Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:31:23 (352976): wrapper (7.7.26015): starting
06:31:23 (352976): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 06:31:23] Arguments: --nthreads 8
[2025-10-13 06:31:23] Threads: 8
[2025-10-13 06:31:23] Checking for CVMFS
[2025-10-13 06:31:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 06:31:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 06:31:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 06:31:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 06:31:24] 2.13.2.0 5158 7003 103624 151658 1 135 20830774 40960001 20796 16776704 0 21151537 99.897 3515200 30718 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 06:31:24] CVMFS is ok
[2025-10-13 06:31:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 06:31:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 06:31:24] Further information can be found at the LHC@home message board.
[2025-10-13 06:31:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 06:31:24] Checking for apptainer binary...
[2025-10-13 06:31:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 06:31:24] Running /usr/bin/apptainer --version
[2025-10-13 06:31:24] apptainer version 1.4.3-1.el9
[2025-10-13 06:31:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 06:31:24] c-212-13.aglt2.org
[2025-10-13 06:31:24] apptainer works
[2025-10-13 06:31:24] Set ATHENA_PROC_NUMBER=8
[2025-10-13 06:31:24] Set ATHENA_CORE_NUMBER=8
[2025-10-13 06:31:24] Starting ATLAS job with PandaID=6841540189
[2025-10-13 06:31:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 09:07:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 09:07:05] 2025-10-13 13:06:18,435 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 09:07:05] 2025-10-13 13:06:18,436 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 09:07:05] 2025-10-13 13:06:18,436 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 09:07:05] 2025-10-13 13:06:18,439 | INFO     | fitting pss+swap vs Time
[2025-10-13 09:07:05] 2025-10-13 13:06:18,439 | INFO     | sum of square deviations: 1088830630.8421052
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | sum of deviations: -25763981193.31579
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | mean x: 1760356145.6842105
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | mean y: 2538808.6184210526
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | -- intersect: 41656200403.23126
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | intersect: 41656200403.23126
[2025-10-13 09:07:05] 2025-10-13 13:06:18,448 | INFO     | chi2: 2.2314552505322163
[2025-10-13 09:07:05] 2025-10-13 13:06:18,449 | INFO     | sum of square deviations: 984874430.6666682
[2025-10-13 09:07:05] 2025-10-13 13:06:18,449 | INFO     | sum of deviations: -15366106460.809532
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | mean x: 1760355993.1904762
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | mean y: 2553692.993197279
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | -- intersect: 27467798761.827763
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | intersect: 27467798761.827763
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | chi2: 1.560288282490541
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | current chi2=1.560288282490541 (change=30.077545488828317 %)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,450 | INFO     | sum of square deviations: 887755567.9788727
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | sum of deviations: -14571550313.274654
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | mean x: 1760355840.6971831
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | mean y: 2554941.063380282
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | -- intersect: 28896897739.030907
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | intersect: 28896897739.030907
[2025-10-13 09:07:05] 2025-10-13 13:06:18,451 | INFO     | chi2: 1.556814085455724
[2025-10-13 09:07:05] 2025-10-13 13:06:18,452 | INFO     | current chi2=1.556814085455724 (change=0.22266379064717276 %)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,452 | INFO     | right removable region: 141
[2025-10-13 09:07:05] 2025-10-13 13:06:18,452 | INFO     | sum of square deviations: 984857350.6666682
[2025-10-13 09:07:05] 2025-10-13 13:06:18,452 | INFO     | sum of deviations: -45770084199.80953
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | mean x: 1760356298.1904762
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | mean y: 2567639.2789115645
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | -- intersect: 81813051091.83443
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | intersect: 81813051091.83443
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | chi2: 0.9297168501060397
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | current chi2=0.9297168501060397 (change=58.33585056727907 %)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,453 | INFO     | sum of square deviations: 887730374.366199
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | sum of deviations: -39527553608.197174
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | mean x: 1760356450.690141
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | mean y: 2557823.8591549294
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | -- intersect: 78385123052.48413
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | intersect: 78385123052.48413
[2025-10-13 09:07:05] 2025-10-13 13:06:18,454 | INFO     | chi2: 0.9217973677353705
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | current chi2=0.9217973677353705 (change=0.8518165901549415 %)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | left removable region: 20
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | sum of square deviations: 549235363.2396694
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | sum of deviations: -15512525503.520666
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | mean x: 1760356420.198347
[2025-10-13 09:07:05] 2025-10-13 13:06:18,455 | INFO     | mean y: 2551255.396694215
[2025-10-13 09:07:05] 2025-10-13 13:06:18,456 | INFO     | -- intersect: 49721807682.257576
[2025-10-13 09:07:05] 2025-10-13 13:06:18,456 | INFO     | intersect: 49721807682.257576
[2025-10-13 09:07:05] 2025-10-13 13:06:18,456 | INFO     | chi2: 0.16312787471528198
[2025-10-13 09:07:05] 2025-10-13 13:06:18,456 | INFO     | -- intersect: 49721807682.257576
[2025-10-13 09:07:05] 2025-10-13 13:06:18,456 | INFO     | current memory leak: -28.24 B/s (using 121 data points, chi2=0.16)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | could have reported an average CPU frequency of 2929 MHz (9 samples)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | ..............................
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . Timing measurements:
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . get job = 0 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . initial setup = 2 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . payload setup = 10 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . stage-in = 0 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . payload execution = 9228 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . stage-out = 1 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | . log creation = 0 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,457 | INFO     | ..............................
[2025-10-13 09:07:05] 2025-10-13 13:06:18,559 | INFO     | 
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | job summary report
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | --------------------------------------------------
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | PanDA job id: 6841540189
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | task id: 46676269
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | errors: (none)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | pilot state: finished 
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | transexitcode: 0
[2025-10-13 09:07:05] 2025-10-13 13:06:18,560 | INFO     | exeerrorcode: 0
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | exeerrordiag: 
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | exitcode: 0
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | exitmsg: OK
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | cpuconsumptiontime: 37489 s
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | nevents: 400
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | neventsw: 0
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | pid: 369324
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | pgrp: 369324
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | corecount: 8
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | event service: False
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | sizes: {0: 2348635, 1: 2348834, 8: 2349096, 11: 2349124, 9243: 2377549, 9246: 2386731, 9256: 2386933}
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | --------------------------------------------------
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | 
[2025-10-13 09:07:05] 2025-10-13 13:06:18,561 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 09:07:05] 2025-10-13 13:06:18,599 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,599 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,599 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | job 6841540189 has completed (purged errors)
[2025-10-13 09:07:05] 2025-10-13 13:06:18,601 | INFO     | overall cleanup function is called
[2025-10-13 09:07:05] 2025-10-13 13:06:19,610 | INFO     | --- collectZombieJob: --- 10, [369324]
[2025-10-13 09:07:05] 2025-10-13 13:06:19,611 | INFO     | zombie collector waiting for pid 369324
[2025-10-13 09:07:05] 2025-10-13 13:06:19,640 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 09:07:05] 2025-10-13 13:06:19,641 | INFO     | collected zombie processes
[2025-10-13 09:07:05] 2025-10-13 13:06:19,641 | INFO     | will attempt to kill all subprocesses of pid=369324
[2025-10-13 09:07:05] 2025-10-13 13:06:20,049 | INFO     | process IDs to be killed: [369324] (in reverse order)
[2025-10-13 09:07:05] 2025-10-13 13:06:20,184 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 09:07:05] 2025-10-13 13:06:20,185 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 09:07:05] 2025-10-13 13:06:20,243 | INFO     | did not find any defunct processes belonging to 369324
[2025-10-13 09:07:05] 2025-10-13 13:06:20,258 | INFO     | did not find any defunct processes belonging to 369324
[2025-10-13 09:07:05] 2025-10-13 13:06:20,259 | INFO     | ready for new job
[2025-10-13 09:07:05] 2025-10-13 13:06:20,259 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 09:07:05] 2025-10-13 13:06:20,261 | INFO     | ***************************************
[2025-10-13 09:07:05] 2025-10-13 13:06:20,261 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 09:07:05] 2025-10-13 13:06:20,261 | INFO     | ***************************************
[2025-10-13 09:07:05] 2025-10-13 13:06:20,261 | INFO     | 
[2025-10-13 09:07:05] 2025-10-13 13:06:20,265 | INFO     | architecture information:
[2025-10-13 09:07:05] 2025-10-13 13:06:20,266 | INFO     | executing command: cat /etc/os-release
[2025-10-13 09:07:05] 2025-10-13 13:06:20,289 | INFO     | cat /etc/os-release:
[2025-10-13 09:07:05] NAME="CentOS Linux"
[2025-10-13 09:07:05] VERSION="7 (Core)"
[2025-10-13 09:07:05] ID="centos"
[2025-10-13 09:07:05] ID_LIKE="rhel fedora"
[2025-10-13 09:07:05] VERSION_ID="7"
[2025-10-13 09:07:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 09:07:05] ANSI_COLOR="0;31"
[2025-10-13 09:07:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 09:07:05] HOME_URL="https://www.centos.org/"
[2025-10-13 09:07:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 09:07:05] 
[2025-10-13 09:07:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 09:07:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 09:07:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 09:07:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 09:07:05] 
[2025-10-13 09:07:05] 2025-10-13 13:06:20,290 | INFO     | ***************************************
[2025-10-13 09:07:05] 2025-10-13 13:06:20,797 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 09:07:05] 2025-10-13 13:06:20,852 | INFO     | sufficient remaining disk space (129263206400 B)
[2025-10-13 09:07:05] 2025-10-13 13:06:20,852 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 09:07:05] 2025-10-13 13:06:20,852 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 09:07:05] 2025-10-13 13:06:20,853 | INFO     | update_server=False
[2025-10-13 09:07:05] 2025-10-13 13:06:20,853 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 09:07:05] 2025-10-13 13:06:20,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 09:07:05] 2025-10-13 13:06:20,910 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:07:05] 2025-10-13 13:06:20,910 | INFO     | aborting loop
[2025-10-13 09:07:05] 2025-10-13 13:06:21,339 | INFO     | all job control threads have been joined
[2025-10-13 09:07:05] 2025-10-13 13:06:21,398 | INFO     | all data control threads have been joined
[2025-10-13 09:07:05] 2025-10-13 13:06:21,861 | INFO     | [job] retrieve thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:21,917 | INFO     | [job] job monitor thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:21,930 | INFO     | [payload] failed_post thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:21,976 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:21,978 | INFO     | [job] validate thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,217 | INFO     | all payload control threads have been joined
[2025-10-13 09:07:05] 2025-10-13 13:06:22,281 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,346 | INFO     | [job] control thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,373 | INFO     | [payload] validate_post thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,405 | INFO     | [data] control thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,860 | INFO     | [data] copytool_out thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:22,916 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:23,131 | INFO     | [data] copytool_in thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:23,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:23,225 | INFO     | [payload] control thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:23,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 09:07:05] 2025-10-13 13:06:23,573 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 09:07:05] 2025-10-13 13:06:24,579 | INFO     | [job] queue monitor thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:27,557 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 09:07:05] 2025-10-13 13:06:51,204 | INFO     | PID=356668 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 09:07:05] 2025-10-13 13:06:51,205 | INFO     | .. there are 14 such processes running
[2025-10-13 09:07:05] 2025-10-13 13:06:51,206 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 09:07:05] 2025-10-13 13:06:51,206 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 09:07:05] 2025-10-13 13:06:51,206 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 09:07:05] 2025-10-13 13:06:58,563 | INFO     | [monitor] cgroup control has ended
[2025-10-13 09:07:05] 2025-10-13 13:06:59,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699800213312)>', '<ExcThread(monitor, started 140699009795840)>']
[2025-10-13 09:07:05] 2025-10-13 13:07:00,258 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 09:07:05] 2025-10-13 13:07:00,259 | INFO     | [monitor] control thread has ended
[2025-10-13 09:07:05] 2025-10-13 13:07:04,746 | INFO     | all workflow threads have been joined
[2025-10-13 09:07:05] 2025-10-13 13:07:04,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 09:07:05] 2025-10-13 13:07:04,746 | INFO     | traces error code: 0
[2025-10-13 09:07:05] 2025-10-13 13:07:04,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 09:07:05] 2025-10-13 13:07:05,026 [wrapper] ==== pilot stdout END ====
[2025-10-13 09:07:05] 2025-10-13 13:07:05,036 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 09:07:05] 2025-10-13 13:07:05,038 [wrapper] pilotpid: 356668
[2025-10-13 09:07:05] 2025-10-13 13:07:05,040 [wrapper] Pilot exit status: 0
[2025-10-13 09:07:05] 2025-10-13 13:07:05,130 [wrapper] pandaids: 6841540189
[2025-10-13 09:07:05] 2025-10-13 13:07:05,242 [wrapper] cleanup supervisor_pilot  668562 356669
[2025-10-13 09:07:05] 2025-10-13 13:07:05,265 [wrapper] Test setup, not cleaning
[2025-10-13 09:07:05] 2025-10-13 13:07:05,272 [wrapper] apfmon messages muted
[2025-10-13 09:07:05] 2025-10-13 13:07:05,275 [wrapper] ==== wrapper stdout END ====
[2025-10-13 09:07:05] 2025-10-13 13:07:05,278 [wrapper] ==== wrapper stderr END ====
[2025-10-13 09:07:05]  *** Error codes and diagnostics ***
[2025-10-13 09:07:05]     "exeErrorCode": 0,
[2025-10-13 09:07:05]     "exeErrorDiag": "",
[2025-10-13 09:07:05]     "pilotErrorCode": 0,
[2025-10-13 09:07:05]     "pilotErrorDiag": "",
[2025-10-13 09:07:05]  *** Listing of results directory ***
[2025-10-13 09:07:05] total 409264
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:49 queuedata.json
[2025-10-13 09:07:05] -rwx------. 1 boincer umatlas     36292 Oct 12 22:49 runpilot2-wrapper.sh
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas       100 Oct 13 06:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 09:07:05] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 06:31 run_atlas
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas       105 Oct 13 06:31 job.xml
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas 222959916 Oct 13 06:31 EVNT.46676267._002448.pool.root.1
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:31 start_atlas.sh
[2025-10-13 09:07:05] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 06:31 shared
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 06:31 input.tar.gz
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas         0 Oct 13 06:31 boinc_lockfile
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 06:31 pandaJob.out
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas    972497 Oct 13 06:31 agis_schedconf.cvmfs.json
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:31 agis_ddmendpoints.agis.ALL.json
[2025-10-13 09:07:05] drwx------. 5 boincer umatlas      4096 Oct 13 06:31 pilot3
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 09:02 init_data.xml
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas 188911288 Oct 13 09:05 HITS.46676269._095283.pool.root.1
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas       530 Oct 13 09:05 boinc_task_state.xml
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas      1048 Oct 13 09:06 memory_monitor_summary.json
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas    386813 Oct 13 09:06 log.46676269._095283.job.log.tgz.1
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas      7794 Oct 13 09:06 heartbeat.json
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas        95 Oct 13 09:06 pilot_heartbeat.json
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 09:07 boinc_mmap_file
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas        27 Oct 13 09:07 wrapper_checkpoint.txt
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas      4824 Oct 13 09:07 pilotlog.txt
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas   1269646 Oct 13 09:07 log.46676269._095283.job.log.1
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas       357 Oct 13 09:07 output.list
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas       620 Oct 13 09:07 runtime_log
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas   1679360 Oct 13 09:07 result.tar.gz
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 09:07 runtime_log.err
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas       656 Oct 13 09:07 9L0KDmCoNS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmhXmNDmwK3zPn.diag
[2025-10-13 09:07:05] -rw-r--r--. 1 boincer umatlas     20948 Oct 13 09:07 stderr.txt
[2025-10-13 09:07:05] HITS file was successfully produced:
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas 188911288 Oct 13 09:05 shared/HITS.pool.root.1
[2025-10-13 09:07:05]  *** Contents of shared directory: ***
[2025-10-13 09:07:05] total 404444
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas 222959916 Oct 13 06:31 ATLAS.root_0
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 06:31 start_atlas.sh
[2025-10-13 09:07:05] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 06:31 input.tar.gz
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas 188911288 Oct 13 09:05 HITS.pool.root.1
[2025-10-13 09:07:05] -rw-------. 1 boincer umatlas   1679360 Oct 13 09:07 result.tar.gz
09:07:07 (352976): run_atlas exited; CPU time 37711.141469
09:07:07 (352976): called boinc_finish(0)

</stderr_txt>
]]>

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