Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:49:19 (4120615): wrapper (7.7.26015): starting
03:49:19 (4120615): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:49:19] Arguments: --nthreads 8
[2025-10-13 03:49:19] Threads: 8
[2025-10-13 03:49:19] Checking for CVMFS
[2025-10-13 03:49:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:49:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:49:20] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:49:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:49:21] 2.13.2.0 1908877 100277 320224 151653 3 65 20618662 32947201 31347 16776704 0 275217595 99.629 267596269 20646 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 03:49:21] CVMFS is ok
[2025-10-13 03:49:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:49:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:49:21] Further information can be found at the LHC@home message board.
[2025-10-13 03:49:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:49:21] Checking for apptainer binary...
[2025-10-13 03:49:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:49:21] Running /usr/bin/apptainer --version
[2025-10-13 03:49:21] apptainer version 1.4.3-1.el9
[2025-10-13 03:49:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:49:22] c6-6-8-1.aglt2.org
[2025-10-13 03:49:22] apptainer works
[2025-10-13 03:49:22] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:49:22] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:49:22] Starting ATLAS job with PandaID=6841766410
[2025-10-13 03:49:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:27:48]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:27:49] 2025-10-13 12:27:10,661 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:27:49] 2025-10-13 12:27:10,672 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:27:49] 2025-10-13 12:27:10,673 | INFO     | sum of square deviations: 5968658046.757436
[2025-10-13 08:27:49] 2025-10-13 12:27:10,679 | INFO     | sum of deviations: 92060813900.1755
[2025-10-13 08:27:49] 2025-10-13 12:27:10,679 | INFO     | mean x: 1760350183.824627
[2025-10-13 08:27:49] 2025-10-13 12:27:10,679 | INFO     | mean y: 2073717.0037313432
[2025-10-13 08:27:49] 2025-10-13 12:27:10,679 | INFO     | -- intersect: -27149635997.755333
[2025-10-13 08:27:49] 2025-10-13 12:27:10,680 | INFO     | intersect: -27149635997.755333
[2025-10-13 08:27:49] 2025-10-13 12:27:10,713 | INFO     | chi2: 4.357033492645614
[2025-10-13 08:27:49] 2025-10-13 12:27:10,714 | INFO     | sum of square deviations: 5640808666.220514
[2025-10-13 08:27:49] 2025-10-13 12:27:10,732 | INFO     | sum of deviations: 106614360155.15973
[2025-10-13 08:27:49] 2025-10-13 12:27:10,732 | INFO     | mean x: 1760350031.3307984
[2025-10-13 08:27:49] 2025-10-13 12:27:10,732 | INFO     | mean y: 2080384.2395437262
[2025-10-13 08:27:49] 2025-10-13 12:27:10,732 | INFO     | -- intersect: -33269495261.171932
[2025-10-13 08:27:49] 2025-10-13 12:27:10,732 | INFO     | intersect: -33269495261.171932
[2025-10-13 08:27:49] 2025-10-13 12:27:10,733 | INFO     | chi2: 3.619317704853753
[2025-10-13 08:27:49] 2025-10-13 12:27:10,733 | INFO     | current chi2=3.619317704853753 (change=16.931606999052832 %)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,733 | INFO     | right removable region: 262
[2025-10-13 08:27:49] 2025-10-13 12:27:10,733 | INFO     | sum of square deviations: 5640755596.2205105
[2025-10-13 08:27:49] 2025-10-13 12:27:10,796 | INFO     | monitor loop #976: job 0:6841766410 is in state 'finished'
[2025-10-13 08:27:49] 2025-10-13 12:27:10,796 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,797 | INFO     | sum of deviations: 33079312622.07602
[2025-10-13 08:27:49] 2025-10-13 12:27:10,797 | INFO     | mean x: 1760350336.3307984
[2025-10-13 08:27:49] 2025-10-13 12:27:10,797 | INFO     | mean y: 2101074.114068441
[2025-10-13 08:27:49] 2025-10-13 12:27:10,797 | INFO     | -- intersect: -10321193049.616434
[2025-10-13 08:27:49] 2025-10-13 12:27:10,797 | INFO     | intersect: -10321193049.616434
[2025-10-13 08:27:49] 2025-10-13 12:27:10,798 | INFO     | chi2: 1.6758353291429073
[2025-10-13 08:27:49] 2025-10-13 12:27:10,798 | INFO     | current chi2=1.6758353291429073 (change=61.53724014351491 %)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,798 | INFO     | sum of square deviations: 5325118018.496109
[2025-10-13 08:27:49] 2025-10-13 12:27:10,800 | INFO     | sum of deviations: 4747112088.263563
[2025-10-13 08:27:49] 2025-10-13 12:27:10,800 | INFO     | mean x: 1760350488.8294573
[2025-10-13 08:27:49] 2025-10-13 12:27:10,800 | INFO     | mean y: 2114730.596899225
[2025-10-13 08:27:49] 2025-10-13 12:27:10,800 | INFO     | -- intersect: -1567161491.2778995
[2025-10-13 08:27:49] 2025-10-13 12:27:10,800 | INFO     | intersect: -1567161491.2778995
[2025-10-13 08:27:49] 2025-10-13 12:27:10,807 | INFO     | chi2: 1.0952232888581035
[2025-10-13 08:27:49] 2025-10-13 12:27:10,807 | INFO     | current chi2=1.0952232888581035 (change=34.64612722908481 %)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,808 | INFO     | sum of square deviations: 5021511897.067149
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | sum of deviations: -9761034400.577074
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | mean x: 1760350641.320158
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | mean y: 2122006.42687747
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | -- intersect: 3423968557.66969
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | intersect: 3423968557.66969
[2025-10-13 08:27:49] 2025-10-13 12:27:10,810 | INFO     | chi2: 0.9351010928433534
[2025-10-13 08:27:49] 2025-10-13 12:27:10,811 | INFO     | current chi2=0.9351010928433534 (change=14.62005032614819 %)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,811 | INFO     | left removable region: 30
[2025-10-13 08:27:49] 2025-10-13 12:27:10,833 | INFO     | sum of square deviations: 3872081511.0301795
[2025-10-13 08:27:49] 2025-10-13 12:27:10,835 | INFO     | sum of deviations: 6399815772.935345
[2025-10-13 08:27:49] 2025-10-13 12:27:10,835 | INFO     | mean x: 1760350915.814655
[2025-10-13 08:27:49] 2025-10-13 12:27:10,835 | INFO     | mean y: 2129932.254310345
[2025-10-13 08:27:49] 2025-10-13 12:27:10,835 | INFO     | -- intersect: -2907395997.1041536
[2025-10-13 08:27:49] 2025-10-13 12:27:10,836 | INFO     | intersect: -2907395997.1041536
[2025-10-13 08:27:49] 2025-10-13 12:27:10,836 | INFO     | chi2: 0.09878430535162086
[2025-10-13 08:27:49] 2025-10-13 12:27:10,836 | INFO     | -- intersect: -2907395997.1041536
[2025-10-13 08:27:49] 2025-10-13 12:27:10,836 | INFO     | current memory leak: 1.65 B/s (using 232 data points, chi2=0.10)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,862 | INFO     | could have reported an average CPU frequency of 2585 MHz (12 samples)
[2025-10-13 08:27:49] 2025-10-13 12:27:10,862 | INFO     | ..............................
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . Timing measurements:
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . get job = 0 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . initial setup = 10 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . payload setup = 62 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . stage-in = 0 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . payload execution = 16371 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . stage-out = 5 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | . log creation = 0 s
[2025-10-13 08:27:49] 2025-10-13 12:27:10,863 | INFO     | ..............................
[2025-10-13 08:27:49] 2025-10-13 12:27:11,450 | INFO     | 
[2025-10-13 08:27:49] 2025-10-13 12:27:11,450 | INFO     | job summary report
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | --------------------------------------------------
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | PanDA job id: 6841766410
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | task id: 46676269
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | errors: (none)
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | pilot state: finished 
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | transexitcode: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | exeerrorcode: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | exeerrordiag: 
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | exitcode: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | exitmsg: OK
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | cpuconsumptiontime: 45228 s
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | nevents: 400
[2025-10-13 08:27:49] 2025-10-13 12:27:11,451 | INFO     | neventsw: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | pid: 4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | pgrp: 4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | corecount: 8
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | event service: False
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | sizes: {0: 2348635, 1: 2348635, 2: 2348862, 13: 2348862, 24: 2348918, 35: 2348946, 40: 2349364, 47: 2349392, 16439: 2380606, 16445: 2389604, 16448: 2389660, 16488:
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | --------------------------------------------------
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | 
[2025-10-13 08:27:49] 2025-10-13 12:27:11,452 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:27:49] 2025-10-13 12:27:11,558 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,559 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,560 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:27:49] 2025-10-13 12:27:11,561 | INFO     | job 6841766410 has completed (purged errors)
[2025-10-13 08:27:49] 2025-10-13 12:27:11,561 | INFO     | overall cleanup function is called
[2025-10-13 08:27:49] 2025-10-13 12:27:12,599 | INFO     | --- collectZombieJob: --- 10, [4138158]
[2025-10-13 08:27:49] 2025-10-13 12:27:12,599 | INFO     | zombie collector waiting for pid 4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:12,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:27:49] 2025-10-13 12:27:12,599 | INFO     | collected zombie processes
[2025-10-13 08:27:49] 2025-10-13 12:27:12,599 | INFO     | will attempt to kill all subprocesses of pid=4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:14,645 | INFO     | process IDs to be killed: [4138158] (in reverse order)
[2025-10-13 08:27:49] 2025-10-13 12:27:15,070 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:27:49] 2025-10-13 12:27:15,071 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:27:49] 2025-10-13 12:27:15,338 | INFO     | did not find any defunct processes belonging to 4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:15,386 | INFO     | did not find any defunct processes belonging to 4138158
[2025-10-13 08:27:49] 2025-10-13 12:27:15,386 | INFO     | ready for new job
[2025-10-13 08:27:49] 2025-10-13 12:27:15,386 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:27:49] 2025-10-13 12:27:15,389 | INFO     | ***************************************
[2025-10-13 08:27:49] 2025-10-13 12:27:15,389 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:27:49] 2025-10-13 12:27:15,390 | INFO     | ***************************************
[2025-10-13 08:27:49] 2025-10-13 12:27:15,390 | INFO     | 
[2025-10-13 08:27:49] 2025-10-13 12:27:15,413 | INFO     | architecture information:
[2025-10-13 08:27:49] 2025-10-13 12:27:15,426 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:27:49] 2025-10-13 12:27:15,504 | INFO     | cat /etc/os-release:
[2025-10-13 08:27:49] NAME="CentOS Linux"
[2025-10-13 08:27:49] VERSION="7 (Core)"
[2025-10-13 08:27:49] ID="centos"
[2025-10-13 08:27:49] ID_LIKE="rhel fedora"
[2025-10-13 08:27:49] VERSION_ID="7"
[2025-10-13 08:27:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:27:49] ANSI_COLOR="0;31"
[2025-10-13 08:27:49] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:27:49] HOME_URL="https://www.centos.org/"
[2025-10-13 08:27:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:27:49] 
[2025-10-13 08:27:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:27:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:27:49] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:27:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:27:49] 
[2025-10-13 08:27:49] 2025-10-13 12:27:15,505 | INFO     | ***************************************
[2025-10-13 08:27:49] 2025-10-13 12:27:16,009 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:27:49] 2025-10-13 12:27:16,128 | INFO     | sufficient remaining disk space (73635201024 B)
[2025-10-13 08:27:49] 2025-10-13 12:27:16,129 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:27:49] 2025-10-13 12:27:16,129 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:27:49] 2025-10-13 12:27:16,129 | INFO     | update_server=False
[2025-10-13 08:27:49] 2025-10-13 12:27:16,129 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:27:49] 2025-10-13 12:27:16,356 | INFO     | all data control threads have been joined
[2025-10-13 08:27:49] 2025-10-13 12:27:16,526 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:27:49] 2025-10-13 12:27:16,778 | INFO     | all payload control threads have been joined
[2025-10-13 08:27:49] 2025-10-13 12:27:16,876 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:27:49] 2025-10-13 12:27:16,876 | INFO     | aborting loop
[2025-10-13 08:27:49] 2025-10-13 12:27:17,135 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,162 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:27:49] 2025-10-13 12:27:17,363 | INFO     | [data] control thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,517 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,518 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,532 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,728 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,785 | INFO     | [payload] control thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:17,789 | INFO     | all job control threads have been joined
[2025-10-13 08:27:49] 2025-10-13 12:27:17,883 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,039 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,151 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,534 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,535 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,537 | INFO     | [job] validate thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:18,590 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:27:49] 2025-10-13 12:27:18,794 | INFO     | [job] control thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:19,171 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:22,612 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:27:49] 2025-10-13 12:27:30,163 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:27:49] 2025-10-13 12:27:31,758 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140132707845952)>', '<ExcThread(monitor, started 140132199937792)>']
[2025-10-13 08:27:49] 2025-10-13 12:27:36,784 | INFO     | all workflow threads have been joined
[2025-10-13 08:27:49] 2025-10-13 12:27:36,784 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:27:49] 2025-10-13 12:27:36,785 | INFO     | traces error code: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:36,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:27:49] 2025-10-13 12:27:46,864 | INFO     | PID=4126726 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:27:49] 2025-10-13 12:27:46,864 | INFO     | .. there are 35 such processes running
[2025-10-13 08:27:49] 2025-10-13 12:27:46,865 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:27:49] 2025-10-13 12:27:46,865 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:27:49] 2025-10-13 12:27:46,865 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:27:49] 2025-10-13 12:27:46,865 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:27:49] 2025-10-13 12:27:46,865 | INFO     | [monitor] control thread has ended
[2025-10-13 08:27:49] 2025-10-13 12:27:47,344 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:27:49] 2025-10-13 12:27:47,364 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:27:49] 2025-10-13 12:27:47,411 [wrapper] pilotpid: 4126726
[2025-10-13 08:27:49] 2025-10-13 12:27:47,428 [wrapper] Pilot exit status: 0
[2025-10-13 08:27:49] 2025-10-13 12:27:47,530 [wrapper] pandaids: 6841766410
[2025-10-13 08:27:49] 2025-10-13 12:27:48,363 [wrapper] cleanup supervisor_pilot  829067 4126727
[2025-10-13 08:27:49] 2025-10-13 12:27:48,374 [wrapper] Test setup, not cleaning
[2025-10-13 08:27:49] 2025-10-13 12:27:48,390 [wrapper] apfmon messages muted
[2025-10-13 08:27:49] 2025-10-13 12:27:48,430 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:27:49] 2025-10-13 12:27:48,451 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:27:49]  *** Error codes and diagnostics ***
[2025-10-13 08:27:49]     "exeErrorCode": 0,
[2025-10-13 08:27:49]     "exeErrorDiag": "",
[2025-10-13 08:27:49]     "pilotErrorCode": 0,
[2025-10-13 08:27:49]     "pilotErrorDiag": "",
[2025-10-13 08:27:49]  *** Listing of results directory ***
[2025-10-13 08:27:49] total 410520
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 23:02 pilot3.tar.gz
[2025-10-13 08:27:49] -rwx------ 1 boincer umatlas     36292 Oct 12 23:04 runpilot2-wrapper.sh
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 23:04 queuedata.json
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas       100 Oct 13 03:49 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:27:49] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 03:49 run_atlas
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas       105 Oct 13 03:49 job.xml
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas 219703319 Oct 13 03:49 EVNT.46676267._002550.pool.root.1
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:49 start_atlas.sh
[2025-10-13 08:27:49] drwxrwx--x 2 boincer umatlas      4096 Oct 13 03:49 shared
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 03:49 input.tar.gz
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas         0 Oct 13 03:49 boinc_lockfile
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 03:49 pandaJob.out
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas    972849 Oct 13 03:50 agis_schedconf.cvmfs.json
[2025-10-13 08:27:49] drwx------ 5 boincer umatlas      4096 Oct 13 03:51 pilot3
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas 191814411 Oct 13 08:25 HITS.46676269._095474.pool.root.1
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas       531 Oct 13 08:25 boinc_task_state.xml
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas      1044 Oct 13 08:26 memory_monitor_summary.json
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas   1560580 Oct 13 08:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas    476891 Oct 13 08:26 log.46676269._095474.job.log.tgz.1
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas      7830 Oct 13 08:27 heartbeat.json
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas      6858 Oct 13 08:27 init_data.xml
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:27 boinc_mmap_file
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas        28 Oct 13 08:27 wrapper_checkpoint.txt
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas       823 Oct 13 08:27 pilotlog.txt
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas        95 Oct 13 08:27 pilot_heartbeat.json
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas   2003638 Oct 13 08:27 log.46676269._095474.job.log.1
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas       357 Oct 13 08:27 output.list
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:27 runtime_log
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas   2498560 Oct 13 08:27 result.tar.gz
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas       656 Oct 13 08:27 wsdMDmg2NS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBamNDmGsD5Lo.diag
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 08:27 runtime_log.err
[2025-10-13 08:27:49] -rw-r--r-- 1 boincer umatlas     21087 Oct 13 08:27 stderr.txt
[2025-10-13 08:27:49] HITS file was successfully produced:
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas 191814411 Oct 13 08:25 shared/HITS.pool.root.1
[2025-10-13 08:27:49]  *** Contents of shared directory: ***
[2025-10-13 08:27:49] total 404896
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas 219703319 Oct 13 03:49 ATLAS.root_0
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:49 start_atlas.sh
[2025-10-13 08:27:49] -rw-r--r-- 2 boincer umatlas    569676 Oct 13 03:49 input.tar.gz
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas 191814411 Oct 13 08:25 HITS.pool.root.1
[2025-10-13 08:27:49] -rw------- 1 boincer umatlas   2498560 Oct 13 08:27 result.tar.gz
08:27:50 (4120615): run_atlas exited; CPU time 46060.053694
08:27:50 (4120615): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN