Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
19:45:07 (3314115): wrapper (7.7.26015): starting
19:45:07 (3314115): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 19:45:07] Arguments: --nthreads 3
[2025-10-13 19:45:07] Threads: 3
[2025-10-13 19:45:07] Checking for CVMFS
[2025-10-13 19:45:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 19:45:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 19:45:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 19:45:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 19:45:07] 2.9.2.0 1511920 6047 84864 151668 1 57 29367067 36864000 0 130560 0 4733653 99.991 204270 827 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 19:45:07] CVMFS is ok
[2025-10-13 19:45:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 19:45:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 19:45:07] Further information can be found at the LHC@home message board.
[2025-10-13 19:45:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 19:45:07] Checking for apptainer binary...
[2025-10-13 19:45:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 19:45:07] Running /usr/bin/apptainer --version
[2025-10-13 19:45:07] apptainer version 1.4.1-1.1
[2025-10-13 19:45:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 19:45:07] thA327
[2025-10-13 19:45:07] apptainer works
[2025-10-13 19:45:07] Set ATHENA_PROC_NUMBER=3
[2025-10-13 19:45:07] Set ATHENA_CORE_NUMBER=3
[2025-10-13 19:45:07] Starting ATLAS job with PandaID=6841068839
[2025-10-13 19:45:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:09:25]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:09:25] 2025-10-13 19:08:26,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:09:25] 2025-10-13 19:08:26,496 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:09:25] 2025-10-13 19:08:26,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:09:25] 2025-10-13 19:08:26,579 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:09:25] 2025-10-13 19:08:26,579 | INFO     | aborting loop
[2025-10-13 21:09:25] 2025-10-13 19:08:26,669 | INFO     | all job control threads have been joined
[2025-10-13 21:09:25] 2025-10-13 19:08:26,698 | INFO     | all data control threads have been joined
[2025-10-13 21:09:25] 2025-10-13 19:08:26,935 | INFO     | all payload control threads have been joined
[2025-10-13 21:09:25] 2025-10-13 19:08:27,501 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,502 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,563 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,584 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,675 | INFO     | [job] control thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,704 | INFO     | [data] control thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:27,941 | INFO     | [payload] control thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,002 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,402 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,502 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,866 | INFO     | [job] validate thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,876 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:28,993 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:29,050 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:30,503 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:36,792 | INFO     | job.realtimelogging is not enabled
[2025-10-13 21:09:25] 2025-10-13 19:08:37,798 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:09:25] 2025-10-13 19:08:56,871 | INFO     | PID=3317834 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 21:09:25] 2025-10-13 19:08:56,871 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:09:25] 2025-10-13 19:08:56,871 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:09:25] 2025-10-13 19:08:56,871 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:09:25] 2025-10-13 19:09:18,231 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:09:25] 2025-10-13 19:09:19,899 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140088081692480)>', '<ExcThread(monitor, started 140087597721344)>']
[2025-10-13 21:09:25] 2025-10-13 19:09:19,986 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:09:25] 2025-10-13 19:09:19,986 | INFO     | [monitor] control thread has ended
[2025-10-13 21:09:25] 2025-10-13 19:09:24,923 | INFO     | all workflow threads have been joined
[2025-10-13 21:09:25] 2025-10-13 19:09:24,923 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:09:25] 2025-10-13 19:09:24,923 | INFO     | traces error code: 0
[2025-10-13 21:09:25] 2025-10-13 19:09:24,923 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:09:25] 2025-10-13 19:09:24,972 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:09:25] 2025-10-13 19:09:24,975 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:09:25] 2025-10-13 19:09:24,977 [wrapper] pilotpid: 3317834
[2025-10-13 21:09:25] 2025-10-13 19:09:24,980 [wrapper] Pilot exit status: 0
[2025-10-13 21:09:25] 2025-10-13 19:09:24,987 [wrapper] pandaids: 6841068839
[2025-10-13 21:09:25] 2025-10-13 19:09:25,005 [wrapper] cleanup supervisor_pilot 3336262 3317835
[2025-10-13 21:09:25] 2025-10-13 19:09:25,007 [wrapper] Test setup, not cleaning
[2025-10-13 21:09:25] 2025-10-13 19:09:25,009 [wrapper] apfmon messages muted
[2025-10-13 21:09:25] 2025-10-13 19:09:25,012 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:09:25] 2025-10-13 19:09:25,014 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:09:25]  *** Error codes and diagnostics ***
[2025-10-13 21:09:25]     "exeErrorCode": 0,
[2025-10-13 21:09:25]     "exeErrorDiag": "",
[2025-10-13 21:09:25]     "pilotErrorCode": 0,
[2025-10-13 21:09:25]     "pilotErrorDiag": "",
[2025-10-13 21:09:25]  *** Listing of results directory ***
[2025-10-13 21:09:25] total 409464
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:11 pilot3.tar.gz
[2025-10-13 21:09:25] -rwx------ 1 boinc boinc     36292 Oct 13 02:21 runpilot2-wrapper.sh
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:21 queuedata.json
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc       100 Oct 13 19:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:09:25] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 19:45 run_atlas
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc       105 Oct 13 19:45 job.xml
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc 218217752 Oct 13 19:45 EVNT.46676267._004689.pool.root.1
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc    569676 Oct 13 19:45 input.tar.gz
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:45 start_atlas.sh
[2025-10-13 21:09:25] drwxrwx--x 2 boinc boinc      4096 Oct 13 19:45 shared
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:45 boinc_setup_complete
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      6446 Oct 13 19:45 init_data.xml
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc         0 Oct 13 19:45 boinc_lockfile
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      2550 Oct 13 19:45 pandaJob.out
[2025-10-13 21:09:25] -rw------- 1 boinc boinc    972791 Oct 13 19:45 agis_schedconf.cvmfs.json
[2025-10-13 21:09:25] -rw------- 1 boinc boinc   1560580 Oct 13 19:45 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:09:25] drwx------ 5 boinc boinc      4096 Oct 13 19:45 pilot3
[2025-10-13 21:09:25] -rw------- 1 boinc boinc 195180453 Oct 13 21:07 HITS.46676269._093075.pool.root.1
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc       529 Oct 13 21:08 boinc_task_state.xml
[2025-10-13 21:09:25] -rw------- 1 boinc boinc      1014 Oct 13 21:08 memory_monitor_summary.json
[2025-10-13 21:09:25] -rw------- 1 boinc boinc    270768 Oct 13 21:08 log.46676269._093075.job.log.tgz.1
[2025-10-13 21:09:25] -rw------- 1 boinc boinc      7750 Oct 13 21:08 heartbeat.json
[2025-10-13 21:09:25] -rw------- 1 boinc boinc        95 Oct 13 21:08 pilot_heartbeat.json
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc        27 Oct 13 21:08 wrapper_checkpoint.txt
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      8192 Oct 13 21:08 boinc_mmap_file
[2025-10-13 21:09:25] -rw------- 1 boinc boinc      4824 Oct 13 21:09 pilotlog.txt
[2025-10-13 21:09:25] -rw------- 1 boinc boinc    732419 Oct 13 21:09 log.46676269._093075.job.log.1
[2025-10-13 21:09:25] -rw------- 1 boinc boinc       357 Oct 13 21:09 output.list
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc       620 Oct 13 21:09 runtime_log
[2025-10-13 21:09:25] -rw------- 1 boinc boinc   1024000 Oct 13 21:09 result.tar.gz
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      8777 Oct 13 21:09 runtime_log.err
[2025-10-13 21:09:25] -rw------- 1 boinc boinc       658 Oct 13 21:09 9VmNDmvULS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmANVMDm8oP7Wm.diag
[2025-10-13 21:09:25] -rw-r--r-- 1 boinc boinc      7288 Oct 13 21:09 stderr.txt
[2025-10-13 21:09:25] HITS file was successfully produced:
[2025-10-13 21:09:25] -rw------- 1 boinc boinc 195180453 Oct 13 21:07 shared/HITS.pool.root.1
[2025-10-13 21:09:25]  *** Contents of shared directory: ***
[2025-10-13 21:09:25] total 405296
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc 218217752 Oct 13 19:45 ATLAS.root_0
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc    569676 Oct 13 19:45 input.tar.gz
[2025-10-13 21:09:25] -rw-r--r-- 2 boinc boinc     15120 Oct 13 19:45 start_atlas.sh
[2025-10-13 21:09:25] -rw------- 1 boinc boinc 195180453 Oct 13 21:07 HITS.pool.root.1
[2025-10-13 21:09:25] -rw------- 1 boinc boinc   1024000 Oct 13 21:09 result.tar.gz
21:09:26 (3314115): run_atlas exited; CPU time 14362.767556
21:09:26 (3314115): called boinc_finish(0)

</stderr_txt>
]]>

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