 19:54:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:18:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:18:02] 2025-10-13 19:17:02,060 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:18:02] 2025-10-13 19:17:02,081 | INFO     | all data control threads have been joined
[2025-10-13 21:18:02] 2025-10-13 19:17:02,486 | INFO     | all job control threads have been joined
[2025-10-13 21:18:02] 2025-10-13 19:17:02,491 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:18:02] 2025-10-13 19:17:02,625 | INFO     | all payload control threads have been joined
[2025-10-13 21:18:02] 2025-10-13 19:17:02,729 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:18:02] 2025-10-13 19:17:02,729 | INFO     | aborting loop
[2025-10-13 21:18:02] 2025-10-13 19:17:03,066 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,066 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,085 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,087 | INFO     | [data] control thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,182 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,492 | INFO     | [job] control thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,612 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,631 | INFO     | [payload] control thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,735 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:03,960 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,014 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,152 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,304 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,464 | INFO     | [job] validate thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,497 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:04,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:18:02] 2025-10-13 19:17:08,623 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:18:02] 2025-10-13 19:17:32,094 | INFO     | PID=3346561 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:18:02] 2025-10-13 19:17:32,094 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:18:02] 2025-10-13 19:17:32,094 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:18:02] 2025-10-13 19:17:32,094 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:18:02] 2025-10-13 19:17:55,472 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:18:02] 2025-10-13 19:17:57,182 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140521093007168)>', '<ExcThread(monitor, started 140520248567552)>']
[2025-10-13 21:18:02] 2025-10-13 19:17:57,224 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:18:02] 2025-10-13 19:17:57,225 | INFO     | [monitor] control thread has ended
[2025-10-13 21:18:02] 2025-10-13 19:18:02,199 | INFO     | all workflow threads have been joined
[2025-10-13 21:18:02] 2025-10-13 19:18:02,199 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:18:02] 2025-10-13 19:18:02,200 | INFO     | traces error code: 0
[2025-10-13 21:18:02] 2025-10-13 19:18:02,200 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:18:02] 2025-10-13 19:18:02,250 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:18:02] 2025-10-13 19:18:02,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:18:02] 2025-10-13 19:18:02,255 [wrapper] pilotpid: 3346561
[2025-10-13 21:18:02] 2025-10-13 19:18:02,257 [wrapper] Pilot exit status: 0
[2025-10-13 21:18:02] 2025-10-13 19:18:02,264 [wrapper] pandaids: 6840390898
[2025-10-13 21:18:02] 2025-10-13 19:18:02,280 [wrapper] cleanup supervisor_pilot 3364884 3346562
[2025-10-13 21:18:02] 2025-10-13 19:18:02,282 [wrapper] Test setup, not cleaning
[2025-10-13 21:18:02] 2025-10-13 19:18:02,285 [wrapper] apfmon messages muted
[2025-10-13 21:18:02] 2025-10-13 19:18:02,287 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:18:02] 2025-10-13 19:18:02,289 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:18:02]  *** Error codes and diagnostics ***
[2025-10-13 21:18:02]     "exeErrorCode": 0,
[2025-10-13 21:18:02]     "exeErrorDiag": "",
[2025-10-13 21:18:02]     "pilotErrorCode": 0,
[2025-10-13 21:18:02]     "pilotErrorDiag": "",
[2025-10-13 21:18:02]  *** Listing of results directory ***
[2025-10-13 21:18:02] total 413224
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc    557409 Oct 12 18:01 pilot3.tar.gz
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      5112 Oct 12 18:34 queuedata.json
[2025-10-13 21:18:02] -rwx------ 1 boinc boinc     36292 Oct 12 18:36 runpilot2-wrapper.sh
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:18:02] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:54 run_atlas
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:54 job.xml
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc 220378003 Oct 13 19:54 EVNT.46676267._004749.pool.root.1
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc    569680 Oct 13 19:54 input.tar.gz
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:54 start_atlas.sh
[2025-10-13 21:18:02] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:54 shared
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:54 boinc_setup_complete
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      6440 Oct 13 19:54 init_data.xml
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:54 boinc_lockfile
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:54 pandaJob.out
[2025-10-13 21:18:02] -rw------- 1 boinc boinc    972791 Oct 13 19:54 agis_schedconf.cvmfs.json
[2025-10-13 21:18:02] -rw------- 1 boinc boinc   1560580 Oct 13 19:54 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:18:02] drwx------ 5 boinc boinc      4096 Oct 13 19:54 pilot3
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:16 boinc_task_state.xml
[2025-10-13 21:18:02] -rw------- 1 boinc boinc 196927454 Oct 13 21:16 HITS.46676269._083670.pool.root.1
[2025-10-13 21:18:02] -rw------- 1 boinc boinc      1014 Oct 13 21:16 memory_monitor_summary.json
[2025-10-13 21:18:02] -rw------- 1 boinc boinc    250400 Oct 13 21:16 log.46676269._083670.job.log.tgz.1
[2025-10-13 21:18:02] -rw------- 1 boinc boinc      7756 Oct 13 21:17 heartbeat.json
[2025-10-13 21:18:02] -rw------- 1 boinc boinc        95 Oct 13 21:17 pilot_heartbeat.json
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:17 boinc_mmap_file
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:18 wrapper_checkpoint.txt
[2025-10-13 21:18:02] -rw------- 1 boinc boinc      4752 Oct 13 21:18 pilotlog.txt
[2025-10-13 21:18:02] -rw------- 1 boinc boinc    724511 Oct 13 21:18 log.46676269._083670.job.log.1
[2025-10-13 21:18:02] -rw------- 1 boinc boinc       357 Oct 13 21:18 output.list
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:18 runtime_log
[2025-10-13 21:18:02] -rw------- 1 boinc boinc    993280 Oct 13 21:18 result.tar.gz
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      8782 Oct 13 21:18 runtime_log.err
[2025-10-13 21:18:02] -rw------- 1 boinc boinc       659 Oct 13 21:18 5WNLDmTEES8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmfgkNDmm6JJLo.diag
[2025-10-13 21:18:02] -rw-r--r-- 1 boinc boinc      7195 Oct 13 21:18 stderr.txt
[2025-10-13 21:18:02] HITS file was successfully produced:
[2025-10-13 21:18:02] -rw------- 1 boinc boinc 196927454 Oct 13 21:16 shared/HITS.pool.root.1
[2025-10-13 21:18:02]  *** Contents of shared directory: ***
[2025-10-13 21:18:02] total 409084
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc 220378003 Oct 13 19:54 ATLAS.root_0
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc    569680 Oct 13 19:54 input.tar.gz
[2025-10-13 21:18:02] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:54 start_atlas.sh
[2025-10-13 21:18:02] -rw------- 1 boinc boinc 196927454 Oct 13 21:16 HITS.pool.root.1
[2025-10-13 21:18:02] -rw------- 1 boinc boinc    993280 Oct 13 21:18 result.tar.gz
21:18:04 (3342835): run_atlas exited; CPU time 14083.911464
21:18:04 (3342835): called boinc_finish(0)

</stderr_txt>
]]>

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