Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:31:47 (1239007): wrapper (7.7.26015): starting
04:31:47 (1239007): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:31:47] Arguments: --nthreads 8
[2025-10-13 04:31:47] Threads: 8
[2025-10-13 04:31:47] Checking for CVMFS
[2025-10-13 04:31:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:31:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:31:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:31:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:31:49] 2.13.2.0 704839 126206 133648 151654 1 292 24524702 40960000 27703 16776704 1 302650787 99.701 235965907 35584 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 04:31:49] CVMFS is ok
[2025-10-13 04:31:49] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:31:49] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:31:49] Further information can be found at the LHC@home message board.
[2025-10-13 04:31:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:31:49] Checking for apptainer binary...
[2025-10-13 04:31:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:31:49] Running /usr/bin/apptainer --version
[2025-10-13 04:31:49] apptainer version 1.4.3-1.el9
[2025-10-13 04:31:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:31:50] c-212-4.aglt2.org
[2025-10-13 04:31:50] apptainer works
[2025-10-13 04:31:50] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:31:50] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:31:50] Starting ATLAS job with PandaID=6841503280
[2025-10-13 04:31:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:00:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:00:32] 2025-10-13 11:59:58,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,928 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 08:00:32] 2025-10-13 11:59:58,945 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3074.5720937500005
[2025-10-13 08:00:32] 2025-10-13 11:59:58,970 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841503280/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,971 | INFO     | extracted standard info from prmon json
[2025-10-13 08:00:32] 2025-10-13 11:59:58,971 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:00:32] 2025-10-13 11:59:58,971 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:00:32] 2025-10-13 11:59:58,971 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:00:32] 2025-10-13 11:59:58,971 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:00:32] 2025-10-13 11:59:58,974 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:00:32] 2025-10-13 11:59:58,974 | INFO     | sum of square deviations: 2555673793.663376
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | sum of deviations: -11063777290.643566
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | mean x: 1760350589.5643563
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | mean y: 2532819.5495049506
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | -- intersect: 7623273355.639403
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | intersect: 7623273355.639403
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | chi2: 2.795663308605014
[2025-10-13 08:00:32] 2025-10-13 11:59:58,975 | INFO     | sum of square deviations: 2370548706.142139
[2025-10-13 08:00:32] 2025-10-13 11:59:58,976 | INFO     | sum of deviations: -10612204891.852808
[2025-10-13 08:00:32] 2025-10-13 11:59:58,976 | INFO     | mean x: 1760350437.0659897
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | mean y: 2533191.604060914
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | -- intersect: 7883071343.468887
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | intersect: 7883071343.468887
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | chi2: 2.794367561990889
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | current chi2=2.794367561990889 (change=0.046348450120467816 %)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | right removable region: 196
[2025-10-13 08:00:32] 2025-10-13 11:59:58,977 | INFO     | sum of square deviations: 2370540776.142139
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | sum of deviations: -54902284559.56351
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | mean x: 1760350742.0659897
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | mean y: 2568622.274111675
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | -- intersect: 40772707798.209854
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | intersect: 40772707798.209854
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | chi2: 0.3812540056435834
[2025-10-13 08:00:32] 2025-10-13 11:59:58,978 | INFO     | current chi2=0.3812540056435834 (change=86.3626637560364 %)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,979 | INFO     | sum of square deviations: 2194570721.119782
[2025-10-13 08:00:32] 2025-10-13 11:59:58,979 | INFO     | sum of deviations: -50869037476.89064
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | mean x: 1760350894.5677083
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | mean y: 2565078.953125
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | -- intersect: 40806606965.81065
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | intersect: 40806606965.81065
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | chi2: 0.36890005433275347
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | current chi2=0.36890005433275347 (change=3.240346626647401 %)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | left removable region: 20
[2025-10-13 08:00:32] 2025-10-13 11:59:58,980 | INFO     | sum of square deviations: 1690387783.5397813
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | sum of deviations: -31297906903.153427
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | mean x: 1760351016.5511363
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | mean y: 2548631.5170454546
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | -- intersect: 32595840401.240932
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | intersect: 32595840401.240932
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | chi2: 0.3062750211143919
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | -- intersect: 32595840401.240932
[2025-10-13 08:00:32] 2025-10-13 11:59:58,981 | INFO     | current memory leak: -18.52 B/s (using 176 data points, chi2=0.31)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | could have reported an average CPU frequency of 3027 MHz (10 samples)
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | ..............................
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . Timing measurements:
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . get job = 0 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . initial setup = 4 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . payload setup = 29 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . stage-in = 0 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . payload execution = 12344 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . stage-out = 2 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | . log creation = 0 s
[2025-10-13 08:00:32] 2025-10-13 11:59:58,982 | INFO     | ..............................
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | job summary report
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | --------------------------------------------------
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | PanDA job id: 6841503280
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | task id: 46676269
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | errors: (none)
[2025-10-13 08:00:32] 2025-10-13 11:59:59,094 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | pilot state: finished 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | transexitcode: 0
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | exeerrorcode: 0
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | exeerrordiag: 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | exitcode: 0
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | exitmsg: OK
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | cpuconsumptiontime: 41175 s
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | nevents: 400
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | neventsw: 0
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | pid: 1251347
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | pgrp: 1251347
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | corecount: 8
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | event service: False
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | sizes: {0: 2347979, 1: 2348664, 2: 2348863, 13: 2348863, 19: 2349181, 24: 2349209, 12378: 2379266, 12382: 2388264, 12383: 2388320, 12393: 2388514}
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | --------------------------------------------------
[2025-10-13 08:00:32] 2025-10-13 11:59:59,095 | INFO     | 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,096 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:00:32] 2025-10-13 11:59:59,154 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,157 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,198 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | job 6841503280 has completed (purged errors)
[2025-10-13 08:00:32] 2025-10-13 11:59:59,199 | INFO     | overall cleanup function is called
[2025-10-13 08:00:32] 2025-10-13 11:59:59,664 | INFO     | PID=1244043 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 08:00:32] 2025-10-13 11:59:59,664 | INFO     | .. there are 22 such processes running
[2025-10-13 08:00:32] 2025-10-13 12:00:00,229 | INFO     | --- collectZombieJob: --- 10, [1251347]
[2025-10-13 08:00:32] 2025-10-13 12:00:00,229 | INFO     | zombie collector waiting for pid 1251347
[2025-10-13 08:00:32] 2025-10-13 12:00:00,229 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:00:32] 2025-10-13 12:00:00,229 | INFO     | collected zombie processes
[2025-10-13 08:00:32] 2025-10-13 12:00:00,229 | INFO     | will attempt to kill all subprocesses of pid=1251347
[2025-10-13 08:00:32] 2025-10-13 12:00:00,727 | INFO     | process IDs to be killed: [1251347] (in reverse order)
[2025-10-13 08:00:32] 2025-10-13 12:00:00,884 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:00:32] 2025-10-13 12:00:00,884 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:00:32] 2025-10-13 12:00:00,908 | INFO     | did not find any defunct processes belonging to 1251347
[2025-10-13 08:00:32] 2025-10-13 12:00:00,940 | INFO     | did not find any defunct processes belonging to 1251347
[2025-10-13 08:00:32] 2025-10-13 12:00:00,941 | INFO     | ready for new job
[2025-10-13 08:00:32] 2025-10-13 12:00:00,941 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:00:32] 2025-10-13 12:00:00,948 | INFO     | ***************************************
[2025-10-13 08:00:32] 2025-10-13 12:00:00,948 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:00:32] 2025-10-13 12:00:00,948 | INFO     | ***************************************
[2025-10-13 08:00:32] 2025-10-13 12:00:00,948 | INFO     | 
[2025-10-13 08:00:32] 2025-10-13 12:00:00,962 | INFO     | architecture information:
[2025-10-13 08:00:32] 2025-10-13 12:00:00,962 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:00:32] 2025-10-13 12:00:00,999 | INFO     | cat /etc/os-release:
[2025-10-13 08:00:32] NAME="CentOS Linux"
[2025-10-13 08:00:32] VERSION="7 (Core)"
[2025-10-13 08:00:32] ID="centos"
[2025-10-13 08:00:32] ID_LIKE="rhel fedora"
[2025-10-13 08:00:32] VERSION_ID="7"
[2025-10-13 08:00:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:00:32] ANSI_COLOR="0;31"
[2025-10-13 08:00:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:00:32] HOME_URL="https://www.centos.org/"
[2025-10-13 08:00:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:00:32] 
[2025-10-13 08:00:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:00:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:00:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:00:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:00:32] 
[2025-10-13 08:00:32] 2025-10-13 12:00:01,000 | INFO     | ***************************************
[2025-10-13 08:00:32] 2025-10-13 12:00:01,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:00:32] 2025-10-13 12:00:01,543 | INFO     | sufficient remaining disk space (127640010752 B)
[2025-10-13 08:00:32] 2025-10-13 12:00:01,543 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:00:32] 2025-10-13 12:00:01,544 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:00:32] 2025-10-13 12:00:01,544 | INFO     | update_server=False
[2025-10-13 08:00:32] 2025-10-13 12:00:01,544 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:00:32] 2025-10-13 12:00:01,548 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:00:32] 2025-10-13 12:00:01,594 | INFO     | all job control threads have been joined
[2025-10-13 08:00:32] 2025-10-13 12:00:02,138 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:00:32] 2025-10-13 12:00:02,138 | INFO     | aborting loop
[2025-10-13 08:00:32] 2025-10-13 12:00:02,188 | INFO     | all payload control threads have been joined
[2025-10-13 08:00:32] 2025-10-13 12:00:02,253 | INFO     | all data control threads have been joined
[2025-10-13 08:00:32] 2025-10-13 12:00:02,550 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:02,600 | INFO     | [job] control thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:02,826 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:02,919 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,145 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,194 | INFO     | [payload] control thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,260 | INFO     | [data] control thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,344 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,401 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,424 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,554 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,650 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:00:32] 2025-10-13 12:00:03,716 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,928 | INFO     | [job] validate thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:03,942 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:04,132 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:00:32] 2025-10-13 12:00:05,140 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:05,880 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:00:32] 2025-10-13 12:00:07,664 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:00:32] 2025-10-13 12:00:08,816 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438667024192)>', '<ExcThread(monitor, started 140438023423744)>']
[2025-10-13 08:00:32] 2025-10-13 12:00:13,842 | INFO     | all workflow threads have been joined
[2025-10-13 08:00:32] 2025-10-13 12:00:13,842 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:00:32] 2025-10-13 12:00:13,842 | INFO     | traces error code: 0
[2025-10-13 08:00:32] 2025-10-13 12:00:13,843 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:00:32] 2025-10-13 12:00:32,258 | INFO     | PID=1244043 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 08:00:32] 2025-10-13 12:00:32,258 | INFO     | .. there are 22 such processes running
[2025-10-13 08:00:32] 2025-10-13 12:00:32,259 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:00:32] 2025-10-13 12:00:32,259 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:00:32] 2025-10-13 12:00:32,259 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:00:32] 2025-10-13 12:00:32,260 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:00:32] 2025-10-13 12:00:32,260 | INFO     | [monitor] control thread has ended
[2025-10-13 08:00:32] 2025-10-13 12:00:32,477 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:00:32] 2025-10-13 12:00:32,481 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:00:32] 2025-10-13 12:00:32,484 [wrapper] pilotpid: 1244043
[2025-10-13 08:00:32] 2025-10-13 12:00:32,487 [wrapper] Pilot exit status: 0
[2025-10-13 08:00:32] 2025-10-13 12:00:32,547 [wrapper] pandaids: 6841503280
[2025-10-13 08:00:32] 2025-10-13 12:00:32,662 [wrapper] cleanup supervisor_pilot 1806497 1244044
[2025-10-13 08:00:32] 2025-10-13 12:00:32,674 [wrapper] Test setup, not cleaning
[2025-10-13 08:00:32] 2025-10-13 12:00:32,682 [wrapper] apfmon messages muted
[2025-10-13 08:00:32] 2025-10-13 12:00:32,686 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:00:32] 2025-10-13 12:00:32,714 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:00:32]  *** Error codes and diagnostics ***
[2025-10-13 08:00:32]     "exeErrorCode": 0,
[2025-10-13 08:00:32]     "exeErrorDiag": "",
[2025-10-13 08:00:32]     "pilotErrorCode": 0,
[2025-10-13 08:00:32]     "pilotErrorDiag": "",
[2025-10-13 08:00:32]  *** Listing of results directory ***
[2025-10-13 08:00:32] total 422696
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:45 queuedata.json
[2025-10-13 08:00:32] -rwx------. 1 boincer umatlas     36292 Oct 12 22:45 runpilot2-wrapper.sh
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:00:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:31 run_atlas
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:31 job.xml
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas 220537441 Oct 13 04:31 EVNT.46676267._001925.pool.root.1
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 04:31 input.tar.gz
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:31 start_atlas.sh
[2025-10-13 08:00:32] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:31 shared
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:31 boinc_lockfile
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 04:31 pandaJob.out
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas    972857 Oct 13 04:32 agis_schedconf.cvmfs.json
[2025-10-13 08:00:32] drwx------. 5 boincer umatlas      4096 Oct 13 04:32 pilot3
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas      6947 Oct 13 07:56 init_data.xml
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas 204245750 Oct 13 07:59 HITS.46676269._095232.pool.root.1
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas       531 Oct 13 07:59 boinc_task_state.xml
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas      1045 Oct 13 07:59 memory_monitor_summary.json
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas   1560580 Oct 13 07:59 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas    435348 Oct 13 07:59 log.46676269._095232.job.log.tgz.1
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas      7805 Oct 13 07:59 heartbeat.json
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:00 boinc_mmap_file
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:00 wrapper_checkpoint.txt
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas        95 Oct 13 08:00 pilot_heartbeat.json
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas       823 Oct 13 08:00 pilotlog.txt
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas   1639974 Oct 13 08:00 log.46676269._095232.job.log.1
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas       357 Oct 13 08:00 output.list
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:00 runtime_log
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas   2099200 Oct 13 08:00 result.tar.gz
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas       660 Oct 13 08:00 ZnDMDmIkNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmFaVMDmWt2kun.diag
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas      8699 Oct 13 08:00 runtime_log.err
[2025-10-13 08:00:32] -rw-r--r--. 1 boincer umatlas     21318 Oct 13 08:00 stderr.txt
[2025-10-13 08:00:32] HITS file was successfully produced:
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas 204245750 Oct 13 07:59 shared/HITS.pool.root.1
[2025-10-13 08:00:32]  *** Contents of shared directory: ***
[2025-10-13 08:00:32] total 417468
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas 220537441 Oct 13 04:31 ATLAS.root_0
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 04:31 input.tar.gz
[2025-10-13 08:00:32] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:31 start_atlas.sh
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas 204245750 Oct 13 07:59 HITS.pool.root.1
[2025-10-13 08:00:32] -rw-------. 1 boincer umatlas   2099200 Oct 13 08:00 result.tar.gz
08:00:34 (1239007): run_atlas exited; CPU time 41552.713762
08:00:34 (1239007): called boinc_finish(0)

</stderr_txt>
]]>

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