Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:16:41 (3112050): wrapper (7.7.26015): starting
04:16:41 (3112050): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:16:41] Arguments: --nthreads 8
[2025-10-13 04:16:41] Threads: 8
[2025-10-13 04:16:41] Checking for CVMFS
[2025-10-13 04:16:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:16:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:16:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:16:42] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:16:42] 2.13.2.0 5242 6842 130484 151654 2 65 39977363 40960000 20525 16776704 0 24379596 99.745 14610658 32463 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:16:42] CVMFS is ok
[2025-10-13 04:16:42] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:16:42] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:16:42] Further information can be found at the LHC@home message board.
[2025-10-13 04:16:42] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:16:42] Checking for apptainer binary...
[2025-10-13 04:16:42] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:16:42] Running /usr/bin/apptainer --version
[2025-10-13 04:16:42] apptainer version 1.4.3-1.el9
[2025-10-13 04:16:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:16:42] c-212-1.aglt2.org
[2025-10-13 04:16:42] apptainer works
[2025-10-13 04:16:42] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:16:42] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:16:42] Starting ATLAS job with PandaID=6841068757
[2025-10-13 04:16:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:55:12]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:55:12]  scope=mc23_13p6TeV
[2025-10-13 05:55:12]  status=None
[2025-10-13 05:55:12]  status_code=0
[2025-10-13 05:55:12]  storage_token=
[2025-10-13 05:55:12]  surl=/tmp/boinchome/slots/4/PanDA_Pilot-6841068757/log.46676269._092993.job.log.tgz.1
[2025-10-13 05:55:12]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/72/log.46676269._092993.job.log.tgz.1
[2025-10-13 05:55:12]  workdir=None
[2025-10-13 05:55:12] ]
[2025-10-13 05:55:12] 2025-10-13 09:54:15,841 | INFO     | transferring file log.46676269._092993.job.log.tgz.1 from /tmp/boinchome/slots/4/PanDA_Pilot-6841068757/log.46676269._092993.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 05:55:12] 2025-10-13 09:54:15,842 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/4/PanDA_Pilot-6841068757/log.46676269._092993.job.log.tgz.1 /tmp/boinchome/slots/4/log.46676269._092993.job
[2025-10-13 05:55:12] 2025-10-13 09:54:15,870 | INFO     | adding to output.list: log.46676269._092993.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/22/72/log.46676269._092993.job.log.tg
[2025-10-13 05:55:12] 2025-10-13 09:54:15,871 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:55:12] 2025-10-13 09:54:15,871 | INFO     | summary of transferred files:
[2025-10-13 05:55:12] 2025-10-13 09:54:15,871 | INFO     |  -- lfn=log.46676269._092993.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:55:12] 2025-10-13 09:54:15,871 | INFO     | stage-out finished correctly
[2025-10-13 05:55:12] 2025-10-13 09:54:16,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:55:12] 2025-10-13 09:54:16,475 | INFO     | number of running child processes to parent process 3124671: 1
[2025-10-13 05:55:12] 2025-10-13 09:54:16,476 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:55:12] 2025-10-13 09:54:16,476 | INFO     | time since job start (5841s) is within the limit (172800.0s)
[2025-10-13 05:55:12] 2025-10-13 09:54:16,767 | INFO     | job 6841068757 has state=finished
[2025-10-13 05:55:12] 2025-10-13 09:54:16,768 | INFO     | preparing for final server update for job 6841068757 in state='finished'
[2025-10-13 05:55:12] 2025-10-13 09:54:16,768 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:55:12] 2025-10-13 09:54:16,768 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:55:12] 2025-10-13 09:54:16,768 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:55:12] 2025-10-13 09:54:16,769 | INFO     | job 6841068757 has finished - writing final server update
[2025-10-13 05:55:12] 2025-10-13 09:54:16,769 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:55:12] 2025-10-13 09:54:16,770 | INFO     | executing command: lscpu
[2025-10-13 05:55:12] 2025-10-13 09:54:16,850 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:55:12] 2025-10-13 09:54:18,481 | INFO     | time since job start (5843s) is within the limit (172800.0s)
[2025-10-13 05:55:12] 2025-10-13 09:54:18,982 | INFO     | monitor loop #409: job 0:6841068757 is in state 'finished'
[2025-10-13 05:55:12] 2025-10-13 09:54:18,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:55:12] 2025-10-13 09:54:20,487 | INFO     | time since job start (5845s) is within the limit (172800.0s)
[2025-10-13 05:55:12] 2025-10-13 09:54:21,485 | INFO     | monitor loop #410: job 0:6841068757 is in state 'finished'
[2025-10-13 05:55:12] 2025-10-13 09:54:21,486 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:55:12] 2025-10-13 09:54:22,494 | INFO     | time since job start (5847s) is within the limit (172800.0s)
[2025-10-13 05:55:12] 2025-10-13 09:54:22,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:55:12] 2025-10-13 09:54:22,906 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3013.173770833333
[2025-10-13 05:55:12] 2025-10-13 09:54:22,922 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6841068757/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:55:12] 2025-10-13 09:54:22,923 | INFO     | extracted standard info from prmon json
[2025-10-13 05:55:12] 2025-10-13 09:54:22,923 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:55:12] 2025-10-13 09:54:22,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:55:12] 2025-10-13 09:54:22,923 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:55:12] 2025-10-13 09:54:22,923 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:55:12] 2025-10-13 09:54:22,926 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:55:12] 2025-10-13 09:54:22,926 | INFO     | sum of square deviations: 218573858.98876375
[2025-10-13 05:55:12] 2025-10-13 09:54:22,926 | INFO     | sum of deviations: -22441628755.550568
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | mean x: 1760346434.011236
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | mean y: 2690443.550561798
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | -- intersect: 180742699042.97
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | intersect: 180742699042.97
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | chi2: 0.06089678101195758
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | -- intersect: 180742699042.97
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | current memory leak: -102.67 B/s (using 89 data points, chi2=0.06)
[2025-10-13 05:55:12] 2025-10-13 09:54:22,927 | INFO     | could have reported an average CPU frequency of 3019 MHz (7 samples)
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | ..............................
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . Timing measurements:
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . get job = 0 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . initial setup = 2 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . payload setup = 6 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . stage-in = 0 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . payload execution = 5810 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . stage-out = 1 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | . log creation = 0 s
[2025-10-13 05:55:12] 2025-10-13 09:54:22,928 | INFO     | ..............................
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | 
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | job summary report
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | --------------------------------------------------
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | PanDA job id: 6841068757
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | task id: 46676269
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | errors: (none)
[2025-10-13 05:55:12] 2025-10-13 09:54:23,450 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | pilot state: finished 
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | transexitcode: 0
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | exeerrorcode: 0
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | exeerrordiag: 
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | exitcode: 0
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | exitmsg: OK
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | cpuconsumptiontime: 35414 s
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | nevents: 400
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | neventsw: 0
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | pid: 3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | pgrp: 3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | corecount: 8
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | event service: False
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 5820: 2375998, 5823: 2385052, 5830: 2385190}
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | --------------------------------------------------
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | 
[2025-10-13 05:55:12] 2025-10-13 09:54:23,451 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-13 05:55:12] 2025-10-13 09:54:23,466 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,467 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | job 6841068757 has completed (purged errors)
[2025-10-13 05:55:12] 2025-10-13 09:54:23,468 | INFO     | overall cleanup function is called
[2025-10-13 05:55:12] 2025-10-13 09:54:24,477 | INFO     | --- collectZombieJob: --- 10, [3124671]
[2025-10-13 05:55:12] 2025-10-13 09:54:24,478 | INFO     | zombie collector waiting for pid 3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:24,478 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:55:12] 2025-10-13 09:54:24,479 | INFO     | collected zombie processes
[2025-10-13 05:55:12] 2025-10-13 09:54:24,479 | INFO     | will attempt to kill all subprocesses of pid=3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:24,976 | INFO     | process IDs to be killed: [3124671] (in reverse order)
[2025-10-13 05:55:12] 2025-10-13 09:54:25,102 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:55:12] 2025-10-13 09:54:25,103 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:55:12] 2025-10-13 09:54:25,119 | INFO     | did not find any defunct processes belonging to 3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:25,135 | INFO     | did not find any defunct processes belonging to 3124671
[2025-10-13 05:55:12] 2025-10-13 09:54:25,136 | INFO     | ready for new job
[2025-10-13 05:55:12] 2025-10-13 09:54:25,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:55:12] 2025-10-13 09:54:25,138 | INFO     | ***************************************
[2025-10-13 05:55:12] 2025-10-13 09:54:25,138 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:55:12] 2025-10-13 09:54:25,138 | INFO     | ***************************************
[2025-10-13 05:55:12] 2025-10-13 09:54:25,138 | INFO     | 
[2025-10-13 05:55:12] 2025-10-13 09:54:25,143 | INFO     | architecture information:
[2025-10-13 05:55:12] 2025-10-13 09:54:25,143 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:55:12] 2025-10-13 09:54:25,162 | INFO     | cat /etc/os-release:
[2025-10-13 05:55:12] NAME="CentOS Linux"
[2025-10-13 05:55:12] VERSION="7 (Core)"
[2025-10-13 05:55:12] ID="centos"
[2025-10-13 05:55:12] ID_LIKE="rhel fedora"
[2025-10-13 05:55:12] VERSION_ID="7"
[2025-10-13 05:55:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:55:12] ANSI_COLOR="0;31"
[2025-10-13 05:55:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:55:12] HOME_URL="https://www.centos.org/"
[2025-10-13 05:55:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:55:12] 
[2025-10-13 05:55:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:55:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:55:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:55:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:55:12] 
[2025-10-13 05:55:12] 2025-10-13 09:54:25,163 | INFO     | ***************************************
[2025-10-13 05:55:12] 2025-10-13 09:54:25,667 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-13 05:55:12] 2025-10-13 09:54:25,685 | INFO     | sufficient remaining disk space (125648764928 B)
[2025-10-13 05:55:12] 2025-10-13 09:54:25,686 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:55:12] 2025-10-13 09:54:25,686 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:55:12] 2025-10-13 09:54:25,686 | INFO     | update_server=False
[2025-10-13 05:55:12] 2025-10-13 09:54:25,686 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:55:12] 2025-10-13 09:54:25,686 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:55:12] 2025-10-13 09:54:25,687 | INFO     | aborting loop
[2025-10-13 05:55:12] 2025-10-13 09:54:26,268 | INFO     | all data control threads have been joined
[2025-10-13 05:55:12] 2025-10-13 09:54:26,499 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:55:12] 2025-10-13 09:54:26,692 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:26,695 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:26,787 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:26,859 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:55:12] 2025-10-13 09:54:26,939 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:27,099 | INFO     | all job control threads have been joined
[2025-10-13 05:55:12] 2025-10-13 09:54:27,174 | INFO     | all payload control threads have been joined
[2025-10-13 05:55:12] 2025-10-13 09:54:27,274 | INFO     | [data] control thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:27,333 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:27,387 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:27,616 | INFO     | [job] validate thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:27,961 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:28,022 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:55:12] 2025-10-13 09:54:28,105 | INFO     | [job] control thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:28,180 | INFO     | [payload] control thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:28,269 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:28,506 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:29,028 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:30,866 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:36,189 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:55:12] 2025-10-13 09:54:37,195 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:55:12] 2025-10-13 09:54:56,084 | INFO     | PID=3115755 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:55:12] 2025-10-13 09:54:56,084 | INFO     | .. there are 24 such processes running
[2025-10-13 05:55:12] 2025-10-13 09:54:56,085 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:55:12] 2025-10-13 09:54:56,085 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:55:12] 2025-10-13 09:54:56,085 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:55:12] 2025-10-13 09:55:04,888 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:55:12] 2025-10-13 09:55:06,960 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140532961728320)>', '<ExcThread(monitor, started 140532328163072)>']
[2025-10-13 05:55:12] 2025-10-13 09:55:07,179 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:55:12] 2025-10-13 09:55:07,180 | INFO     | [monitor] control thread has ended
[2025-10-13 05:55:12] 2025-10-13 09:55:11,988 | INFO     | all workflow threads have been joined
[2025-10-13 05:55:12] 2025-10-13 09:55:11,989 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:55:12] 2025-10-13 09:55:11,989 | INFO     | traces error code: 0
[2025-10-13 05:55:12] 2025-10-13 09:55:11,989 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:55:12] 2025-10-13 09:55:12,179 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:55:12] 2025-10-13 09:55:12,182 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:55:12] 2025-10-13 09:55:12,184 [wrapper] pilotpid: 3115755
[2025-10-13 05:55:12] 2025-10-13 09:55:12,187 [wrapper] Pilot exit status: 0
[2025-10-13 05:55:12] 2025-10-13 09:55:12,216 [wrapper] pandaids: 6841068757
[2025-10-13 05:55:12] 2025-10-13 09:55:12,314 [wrapper] cleanup supervisor_pilot 3394521 3115756
[2025-10-13 05:55:12] 2025-10-13 09:55:12,316 [wrapper] Test setup, not cleaning
[2025-10-13 05:55:12] 2025-10-13 09:55:12,319 [wrapper] apfmon messages muted
[2025-10-13 05:55:12] 2025-10-13 09:55:12,322 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:55:12] 2025-10-13 09:55:12,327 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:55:12]  *** Error codes and diagnostics ***
[2025-10-13 05:55:12]     "exeErrorCode": 0,
[2025-10-13 05:55:12]     "exeErrorDiag": "",
[2025-10-13 05:55:12]     "pilotErrorCode": 0,
[2025-10-13 05:55:12]     "pilotErrorDiag": "",
[2025-10-13 05:55:12]  *** Listing of results directory ***
[2025-10-13 05:55:12] total 410732
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:15 queuedata.json
[2025-10-13 05:55:12] -rwx------. 1 boincer umatlas     36292 Oct 12 20:16 runpilot2-wrapper.sh
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:55:12] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:16 run_atlas
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:16 job.xml
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas 221840282 Oct 13 04:16 EVNT.46676267._004686.pool.root.1
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:16 start_atlas.sh
[2025-10-13 05:55:12] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:16 shared
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 04:16 input.tar.gz
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:16 boinc_lockfile
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:16 pandaJob.out
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas    972857 Oct 13 04:16 agis_schedconf.cvmfs.json
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:55:12] drwx------. 5 boincer umatlas      4096 Oct 13 04:16 pilot3
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 05:45 init_data.xml
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas 192482868 Oct 13 05:53 HITS.46676269._092993.pool.root.1
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas       529 Oct 13 05:53 boinc_task_state.xml
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas      1035 Oct 13 05:54 memory_monitor_summary.json
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas    352790 Oct 13 05:54 log.46676269._092993.job.log.tgz.1
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas      7781 Oct 13 05:54 heartbeat.json
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas        95 Oct 13 05:54 pilot_heartbeat.json
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:55 boinc_mmap_file
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas      4897 Oct 13 05:55 pilotlog.txt
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:55 wrapper_checkpoint.txt
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas    830497 Oct 13 05:55 log.46676269._092993.job.log.1
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas       357 Oct 13 05:55 output.list
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:55 runtime_log
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas   1198080 Oct 13 05:55 result.tar.gz
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas       651 Oct 13 05:55 YQDMDmtPLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLBmNDm9D7SQn.diag
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 05:55 runtime_log.err
[2025-10-13 05:55:12] -rw-r--r--. 1 boincer umatlas     21864 Oct 13 05:55 stderr.txt
[2025-10-13 05:55:12] HITS file was successfully produced:
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas 192482868 Oct 13 05:53 shared/HITS.pool.root.1
[2025-10-13 05:55:12]  *** Contents of shared directory: ***
[2025-10-13 05:55:12] total 406372
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas 221840282 Oct 13 04:16 ATLAS.root_0
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:16 start_atlas.sh
[2025-10-13 05:55:12] -rw-r--r--. 2 boincer umatlas    569683 Oct 13 04:16 input.tar.gz
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas 192482868 Oct 13 05:53 HITS.pool.root.1
[2025-10-13 05:55:12] -rw-------. 1 boincer umatlas   1198080 Oct 13 05:55 result.tar.gz
05:55:14 (3112050): run_atlas exited; CPU time 35557.124387
05:55:14 (3112050): called boinc_finish(0)

</stderr_txt>
]]>

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