Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:22:05 (21075): wrapper (7.7.26015): starting
18:22:05 (21075): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 18:22:05] Arguments: --nthreads 8
[2025-10-13 18:22:05] Threads: 8
[2025-10-13 18:22:05] Checking for CVMFS
[2025-10-13 18:22:06] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:22:06] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:22:06] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:22:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:22:08] 2.11.2.0 21973 19462 71792 151667 2 60 16996916 25165824 4632 130560 0 6233933 99.970 2043179 1364 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 18:22:08] CVMFS is ok
[2025-10-13 18:22:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:22:08] Checking for apptainer binary...
[2025-10-13 18:22:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:22:08] Running /usr/bin/apptainer --version
[2025-10-13 18:22:08] apptainer version 1.3.2-1.el7
[2025-10-13 18:22:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:22:10] cg-vwn333.simple-grid.lan
[2025-10-13 18:22:10] apptainer works
[2025-10-13 18:22:10] Set ATHENA_PROC_NUMBER=8
[2025-10-13 18:22:10] Set ATHENA_CORE_NUMBER=8
[2025-10-13 18:22:10] Starting ATLAS job with PandaID=6841511023
[2025-10-13 18:22:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:40:23]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:40:23] 2025-10-13 20:39:43,620 | INFO     | mean y: 2451260.8962655603
[2025-10-13 22:40:23] 2025-10-13 20:39:43,620 | INFO     | -- intersect: -25443526405.186794
[2025-10-13 22:40:23] 2025-10-13 20:39:43,620 | INFO     | intersect: -25443526405.186794
[2025-10-13 22:40:23] 2025-10-13 20:39:43,620 | INFO     | chi2: 7.070483123629079
[2025-10-13 22:40:23] 2025-10-13 20:39:43,621 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,623 | INFO     | sum of deviations: 77096197703.5
[2025-10-13 22:40:23] 2025-10-13 20:39:43,623 | INFO     | mean x: 1760380396.5
[2025-10-13 22:40:23] 2025-10-13 20:39:43,623 | INFO     | mean y: 2459382.944915254
[2025-10-13 22:40:23] 2025-10-13 20:39:43,623 | INFO     | -- intersect: -33296667638.84002
[2025-10-13 22:40:23] 2025-10-13 20:39:43,623 | INFO     | intersect: -33296667638.84002
[2025-10-13 22:40:23] 2025-10-13 20:39:43,624 | INFO     | chi2: 6.365544097255528
[2025-10-13 22:40:23] 2025-10-13 20:39:43,624 | INFO     | current chi2=6.365544097255528 (change=9.970167724715898 %)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,624 | INFO     | right removable region: 235
[2025-10-13 22:40:23] 2025-10-13 20:39:43,624 | INFO     | sum of square deviations: 4075741535.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,626 | INFO     | sum of deviations: -20692839954.500008
[2025-10-13 22:40:23] 2025-10-13 20:39:43,626 | INFO     | mean x: 1760380701.5
[2025-10-13 22:40:23] 2025-10-13 20:39:43,626 | INFO     | mean y: 2499308.622881356
[2025-10-13 22:40:23] 2025-10-13 20:39:43,627 | INFO     | -- intersect: 8940081783.447294
[2025-10-13 22:40:23] 2025-10-13 20:39:43,627 | INFO     | intersect: 8940081783.447294
[2025-10-13 22:40:23] 2025-10-13 20:39:43,635 | INFO     | chi2: 2.2585605199854486
[2025-10-13 22:40:23] 2025-10-13 20:39:43,635 | INFO     | current chi2=2.2585605199854486 (change=68.05648948602266 %)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,636 | INFO     | sum of square deviations: 3822136780.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,638 | INFO     | sum of deviations: -58842657286.000015
[2025-10-13 22:40:23] 2025-10-13 20:39:43,638 | INFO     | mean x: 1760380854.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,638 | INFO     | mean y: 2522097.147186147
[2025-10-13 22:40:23] 2025-10-13 20:39:43,639 | INFO     | -- intersect: 27103982156.553547
[2025-10-13 22:40:23] 2025-10-13 20:39:43,639 | INFO     | intersect: 27103982156.553547
[2025-10-13 22:40:23] 2025-10-13 20:39:43,639 | INFO     | chi2: 0.989180690899197
[2025-10-13 22:40:23] 2025-10-13 20:39:43,639 | INFO     | current chi2=0.989180690899197 (change=56.20304693426722 %)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,640 | INFO     | sum of square deviations: 3579276412.5
[2025-10-13 22:40:23] 2025-10-13 20:39:43,642 | INFO     | sum of deviations: -57039162335.00001
[2025-10-13 22:40:23] 2025-10-13 20:39:43,642 | INFO     | mean x: 1760381006.5
[2025-10-13 22:40:23] 2025-10-13 20:39:43,642 | INFO     | mean y: 2520931.4424778763
[2025-10-13 22:40:23] 2025-10-13 20:39:43,642 | INFO     | -- intersect: 28055860888.797394
[2025-10-13 22:40:23] 2025-10-13 20:39:43,642 | INFO     | intersect: 28055860888.797394
[2025-10-13 22:40:23] 2025-10-13 20:39:43,643 | INFO     | chi2: 0.9755820250345746
[2025-10-13 22:40:23] 2025-10-13 20:39:43,643 | INFO     | current chi2=0.9755820250345746 (change=1.3747403269933236 %)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,643 | INFO     | left removable region: 30
[2025-10-13 22:40:23] 2025-10-13 20:39:43,643 | INFO     | sum of square deviations: 2671343110.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,645 | INFO     | sum of deviations: -18530359119.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,645 | INFO     | mean x: 1760381281.0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,645 | INFO     | mean y: 2514946.6585365855
[2025-10-13 22:40:23] 2025-10-13 20:39:43,645 | INFO     | -- intersect: 12213786947.317131
[2025-10-13 22:40:23] 2025-10-13 20:39:43,646 | INFO     | intersect: 12213786947.317131
[2025-10-13 22:40:23] 2025-10-13 20:39:43,646 | INFO     | chi2: 0.1252408533810619
[2025-10-13 22:40:23] 2025-10-13 20:39:43,646 | INFO     | -- intersect: 12213786947.317131
[2025-10-13 22:40:23] 2025-10-13 20:39:43,646 | INFO     | current memory leak: -6.94 B/s (using 205 data points, chi2=0.13)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | ..............................
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | . Timing measurements:
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | . get job = 0 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | . initial setup = 8 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | . payload setup = 133 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,647 | INFO     | . stage-in = 0 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,648 | INFO     | . payload execution = 14811 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,648 | INFO     | . stage-out = 3 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,648 | INFO     | . log creation = 1 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,648 | INFO     | ..............................
[2025-10-13 22:40:23] 2025-10-13 20:39:43,796 | INFO     | 
[2025-10-13 22:40:23] 2025-10-13 20:39:43,796 | INFO     | job summary report
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | --------------------------------------------------
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | PanDA job id: 6841511023
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | task id: 46676269
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | errors: (none)
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | pilot state: finished 
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | transexitcode: 0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | exeerrorcode: 0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | exeerrordiag: 
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | exitcode: 0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | exitmsg: OK
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | cpuconsumptiontime: 54788 s
[2025-10-13 22:40:23] 2025-10-13 20:39:43,797 | INFO     | nevents: 400
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | neventsw: 0
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | pid: 31388
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | pgrp: 31388
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | corecount: 8
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | event service: False
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | sizes: {0: 2348578, 1: 2348833, 12: 2348833, 23: 2348861, 34: 2348889, 44: 2348917, 55: 2349073, 66: 2349101, 77: 2349129, 87: 2349185, 98: 2349783, 14948: 2380170
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | --------------------------------------------------
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | 
[2025-10-13 22:40:23] 2025-10-13 20:39:43,798 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-13 22:40:23] 2025-10-13 20:39:44,301 | INFO     | time since job start (15236s) is within the limit (172800.0s)
[2025-10-13 22:40:23] 2025-10-13 20:39:44,308 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,309 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | job 6841511023 has completed (purged errors)
[2025-10-13 22:40:23] 2025-10-13 20:39:44,310 | INFO     | overall cleanup function is called
[2025-10-13 22:40:23] 2025-10-13 20:39:45,328 | INFO     | --- collectZombieJob: --- 10, [31388]
[2025-10-13 22:40:23] 2025-10-13 20:39:45,328 | INFO     | zombie collector waiting for pid 31388
[2025-10-13 22:40:23] 2025-10-13 20:39:45,329 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 22:40:23] 2025-10-13 20:39:45,329 | INFO     | collected zombie processes
[2025-10-13 22:40:23] 2025-10-13 20:39:45,329 | INFO     | will attempt to kill all subprocesses of pid=31388
[2025-10-13 22:40:23] 2025-10-13 20:39:45,551 | INFO     | PID=24881 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 22:40:23] 2025-10-13 20:39:45,552 | INFO     | .. there are 9 such processes running
[2025-10-13 22:40:23] 2025-10-13 20:39:45,582 | INFO     | process IDs to be killed: [31388] (in reverse order)
[2025-10-13 22:40:23] 2025-10-13 20:39:46,405 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 22:40:23] 2025-10-13 20:39:46,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 22:40:23] 2025-10-13 20:39:46,409 | INFO     | did not find any defunct processes belonging to 31388
[2025-10-13 22:40:23] 2025-10-13 20:39:46,412 | INFO     | did not find any defunct processes belonging to 31388
[2025-10-13 22:40:23] 2025-10-13 20:39:46,419 | INFO     | ready for new job
[2025-10-13 22:40:23] 2025-10-13 20:39:46,420 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 22:40:23] 2025-10-13 20:39:46,422 | INFO     | ***************************************
[2025-10-13 22:40:23] 2025-10-13 20:39:46,422 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 22:40:23] 2025-10-13 20:39:46,422 | INFO     | ***************************************
[2025-10-13 22:40:23] 2025-10-13 20:39:46,422 | INFO     | 
[2025-10-13 22:40:23] 2025-10-13 20:39:46,423 | INFO     | pilot is running in a VM
[2025-10-13 22:40:23] 2025-10-13 20:39:46,423 | INFO     | architecture information:
[2025-10-13 22:40:23] 2025-10-13 20:39:46,431 | INFO     | executing command: cat /etc/os-release
[2025-10-13 22:40:23] 2025-10-13 20:39:46,664 | INFO     | cat /etc/os-release:
[2025-10-13 22:40:23] NAME="CentOS Linux"
[2025-10-13 22:40:23] VERSION="7 (Core)"
[2025-10-13 22:40:23] ID="centos"
[2025-10-13 22:40:23] ID_LIKE="rhel fedora"
[2025-10-13 22:40:23] VERSION_ID="7"
[2025-10-13 22:40:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 22:40:23] ANSI_COLOR="0;31"
[2025-10-13 22:40:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 22:40:23] HOME_URL="https://www.centos.org/"
[2025-10-13 22:40:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 22:40:23] 
[2025-10-13 22:40:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 22:40:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 22:40:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 22:40:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 22:40:23] 
[2025-10-13 22:40:23] 2025-10-13 20:39:46,664 | INFO     | ***************************************
[2025-10-13 22:40:23] 2025-10-13 20:39:47,167 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-13 22:40:23] 2025-10-13 20:39:47,275 | INFO     | sufficient remaining disk space (496531144704 B)
[2025-10-13 22:40:23] 2025-10-13 20:39:47,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 22:40:23] 2025-10-13 20:39:47,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 22:40:23] 2025-10-13 20:39:47,275 | INFO     | update_server=False
[2025-10-13 22:40:23] 2025-10-13 20:39:47,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 22:40:23] 2025-10-13 20:39:47,276 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:40:23] 2025-10-13 20:39:47,282 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 22:40:23] 2025-10-13 20:39:47,282 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 22:40:23] 2025-10-13 20:39:47,283 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:40:23] 2025-10-13 20:39:47,283 | INFO     | will abort loop
[2025-10-13 22:40:23] 2025-10-13 20:39:47,883 | INFO     | all payload control threads have been joined
[2025-10-13 22:40:23] 2025-10-13 20:39:48,280 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:48,288 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:48,338 | INFO     | all data control threads have been joined
[2025-10-13 22:40:23] 2025-10-13 20:39:48,601 | INFO     | all job control threads have been joined
[2025-10-13 22:40:23] 2025-10-13 20:39:48,804 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:40:23] 2025-10-13 20:39:48,889 | INFO     | [payload] control thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,075 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,111 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,206 | INFO     | [job] validate thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,283 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,344 | INFO     | [data] control thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,471 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,508 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,610 | INFO     | [job] control thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,626 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,659 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:49,680 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:40:23] 2025-10-13 20:39:49,813 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:53,689 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:39:57,658 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:40:23] 2025-10-13 20:39:58,664 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:40:23] 2025-10-13 20:40:13,707 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:40:23] 2025-10-13 20:40:14,303 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847707264832)>', '<ExcThread(monitor, started 139847247308544)>']
[2025-10-13 22:40:23] 2025-10-13 20:40:17,738 | INFO     | PID=24881 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 22:40:23] 2025-10-13 20:40:17,738 | INFO     | .. there are 9 such processes running
[2025-10-13 22:40:23] 2025-10-13 20:40:17,738 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:40:23] 2025-10-13 20:40:17,739 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:40:23] 2025-10-13 20:40:17,739 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:40:23] 2025-10-13 20:40:17,739 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:40:23] 2025-10-13 20:40:17,739 | INFO     | [monitor] control thread has ended
[2025-10-13 22:40:23] 2025-10-13 20:40:19,328 | INFO     | all workflow threads have been joined
[2025-10-13 22:40:23] 2025-10-13 20:40:19,328 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:40:23] 2025-10-13 20:40:19,329 | INFO     | traces error code: 0
[2025-10-13 22:40:23] 2025-10-13 20:40:19,329 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:40:23] 2025-10-13 20:40:19,555 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:40:23] 2025-10-13 20:40:19,565 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:40:23] 2025-10-13 20:40:19,574 [wrapper] pilotpid: 24881
[2025-10-13 22:40:23] 2025-10-13 20:40:19,584 [wrapper] Pilot exit status: 0
[2025-10-13 22:40:23] 2025-10-13 20:40:19,949 [wrapper] pandaids: 6841511023
[2025-10-13 22:40:23] 2025-10-13 20:40:20,889 [wrapper] cleanup supervisor_pilot  8611 24882
[2025-10-13 22:40:23] 2025-10-13 20:40:20,973 [wrapper] Test setup, not cleaning
[2025-10-13 22:40:23] 2025-10-13 20:40:21,032 [wrapper] apfmon messages muted
[2025-10-13 22:40:23] 2025-10-13 20:40:21,077 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:40:23] 2025-10-13 20:40:21,126 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:40:23]  *** Error codes and diagnostics ***
[2025-10-13 22:40:23]     "exeErrorCode": 0,
[2025-10-13 22:40:23]     "exeErrorDiag": "",
[2025-10-13 22:40:23]     "pilotErrorCode": 0,
[2025-10-13 22:40:23]     "pilotErrorDiag": "",
[2025-10-13 22:40:23]  *** Listing of results directory ***
[2025-10-13 22:40:23] total 415296
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 22:40:23] -rwx------. 1 boinc boinc     36292 Oct 13 04:47 runpilot2-wrapper.sh
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc      5112 Oct 13 04:47 queuedata.json
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc       100 Oct 13 18:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:40:23] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 18:22 run_atlas
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc       105 Oct 13 18:22 job.xml
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc 221137301 Oct 13 18:22 EVNT.46676267._000800.pool.root.1
[2025-10-13 22:40:23] drwxrwx--x. 2 boinc boinc        68 Oct 13 18:22 shared
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:22 input.tar.gz
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc      6388 Oct 13 18:22 init_data.xml
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:22 start_atlas.sh
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc         0 Oct 13 18:22 boinc_lockfile
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc      2549 Oct 13 18:22 pandaJob.out
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc    972783 Oct 13 18:25 agis_schedconf.cvmfs.json
[2025-10-13 22:40:23] drwx------. 5 boinc boinc      4096 Oct 13 18:25 pilot3
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc 195222045 Oct 13 22:36 HITS.46676269._095247.pool.root.1
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc       531 Oct 13 22:37 boinc_task_state.xml
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc      1017 Oct 13 22:37 memory_monitor_summary.json
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc   1560580 Oct 13 22:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc    468864 Oct 13 22:38 log.46676269._095247.job.log.tgz.1
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc      7778 Oct 13 22:39 heartbeat.json
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc        95 Oct 13 22:39 pilot_heartbeat.json
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc      8192 Oct 13 22:40 boinc_mmap_file
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc        28 Oct 13 22:40 wrapper_checkpoint.txt
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc      5142 Oct 13 22:40 pilotlog.txt
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc   2038194 Oct 13 22:40 log.46676269._095247.job.log.1
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc       357 Oct 13 22:40 output.list
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc       620 Oct 13 22:40 runtime_log
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc   2529280 Oct 13 22:40 result.tar.gz
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc      8703 Oct 13 22:40 runtime_log.err
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc       656 Oct 13 22:40 f6PLDmklNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmTaVMDmT3nHam.diag
[2025-10-13 22:40:23] -rw-r--r--. 1 boinc boinc     20812 Oct 13 22:40 stderr.txt
[2025-10-13 22:40:23] HITS file was successfully produced:
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc 195222045 Oct 13 22:36 shared/HITS.pool.root.1
[2025-10-13 22:40:23]  *** Contents of shared directory: ***
[2025-10-13 22:40:23] total 409652
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc 221137301 Oct 13 18:22 ATLAS.root_0
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc    569681 Oct 13 18:22 input.tar.gz
[2025-10-13 22:40:23] -rw-r--r--. 2 boinc boinc     15120 Oct 13 18:22 start_atlas.sh
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc 195222045 Oct 13 22:36 HITS.pool.root.1
[2025-10-13 22:40:23] -rw-------. 1 boinc boinc   2529280 Oct 13 22:40 result.tar.gz
22:40:25 (21075): run_atlas exited; CPU time 54996.162603
22:40:25 (21075): called boinc_finish(0)

</stderr_txt>
]]>

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