Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:12:51 (3673428): wrapper (7.7.26015): starting
05:12:51 (3673428): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:12:51] Arguments: --nthreads 8
[2025-10-13 05:12:51] Threads: 8
[2025-10-13 05:12:51] Checking for CVMFS
[2025-10-13 05:12:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:12:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:12:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:12:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:12:51] 2.13.2.0 654572 130505 503676 151654 3 549 26078749 32935937 40192 16776704 0 458985177 99.685 373843370 16897 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 05:12:51] CVMFS is ok
[2025-10-13 05:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:12:52] Further information can be found at the LHC@home message board.
[2025-10-13 05:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:12:52] Checking for apptainer binary...
[2025-10-13 05:12:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:12:52] Running /usr/bin/apptainer --version
[2025-10-13 05:12:52] apptainer version 1.4.3-1.el9
[2025-10-13 05:12:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:12:52] c7-3-28.aglt2.org
[2025-10-13 05:12:52] apptainer works
[2025-10-13 05:12:52] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:12:52] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:12:52] Starting ATLAS job with PandaID=6841687536
[2025-10-13 05:12:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 07:41:42]  *** The last 200 lines of the pilot log: ***
[2025-10-13 07:41:42] 2025-10-13 11:41:00,883 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6841687536/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,883 | INFO     | extracted standard info from prmon json
[2025-10-13 07:41:42] 2025-10-13 11:41:00,884 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 07:41:42] 2025-10-13 11:41:00,884 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 07:41:42] 2025-10-13 11:41:00,884 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 07:41:42] 2025-10-13 11:41:00,884 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 07:41:42] 2025-10-13 11:41:00,887 | INFO     | fitting pss+swap vs Time
[2025-10-13 07:41:42] 2025-10-13 11:41:00,887 | INFO     | sum of square deviations: 945286994.6620657
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | sum of deviations: 19563964216.096554
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | mean x: 1760351245.048276
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | mean y: 2209447.9862068966
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | -- intersect: -36430587110.47843
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | intersect: -36430587110.47843
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | chi2: 2.719187378177129
[2025-10-13 07:41:42] 2025-10-13 11:41:00,888 | INFO     | sum of square deviations: 850822820.7428564
[2025-10-13 07:41:42] 2025-10-13 11:41:00,889 | INFO     | sum of deviations: 26594281979.228558
[2025-10-13 07:41:42] 2025-10-13 11:41:00,889 | INFO     | mean x: 1760351092.5428572
[2025-10-13 07:41:42] 2025-10-13 11:41:00,889 | INFO     | mean y: 2220444.1285714284
[2025-10-13 07:41:42] 2025-10-13 11:41:00,889 | INFO     | -- intersect: -55021307599.763374
[2025-10-13 07:41:42] 2025-10-13 11:41:00,889 | INFO     | intersect: -55021307599.763374
[2025-10-13 07:41:42] 2025-10-13 11:41:00,890 | INFO     | chi2: 2.0703439549555154
[2025-10-13 07:41:42] 2025-10-13 11:41:00,890 | INFO     | current chi2=2.0703439549555154 (change=23.861666482748277 %)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,890 | INFO     | right removable region: 139
[2025-10-13 07:41:42] 2025-10-13 11:41:00,890 | INFO     | sum of square deviations: 850827274.6499988
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | sum of deviations: -7971097415.65
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | mean x: 1760351397.55
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | mean y: 2253563.8785714284
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | -- intersect: 16494358240.963501
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | intersect: 16494358240.963501
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | chi2: 0.748361263491716
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | current chi2=0.748361263491716 (change=72.47849598384802 %)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,891 | INFO     | sum of square deviations: 762879304.6370363
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | sum of deviations: -10824765403.777773
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | mean x: 1760351550.0518517
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | mean y: 2258417.111111111
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | -- intersect: 24980511781.257698
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | intersect: 24980511781.257698
[2025-10-13 07:41:42] 2025-10-13 11:41:00,892 | INFO     | chi2: 0.7045366221340197
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | current chi2=0.7045366221340197 (change=5.856080945881478 %)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | left removable region: 20
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | sum of square deviations: 522493431.6974782
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | sum of deviations: -1731120036.2773108
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | mean x: 1760351672.0504203
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | mean y: 2270115.5462184874
[2025-10-13 07:41:42] 2025-10-13 11:41:00,893 | INFO     | -- intersect: 5834649750.406721
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | intersect: 5834649750.406721
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | chi2: 0.02513422695525162
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | -- intersect: 5834649750.406721
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | current memory leak: -3.31 B/s (using 119 data points, chi2=0.03)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | could have reported an average CPU frequency of 3153 MHz (8 samples)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,894 | INFO     | ..............................
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . Timing measurements:
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . get job = 0 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . initial setup = 3 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . payload setup = 16 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . stage-in = 0 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . payload execution = 8800 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . stage-out = 1 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | . log creation = 0 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,895 | INFO     | ..............................
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | 
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | job summary report
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | --------------------------------------------------
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | PanDA job id: 6841687536
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | task id: 46676269
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | errors: (none)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | pilot state: finished 
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | transexitcode: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | exeerrorcode: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | exeerrordiag: 
[2025-10-13 07:41:42] 2025-10-13 11:41:00,969 | INFO     | exitcode: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | exitmsg: OK
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | cpuconsumptiontime: 30425 s
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | nevents: 400
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | neventsw: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | pid: 3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | pgrp: 3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | corecount: 8
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | event service: False
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | sizes: {0: 2348807, 1: 2348807, 11: 2349097, 12: 2349125, 8821: 2377030, 8822: 2386028, 8823: 2386212, 8835: 2386406}
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | --------------------------------------------------
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | 
[2025-10-13 07:41:42] 2025-10-13 11:41:00,970 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 07:41:42] 2025-10-13 11:41:00,991 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,991 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,991 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,991 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,994 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,994 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,995 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,996 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,996 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 07:41:42] 2025-10-13 11:41:00,996 | INFO     | job 6841687536 has completed (purged errors)
[2025-10-13 07:41:42] 2025-10-13 11:41:00,996 | INFO     | overall cleanup function is called
[2025-10-13 07:41:42] 2025-10-13 11:41:02,004 | INFO     | --- collectZombieJob: --- 10, [3692908]
[2025-10-13 07:41:42] 2025-10-13 11:41:02,013 | INFO     | zombie collector waiting for pid 3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:02,013 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 07:41:42] 2025-10-13 11:41:02,013 | INFO     | collected zombie processes
[2025-10-13 07:41:42] 2025-10-13 11:41:02,013 | INFO     | will attempt to kill all subprocesses of pid=3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:02,672 | INFO     | PID=3678097 has CPU usage=12.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 07:41:42] 2025-10-13 11:41:02,672 | INFO     | .. there are 46 such processes running
[2025-10-13 07:41:42] 2025-10-13 11:41:02,856 | INFO     | process IDs to be killed: [3692908] (in reverse order)
[2025-10-13 07:41:42] 2025-10-13 11:41:03,075 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 07:41:42] 2025-10-13 11:41:03,076 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 07:41:42] 2025-10-13 11:41:03,098 | INFO     | did not find any defunct processes belonging to 3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:03,122 | INFO     | did not find any defunct processes belonging to 3692908
[2025-10-13 07:41:42] 2025-10-13 11:41:03,123 | INFO     | ready for new job
[2025-10-13 07:41:42] 2025-10-13 11:41:03,123 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 07:41:42] 2025-10-13 11:41:03,124 | INFO     | ***************************************
[2025-10-13 07:41:42] 2025-10-13 11:41:03,124 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 07:41:42] 2025-10-13 11:41:03,124 | INFO     | ***************************************
[2025-10-13 07:41:42] 2025-10-13 11:41:03,124 | INFO     | 
[2025-10-13 07:41:42] 2025-10-13 11:41:03,142 | INFO     | architecture information:
[2025-10-13 07:41:42] 2025-10-13 11:41:03,142 | INFO     | executing command: cat /etc/os-release
[2025-10-13 07:41:42] 2025-10-13 11:41:03,159 | INFO     | cat /etc/os-release:
[2025-10-13 07:41:42] NAME="CentOS Linux"
[2025-10-13 07:41:42] VERSION="7 (Core)"
[2025-10-13 07:41:42] ID="centos"
[2025-10-13 07:41:42] ID_LIKE="rhel fedora"
[2025-10-13 07:41:42] VERSION_ID="7"
[2025-10-13 07:41:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 07:41:42] ANSI_COLOR="0;31"
[2025-10-13 07:41:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 07:41:42] HOME_URL="https://www.centos.org/"
[2025-10-13 07:41:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 07:41:42] 
[2025-10-13 07:41:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 07:41:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 07:41:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 07:41:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 07:41:42] 
[2025-10-13 07:41:42] 2025-10-13 11:41:03,159 | INFO     | ***************************************
[2025-10-13 07:41:42] 2025-10-13 11:41:03,662 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 07:41:42] 2025-10-13 11:41:03,718 | INFO     | sufficient remaining disk space (74593599488 B)
[2025-10-13 07:41:42] 2025-10-13 11:41:03,718 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 07:41:42] 2025-10-13 11:41:03,718 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 07:41:42] 2025-10-13 11:41:03,718 | INFO     | update_server=False
[2025-10-13 07:41:42] 2025-10-13 11:41:03,718 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 07:41:42] 2025-10-13 11:41:04,107 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 07:41:42] 2025-10-13 11:41:04,202 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 07:41:42] 2025-10-13 11:41:04,216 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 07:41:42] 2025-10-13 11:41:04,216 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 07:41:42] 2025-10-13 11:41:04,216 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:41:42] 2025-10-13 11:41:04,216 | INFO     | will abort loop
[2025-10-13 07:41:42] 2025-10-13 11:41:04,560 | INFO     | all data control threads have been joined
[2025-10-13 07:41:42] 2025-10-13 11:41:04,704 | INFO     | all payload control threads have been joined
[2025-10-13 07:41:42] 2025-10-13 11:41:04,725 | INFO     | [job] retrieve thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:04,931 | INFO     | [data] copytool_in thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,003 | INFO     | [payload] failed_post thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,217 | INFO     | all job control threads have been joined
[2025-10-13 07:41:42] 2025-10-13 11:41:05,223 | INFO     | [job] job monitor thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,345 | INFO     | [payload] validate_post thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,568 | INFO     | [data] control thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,606 | INFO     | [job] validate thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,643 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,660 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,709 | INFO     | [payload] control thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,716 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:05,990 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 07:41:42] 2025-10-13 11:41:06,114 | INFO     | [data] copytool_out thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:06,222 | INFO     | [job] control thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:07,004 | INFO     | [job] queue monitor thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:08,224 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:13,810 | INFO     | job.realtimelogging is not enabled
[2025-10-13 07:41:42] 2025-10-13 11:41:14,819 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 07:41:42] 2025-10-13 11:41:35,631 | INFO     | PID=3678097 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 07:41:42] 2025-10-13 11:41:35,631 | INFO     | .. there are 46 such processes running
[2025-10-13 07:41:42] 2025-10-13 11:41:35,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 07:41:42] 2025-10-13 11:41:35,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 07:41:42] 2025-10-13 11:41:35,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 07:41:42] 2025-10-13 11:41:35,650 | INFO     | [monitor] cgroup control has ended
[2025-10-13 07:41:42] 2025-10-13 11:41:36,259 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139693091800896)>', '<ExcThread(monitor, started 139692435552000)>']
[2025-10-13 07:41:42] 2025-10-13 11:41:36,638 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 07:41:42] 2025-10-13 11:41:36,638 | INFO     | [monitor] control thread has ended
[2025-10-13 07:41:42] 2025-10-13 11:41:41,311 | INFO     | all workflow threads have been joined
[2025-10-13 07:41:42] 2025-10-13 11:41:41,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 07:41:42] 2025-10-13 11:41:41,315 | INFO     | traces error code: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:41,315 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 07:41:42] 2025-10-13 11:41:41,676 [wrapper] ==== pilot stdout END ====
[2025-10-13 07:41:42] 2025-10-13 11:41:41,686 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 07:41:42] 2025-10-13 11:41:41,694 [wrapper] pilotpid: 3678097
[2025-10-13 07:41:42] 2025-10-13 11:41:41,697 [wrapper] Pilot exit status: 0
[2025-10-13 07:41:42] 2025-10-13 11:41:41,735 [wrapper] pandaids: 6841687536
[2025-10-13 07:41:42] 2025-10-13 11:41:41,896 [wrapper] cleanup supervisor_pilot  115200 3678098
[2025-10-13 07:41:42] 2025-10-13 11:41:41,901 [wrapper] Test setup, not cleaning
[2025-10-13 07:41:42] 2025-10-13 11:41:41,907 [wrapper] apfmon messages muted
[2025-10-13 07:41:42] 2025-10-13 11:41:41,910 [wrapper] ==== wrapper stdout END ====
[2025-10-13 07:41:42] 2025-10-13 11:41:41,913 [wrapper] ==== wrapper stderr END ====
[2025-10-13 07:41:42]  *** Error codes and diagnostics ***
[2025-10-13 07:41:42]     "exeErrorCode": 0,
[2025-10-13 07:41:42]     "exeErrorDiag": "",
[2025-10-13 07:41:42]     "pilotErrorCode": 0,
[2025-10-13 07:41:42]     "pilotErrorDiag": "",
[2025-10-13 07:41:42]  *** Listing of results directory ***
[2025-10-13 07:41:42] total 407984
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:58 queuedata.json
[2025-10-13 07:41:42] -rwx------. 1 boincer umatlas     36292 Oct 12 23:00 runpilot2-wrapper.sh
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 07:41:42] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:12 run_atlas
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:12 job.xml
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas 224037175 Oct 13 05:12 EVNT.46676267._002598.pool.root.1
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:12 start_atlas.sh
[2025-10-13 07:41:42] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:12 shared
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 05:12 input.tar.gz
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:12 boinc_lockfile
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:12 pandaJob.out
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas    972857 Oct 13 05:13 agis_schedconf.cvmfs.json
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas   1560580 Oct 13 05:13 agis_ddmendpoints.agis.ALL.json
[2025-10-13 07:41:42] drwx------. 5 boincer umatlas      4096 Oct 13 05:13 pilot3
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas      6935 Oct 13 07:38 init_data.xml
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas 186867614 Oct 13 07:40 HITS.46676269._095404.pool.root.1
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas       530 Oct 13 07:40 boinc_task_state.xml
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas      1043 Oct 13 07:40 memory_monitor_summary.json
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas    371347 Oct 13 07:40 log.46676269._095404.job.log.tgz.1
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas        95 Oct 13 07:40 pilot_heartbeat.json
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas      7793 Oct 13 07:41 heartbeat.json
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas      5082 Oct 13 07:41 pilotlog.txt
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas        27 Oct 13 07:41 wrapper_checkpoint.txt
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 07:41 boinc_mmap_file
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas   1114952 Oct 13 07:41 log.46676269._095404.job.log.1
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas       357 Oct 13 07:41 output.list
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas       620 Oct 13 07:41 runtime_log
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas   1505280 Oct 13 07:41 result.tar.gz
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 07:41 runtime_log.err
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas       656 Oct 13 07:41 25HMDmIyNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmIZmNDmBATM7m.diag
[2025-10-13 07:41:42] -rw-r--r--. 1 boincer umatlas     21232 Oct 13 07:41 stderr.txt
[2025-10-13 07:41:42] HITS file was successfully produced:
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas 186867614 Oct 13 07:40 shared/HITS.pool.root.1
[2025-10-13 07:41:42]  *** Contents of shared directory: ***
[2025-10-13 07:41:42] total 403328
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas 224037175 Oct 13 05:12 ATLAS.root_0
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:12 start_atlas.sh
[2025-10-13 07:41:42] -rw-r--r--. 2 boincer umatlas    569688 Oct 13 05:12 input.tar.gz
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas 186867614 Oct 13 07:40 HITS.pool.root.1
[2025-10-13 07:41:42] -rw-------. 1 boincer umatlas   1505280 Oct 13 07:41 result.tar.gz
07:41:43 (3673428): run_atlas exited; CPU time 30791.162880
07:41:43 (3673428): called boinc_finish(0)

</stderr_txt>
]]>

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