Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
21:01:13 (3361842): wrapper (7.7.26015): starting
21:01:13 (3361842): wrapper: running run_atlas (--nthreads 4)
[2025-10-13 21:01:13] Arguments: --nthreads 4
[2025-10-13 21:01:13] Threads: 4
[2025-10-13 21:01:13] Checking for CVMFS
[2025-10-13 21:01:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 21:01:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 21:01:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 21:01:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 21:01:13] 2.13.1.0 3088660 395 51980 151670 1 188 2928195 4096000 922 130560 0 823676 99.996 13522 1860 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 21:01:13] CVMFS is ok
[2025-10-13 21:01:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 21:01:13] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 21:01:13] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 21:01:13] Further information can be found at the LHC@home message board.
[2025-10-13 21:01:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 21:01:13] Checking for apptainer binary...
[2025-10-13 21:01:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 21:01:13] Running /usr/bin/apptainer --version
[2025-10-13 21:01:13] apptainer version 1.2.3
[2025-10-13 21:01:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 21:01:13] Ryzen-7-7700-Zen4-Deb12
[2025-10-13 21:01:13] apptainer works
[2025-10-13 21:01:13] Set ATHENA_PROC_NUMBER=4
[2025-10-13 21:01:13] Set ATHENA_CORE_NUMBER=4
[2025-10-13 21:01:13] Starting ATLAS job with PandaID=6841486521
[2025-10-13 21:01:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 22:14:31]  *** The last 200 lines of the pilot log: ***
[2025-10-13 22:14:31]  protocol_id=None
[2025-10-13 22:14:31]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 22:14:31]  replicas=None
[2025-10-13 22:14:31]  scope=mc23_13p6TeV
[2025-10-13 22:14:31]  status=None
[2025-10-13 22:14:31]  status_code=0
[2025-10-13 22:14:31]  storage_token=
[2025-10-13 22:14:31]  surl=/var/lib/boinc-client/slots/2/PanDA_Pilot-6841486521/log.46676269._095213.job.log.tgz.1
[2025-10-13 22:14:31]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/18/log.46676269._095213.job.log.tgz.1
[2025-10-13 22:14:31]  workdir=None
[2025-10-13 22:14:31] ]
[2025-10-13 22:14:31] 2025-10-13 20:13:24,553 | INFO     | transferring file log.46676269._095213.job.log.tgz.1 from /var/lib/boinc-client/slots/2/PanDA_Pilot-6841486521/log.46676269._095213.job.log.tgz.1 to /var/lib/boinc
[2025-10-13 22:14:31] 2025-10-13 20:13:24,553 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6841486521/log.46676269._095213.job.log.tgz.1 /var/lib/boinc-client/slots/2/log.466762
[2025-10-13 22:14:31] 2025-10-13 20:13:24,586 | INFO     | adding to output.list: log.46676269._095213.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/c8/18/log.46676269._095213.job.log.tg
[2025-10-13 22:14:31] 2025-10-13 20:13:24,586 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 22:14:31] 2025-10-13 20:13:24,586 | INFO     | summary of transferred files:
[2025-10-13 22:14:31] 2025-10-13 20:13:24,586 | INFO     |  -- lfn=log.46676269._095213.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 22:14:31] 2025-10-13 20:13:24,586 | INFO     | stage-out finished correctly
[2025-10-13 22:14:31] 2025-10-13 20:13:25,025 | INFO     | time since job start (4326s) is within the limit (172800.0s)
[2025-10-13 22:14:31] 2025-10-13 20:13:25,135 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 22:14:31] 2025-10-13 20:13:25,156 | INFO     | monitor loop #333: job 0:6841486521 is in state 'finished'
[2025-10-13 22:14:31] 2025-10-13 20:13:25,168 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,029 | INFO     | time since job start (4328s) is within the limit (172800.0s)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,668 | INFO     | monitor loop #334: job 0:6841486521 is in state 'finished'
[2025-10-13 22:14:31] 2025-10-13 20:13:27,669 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,836 | INFO     | job 6841486521 has state=finished
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | preparing for final server update for job 6841486521 in state='finished'
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | this job has now completed (state=finished)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | log transfer has been attempted: DONE
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | job 6841486521 has finished - writing final server update
[2025-10-13 22:14:31] 2025-10-13 20:13:27,837 | INFO     | total number of processed events: 400 (read)
[2025-10-13 22:14:31] 2025-10-13 20:13:27,841 | INFO     | executing command: lscpu
[2025-10-13 22:14:31] 2025-10-13 20:13:27,855 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 22:14:31] 2025-10-13 20:13:29,033 | INFO     | time since job start (4330s) is within the limit (172800.0s)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,573 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 22:14:31] 2025-10-13 20:13:29,574 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4967.449875000001
[2025-10-13 22:14:31] 2025-10-13 20:13:29,575 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6841486521/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,576 | INFO     | extracted standard info from prmon json
[2025-10-13 22:14:31] 2025-10-13 20:13:29,576 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 22:14:31] 2025-10-13 20:13:29,576 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 22:14:31] 2025-10-13 20:13:29,576 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 22:14:31] 2025-10-13 20:13:29,576 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | fitting pss+swap vs Time
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | sum of square deviations: 81266640.0
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | sum of deviations: -2495785567.5
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | mean x: 1760384323.5
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | mean y: 2377754.796875
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | -- intersect: 54065666059.13123
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | intersect: 54065666059.13123
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | chi2: 0.03202699549275166
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | -- intersect: 54065666059.13123
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | current memory leak: -30.71 B/s (using 64 data points, chi2=0.03)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | could have reported an average CPU frequency of 4910 MHz (6 samples)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | ..............................
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . Timing measurements:
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . get job = 0 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . initial setup = 1 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . payload setup = 2 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . stage-in = 0 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . payload execution = 4306 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . stage-out = 0 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | . log creation = 0 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,577 | INFO     | ..............................
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | 
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | job summary report
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | --------------------------------------------------
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | PanDA job id: 6841486521
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | task id: 46676269
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | errors: (none)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | pilot state: finished 
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | transexitcode: 0
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | exeerrorcode: 0
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | exeerrordiag: 
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | exitcode: 0
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | exitmsg: OK
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | cpuconsumptiontime: 16685 s
[2025-10-13 22:14:31] 2025-10-13 20:13:29,907 | INFO     | nevents: 400
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | neventsw: 0
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | pid: 3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | pgrp: 3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | corecount: 4
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | event service: False
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | sizes: {0: 2348814, 2: 2349076, 10: 2349104, 4312: 2384333, 4313: 2384333, 4317: 2384527}
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | --------------------------------------------------
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | 
[2025-10-13 22:14:31] 2025-10-13 20:13:29,908 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | job 6841486521 has completed (purged errors)
[2025-10-13 22:14:31] 2025-10-13 20:13:29,920 | INFO     | overall cleanup function is called
[2025-10-13 22:14:31] 2025-10-13 20:13:30,924 | INFO     | --- collectZombieJob: --- 10, [3374395]
[2025-10-13 22:14:31] 2025-10-13 20:13:30,925 | INFO     | zombie collector waiting for pid 3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:30,925 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 22:14:31] 2025-10-13 20:13:30,925 | INFO     | collected zombie processes
[2025-10-13 22:14:31] 2025-10-13 20:13:30,925 | INFO     | will attempt to kill all subprocesses of pid=3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:30,952 | INFO     | process IDs to be killed: [3374395] (in reverse order)
[2025-10-13 22:14:31] 2025-10-13 20:13:30,971 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 22:14:31] 2025-10-13 20:13:30,971 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 22:14:31] 2025-10-13 20:13:30,972 | INFO     | did not find any defunct processes belonging to 3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:30,973 | INFO     | did not find any defunct processes belonging to 3374395
[2025-10-13 22:14:31] 2025-10-13 20:13:30,973 | INFO     | ready for new job
[2025-10-13 22:14:31] 2025-10-13 20:13:30,973 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | ***************************************
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | ***************************************
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | 
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | architecture information:
[2025-10-13 22:14:31] 2025-10-13 20:13:30,974 | INFO     | executing command: cat /etc/os-release
[2025-10-13 22:14:31] 2025-10-13 20:13:30,982 | INFO     | cat /etc/os-release:
[2025-10-13 22:14:31] NAME="CentOS Linux"
[2025-10-13 22:14:31] VERSION="7 (Core)"
[2025-10-13 22:14:31] ID="centos"
[2025-10-13 22:14:31] ID_LIKE="rhel fedora"
[2025-10-13 22:14:31] VERSION_ID="7"
[2025-10-13 22:14:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 22:14:31] ANSI_COLOR="0;31"
[2025-10-13 22:14:31] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 22:14:31] HOME_URL="https://www.centos.org/"
[2025-10-13 22:14:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 22:14:31] 
[2025-10-13 22:14:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 22:14:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 22:14:31] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 22:14:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 22:14:31] 
[2025-10-13 22:14:31] 2025-10-13 20:13:30,982 | INFO     | ***************************************
[2025-10-13 22:14:31] 2025-10-13 20:13:31,484 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | INFO     | sufficient remaining disk space (884797865984 B)
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | INFO     | update_server=False
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 22:14:31] 2025-10-13 20:13:31,493 | INFO     | aborting loop
[2025-10-13 22:14:31] 2025-10-13 20:13:32,307 | INFO     | all job control threads have been joined
[2025-10-13 22:14:31] 2025-10-13 20:13:32,332 | INFO     | all payload control threads have been joined
[2025-10-13 22:14:31] 2025-10-13 20:13:32,496 | INFO     | [job] retrieve thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,497 | INFO     | [job] queue monitor thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,497 | INFO     | [job] job monitor thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,532 | INFO     | [job] validate thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,580 | INFO     | all data control threads have been joined
[2025-10-13 22:14:31] 2025-10-13 20:13:32,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 22:14:31] 2025-10-13 20:13:32,668 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,696 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,720 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:32,876 | INFO     | [data] copytool_in thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:33,256 | INFO     | [payload] validate_post thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:33,308 | INFO     | [job] control thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:33,336 | INFO     | [payload] control thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:33,576 | INFO     | [payload] failed_post thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:33,586 | INFO     | [data] control thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:34,639 | INFO     | [data] copytool_out thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:35,496 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:13:41,850 | INFO     | job.realtimelogging is not enabled
[2025-10-13 22:14:31] 2025-10-13 20:13:42,856 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 22:14:31] 2025-10-13 20:14:02,099 | INFO     | PID=3365919 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 22:14:31] 2025-10-13 20:14:02,099 | INFO     | .. there are 2 such processes running
[2025-10-13 22:14:31] 2025-10-13 20:14:02,123 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 22:14:31] 2025-10-13 20:14:02,123 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 22:14:31] 2025-10-13 20:14:02,123 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 22:14:31] 2025-10-13 20:14:26,432 | INFO     | [monitor] cgroup control has ended
[2025-10-13 22:14:31] 2025-10-13 20:14:26,740 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140016152139584)>', '<ExcThread(monitor, started 140015061432064)>']
[2025-10-13 22:14:31] 2025-10-13 20:14:27,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 22:14:31] 2025-10-13 20:14:27,221 | INFO     | [monitor] control thread has ended
[2025-10-13 22:14:31] 2025-10-13 20:14:31,766 | INFO     | all workflow threads have been joined
[2025-10-13 22:14:31] 2025-10-13 20:14:31,766 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 22:14:31] 2025-10-13 20:14:31,766 | INFO     | traces error code: 0
[2025-10-13 22:14:31] 2025-10-13 20:14:31,766 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 22:14:31] 2025-10-13 20:14:31,821 [wrapper] ==== pilot stdout END ====
[2025-10-13 22:14:31] 2025-10-13 20:14:31,822 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 22:14:31] 2025-10-13 20:14:31,823 [wrapper] pilotpid: 3365919
[2025-10-13 22:14:31] 2025-10-13 20:14:31,824 [wrapper] Pilot exit status: 0
[2025-10-13 22:14:31] 2025-10-13 20:14:31,831 [wrapper] pandaids: 6841486521
[2025-10-13 22:14:31] 2025-10-13 20:14:31,842 [wrapper] cleanup supervisor_pilot 3407264 3365920
[2025-10-13 22:14:31] 2025-10-13 20:14:31,843 [wrapper] Test setup, not cleaning
[2025-10-13 22:14:31] 2025-10-13 20:14:31,844 [wrapper] apfmon messages muted
[2025-10-13 22:14:31] 2025-10-13 20:14:31,845 [wrapper] ==== wrapper stdout END ====
[2025-10-13 22:14:31] 2025-10-13 20:14:31,846 [wrapper] ==== wrapper stderr END ====
[2025-10-13 22:14:31]  *** Error codes and diagnostics ***
[2025-10-13 22:14:31]     "exeErrorCode": 0,
[2025-10-13 22:14:31]     "exeErrorDiag": "",
[2025-10-13 22:14:31]     "pilotErrorCode": 0,
[2025-10-13 22:14:31]     "pilotErrorDiag": "",
[2025-10-13 22:14:31]  *** Listing of results directory ***
[2025-10-13 22:14:31] total 412504
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:45 queuedata.json
[2025-10-13 22:14:31] -rwx------ 1 boinc boinc     36292 Oct 13 04:45 runpilot2-wrapper.sh
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc       100 Oct 13 21:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 22:14:31] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 21:01 run_atlas
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc       105 Oct 13 21:01 job.xml
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc 223232836 Oct 13 21:01 EVNT.46676267._002238.pool.root.1
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:01 start_atlas.sh
[2025-10-13 22:14:31] drwxrwx--x 2 boinc boinc      4096 Oct 13 21:01 shared
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc    569687 Oct 13 21:01 input.tar.gz
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc      6737 Oct 13 21:01 init_data.xml
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc         0 Oct 13 21:01 boinc_lockfile
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc      2550 Oct 13 21:01 pandaJob.out
[2025-10-13 22:14:31] -rw------- 1 boinc boinc    972799 Oct 13 21:01 agis_schedconf.cvmfs.json
[2025-10-13 22:14:31] -rw------- 1 boinc boinc   1560580 Oct 13 21:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 22:14:31] drwx------ 5 boinc boinc      4096 Oct 13 21:01 pilot3
[2025-10-13 22:14:31] -rw------- 1 boinc boinc 193401615 Oct 13 22:13 HITS.46676269._095213.pool.root.1
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc       529 Oct 13 22:13 boinc_task_state.xml
[2025-10-13 22:14:31] -rw------- 1 boinc boinc      1013 Oct 13 22:13 memory_monitor_summary.json
[2025-10-13 22:14:31] -rw------- 1 boinc boinc    269670 Oct 13 22:13 log.46676269._095213.job.log.tgz.1
[2025-10-13 22:14:31] -rw------- 1 boinc boinc      7748 Oct 13 22:13 heartbeat.json
[2025-10-13 22:14:31] -rw------- 1 boinc boinc        95 Oct 13 22:14 pilot_heartbeat.json
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc        27 Oct 13 22:14 wrapper_checkpoint.txt
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc      8192 Oct 13 22:14 boinc_mmap_file
[2025-10-13 22:14:31] -rw------- 1 boinc boinc      4903 Oct 13 22:14 pilotlog.txt
[2025-10-13 22:14:31] -rw------- 1 boinc boinc    662369 Oct 13 22:14 log.46676269._095213.job.log.1
[2025-10-13 22:14:31] -rw------- 1 boinc boinc       357 Oct 13 22:14 output.list
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc       620 Oct 13 22:14 runtime_log
[2025-10-13 22:14:31] -rw------- 1 boinc boinc    952320 Oct 13 22:14 result.tar.gz
[2025-10-13 22:14:31] -rw------- 1 boinc boinc       655 Oct 13 22:14 UYiLDmIkNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwZVMDm0xplQo.diag
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc      8826 Oct 13 22:14 runtime_log.err
[2025-10-13 22:14:31] -rw-r--r-- 1 boinc boinc     21822 Oct 13 22:14 stderr.txt
[2025-10-13 22:14:31] HITS file was successfully produced:
[2025-10-13 22:14:31] -rw------- 1 boinc boinc 193401615 Oct 13 22:13 shared/HITS.pool.root.1
[2025-10-13 22:14:31]  *** Contents of shared directory: ***
[2025-10-13 22:14:31] total 408392
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc 223232836 Oct 13 21:01 ATLAS.root_0
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc     15120 Oct 13 21:01 start_atlas.sh
[2025-10-13 22:14:31] -rw-r--r-- 2 boinc boinc    569687 Oct 13 21:01 input.tar.gz
[2025-10-13 22:14:31] -rw------- 1 boinc boinc 193401615 Oct 13 22:13 HITS.pool.root.1
[2025-10-13 22:14:31] -rw------- 1 boinc boinc    952320 Oct 13 22:14 result.tar.gz
22:14:33 (3361842): run_atlas exited; CPU time 16697.508124
22:14:33 (3361842): called boinc_finish(0)

</stderr_txt>
]]>

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