Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-13 13:35:43 (1445043): vboxwrapper version 26210
2025-10-13 13:35:43 (1445043): BOINC client version: 8.2.5
2025-10-13 13:35:43 (1445043): Detected: VirtualBox VboxManage Interface (Version: 7.0.20)
2025-10-13 13:35:44 (1445043): Successfully copied 'init_data.xml' to the shared directory.
2025-10-13 13:35:44 (1445043): Create VM. (boinc_ea63dec629da7f6f, slot#6)
2025-10-13 13:35:44 (1445043): Setting Memory Size for VM. (4096MB)
2025-10-13 13:35:44 (1445043): Setting CPU Count for VM. (1)
2025-10-13 13:35:45 (1445043): Setting Chipset Options for VM.
2025-10-13 13:35:45 (1445043): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-13 13:35:45 (1445043): Setting Boot Options for VM.
2025-10-13 13:35:46 (1445043): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-13 13:35:46 (1445043): Enabling VM Network Access.
2025-10-13 13:35:46 (1445043): Disabling USB Support for VM.
2025-10-13 13:35:46 (1445043): Disabling COM Port Support for VM.
2025-10-13 13:35:47 (1445043): Disabling LPT Port Support for VM.
2025-10-13 13:35:47 (1445043): Disabling Audio Support for VM.
2025-10-13 13:35:47 (1445043): Disabling Clipboard Support for VM.
2025-10-13 13:35:47 (1445043): Disabling Drag and Drop Support for VM.
2025-10-13 13:35:48 (1445043): Adding storage controller(s) to VM.
2025-10-13 13:35:48 (1445043): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-13 13:35:48 (1445043): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-13 13:35:49 (1445043): forwarding host port 38443 to guest port 80
2025-10-13 13:35:49 (1445043): Enabling remote desktop for VM.
2025-10-13 13:35:49 (1445043): Enabling shared directory for VM.
2025-10-13 13:35:50 (1445043): Starting VM using VBoxManage interface. (boinc_ea63dec629da7f6f, slot#6)
2025-10-13 13:35:52 (1445043): Successfully started VM. (PID = '1445503')
2025-10-13 13:35:52 (1445043): Reporting VM Process ID to BOINC.
2025-10-13 13:35:52 (1445043): Guest Log: BIOS: VirtualBox 7.0.20
2025-10-13 13:35:52 (1445043): Guest Log: CPUID EDX: 0x178bfbff
2025-10-13 13:35:52 (1445043): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-13 13:35:52 (1445043): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-13 13:35:52 (1445043): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-13 13:35:52 (1445043): Detected: Web Application Enabled (http://localhost:38443)
2025-10-13 13:35:52 (1445043): Detected: Remote Desktop Enabled (localhost:53077)
2025-10-13 13:35:52 (1445043): Preference change detected
2025-10-13 13:35:52 (1445043): Setting CPU throttle for VM. (100%)
2025-10-13 13:35:52 (1445043): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-13 13:35:54 (1445043): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-13 13:35:54 (1445043): Guest Log: BIOS: Booting from Hard Disk...
2025-10-13 13:35:57 (1445043): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-13 13:35:57 (1445043): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-13 13:35:57 (1445043): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-13 13:36:01 (1445043): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-13 13:36:01 (1445043): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-13 13:36:12 (1445043): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000171 main     Log opened 2025-10-13T11:36:09.810826000Z
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000285 main     OS Product: Linux
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000312 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000340 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000359 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000360 main     Process ID: 1242
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.000361 main     Package type: LINUX_64BITS_GENERIC
2025-10-13 13:36:12 (1445043): Guest Log: 00:00:00.002116 main     5.2.32 r132073 started. Verbose level = 0
2025-10-13 13:36:12 (1445043): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-13 13:36:12 (1445043): Guest Log: [INFO] Mounting shared directory
2025-10-13 13:36:12 (1445043): Guest Log: [INFO] Checking for init_data.xml
2025-10-13 13:36:39 (1445043): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-13 13:36:39 (1445043): Guest Log: [INFO] Detected branch: prod
2025-10-13 13:36:39 (1445043): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-13 13:36:39 (1445043): Guest Log: Copying input files
2025-10-13 13:36:40 (1445043): Guest Log: Copied input files into RunAtlas.
2025-10-13 13:36:40 (1445043): Guest Log: Detected user-configured HTTP proxy at http://192.168.1.179:3128 - will set in /etc/cvmfs/default.local
2025-10-13 13:36:47 (1445043): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-13 13:36:47 (1445043): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-13 13:36:47 (1445043): Guest Log: 2.6.3.0 1517 0 29532 151660 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.1.179:3128 1
2025-10-13 13:36:48 (1445043): Guest Log: copied the webapp to /var/www
2025-10-13 13:36:48 (1445043): Guest Log: core_number=1
2025-10-13 13:36:48 (1445043): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-13 13:36:48 (1445043): Guest Log:  *** Starting ATLAS job. (PandaID=6840750446 taskID=46676269) ***
2025-10-13 15:14:52 (1445043): Status Report: Elapsed Time: '6000.000000'
2025-10-13 15:14:52 (1445043): Status Report: CPU Time: '5871.740000'
2025-10-13 16:53:53 (1445043): Status Report: Elapsed Time: '12000.000000'
2025-10-13 16:53:53 (1445043): Status Report: CPU Time: '11817.000000'
2025-10-13 18:32:53 (1445043): Status Report: Elapsed Time: '18000.000000'
2025-10-13 18:32:53 (1445043): Status Report: CPU Time: '17762.270000'
2025-10-13 20:11:53 (1445043): Status Report: Elapsed Time: '24000.000000'
2025-10-13 20:11:53 (1445043): Status Report: CPU Time: '23707.570000'
2025-10-13 21:50:54 (1445043): Status Report: Elapsed Time: '30000.000000'
2025-10-13 21:50:54 (1445043): Status Report: CPU Time: '29652.410000'
2025-10-13 23:29:54 (1445043): Status Report: Elapsed Time: '36000.000000'
2025-10-13 23:29:54 (1445043): Status Report: CPU Time: '35597.930000'
2025-10-13 23:56:04 (1445043): Guest Log:  *** Job finished ***
2025-10-13 23:56:04 (1445043): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:55:55,002 | INFO     | all workflow threads have been joined
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:55:55,002 | INFO     | end of generic workflow (traces error code: 0)
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:55:55,002 | INFO     | traces error code: 0
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:55:55,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,422 | INFO     | PID=5838 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,423 | INFO     | found 0 job(s) in 20 queues
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,423 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,423 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,423 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,423 | INFO     | [monitor] control thread has ended
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,512 [wrapper] ==== pilot stdout END ====
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,515 [wrapper] ==== wrapper stdout RESUME ====
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,519 [wrapper] pilotpid: 5838
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,522 [wrapper] Pilot exit status: 0
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,561 [wrapper] pandaids: 6840750446
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,583 [wrapper] cleanup supervisor_pilot 18642 5839
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,587 [wrapper] Test setup, not cleaning
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,591 [wrapper] apfmon messages muted
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,594 [wrapper] ==== wrapper stdout END ====
2025-10-13 23:56:04 (1445043): Guest Log: 2025-10-13 21:56:04,598 [wrapper] ==== wrapper stderr END ====
2025-10-13 23:56:04 (1445043): Guest Log:  *** Error codes and diagnostics ***
2025-10-13 23:56:04 (1445043): Guest Log:     "exeErrorCode": 0,
2025-10-13 23:56:04 (1445043): Guest Log:     "exeErrorDiag": "",
2025-10-13 23:56:04 (1445043): Guest Log:     "pilotErrorCode": 0,
2025-10-13 23:56:04 (1445043): Guest Log:     "pilotErrorDiag": "",
2025-10-13 23:56:04 (1445043): Guest Log:  *** Listing of results directory ***
2025-10-13 23:56:04 (1445043): Guest Log: total 203960
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct 12 21:12 pilot3.tar.gz
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct 12 21:19 queuedata.json
2025-10-13 23:56:04 (1445043): Guest Log: -rwx------. 1 atlas atlas     36292 Oct 12 21:20 runpilot2-wrapper.sh
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas     15120 Oct 13 11:36 start_atlas.sh
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas      9392 Oct 13 11:36 init_data.xml
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas    569682 Oct 13 11:36 input.tar.gz
2025-10-13 23:56:04 (1445043): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 13 11:36 EVNT.46676267._004825.pool.root.1 -> /data/./ATLAS.root_0
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas      2550 Oct 13 11:36 pandaJob.out
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas    972497 Oct 13 11:37 agis_schedconf.cvmfs.json
2025-10-13 23:56:04 (1445043): Guest Log: drwx------. 5 atlas atlas      4096 Oct 13 11:37 pilot3
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas 193392822 Oct 13 21:54 HITS.46676269._089818.pool.root.1
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas      1027 Oct 13 21:55 memory_monitor_summary.json
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 13 21:55 agis_ddmendpoints.agis.ALL.json
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas    696710 Oct 13 21:55 log.46676269._089818.job.log.tgz.1
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas        95 Oct 13 21:55 pilot_heartbeat.json
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas      7821 Oct 13 21:55 heartbeat.json
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas       744 Oct 13 21:56 pilotlog.txt
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas   5119275 Oct 13 21:56 log.46676269._089818.job.log.1
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas       357 Oct 13 21:56 output.list
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 13 21:56 runtime_log
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas   5836800 Oct 13 21:56 result.tar.gz
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas       657 Oct 13 21:56 ORjNDmkfIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwdlNDmX6mnKm.diag
2025-10-13 23:56:04 (1445043): Guest Log: -rw-r--r--. 1 atlas atlas      8516 Oct 13 21:56 runtime_log.err
2025-10-13 23:56:04 (1445043): Guest Log: Looking for outputfile HITS.46676269._089818.pool.root.1
2025-10-13 23:56:04 (1445043): Guest Log: HITS file was successfully produced
2025-10-13 23:56:04 (1445043): Guest Log: -rw-------. 1 atlas atlas 193392822 Oct 13 21:54 /home/atlas/RunAtlas/HITS.46676269._089818.pool.root.1
2025-10-13 23:56:04 (1445043): Guest Log: Successfully finished the ATLAS job!
2025-10-13 23:56:04 (1445043): Guest Log: Copying the results back to the shared directory!
2025-10-13 23:56:05 (1445043): Guest Log:  *** Contents of shared directory: ***
2025-10-13 23:56:05 (1445043): Guest Log: total 222540
2025-10-13 23:56:05 (1445043): Guest Log: -rw-r--r--. 1 root root 221435066 Oct 13 11:35 ATLAS.root_0
2025-10-13 23:56:05 (1445043): Guest Log: -rw-r--r--. 1 root root      9392 Oct 13 11:35 init_data.xml
2025-10-13 23:56:05 (1445043): Guest Log: -rw-r--r--. 1 root root    569682 Oct 13 11:35 input.tar.gz
2025-10-13 23:56:05 (1445043): Guest Log: -rw-r--r--. 1 root root   5836800 Oct 13 21:56 result.tar.gz
2025-10-13 23:56:05 (1445043): Guest Log: -rw-r--r--. 1 root root     15120 Oct 13 11:35 start_atlas.sh
2025-10-13 23:56:05 (1445043): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-13 23:56:05 (1445043): VM Completion File Detected.
2025-10-13 23:56:05 (1445043): Powering off VM.
2025-10-13 23:56:06 (1445043): Successfully stopped VM.
2025-10-13 23:56:06 (1445043): Deregistering VM. (boinc_ea63dec629da7f6f, slot#6)
2025-10-13 23:56:06 (1445043): Removing network bandwidth throttle group from VM.
2025-10-13 23:56:07 (1445043): Removing VM from VirtualBox.
2025-10-13 23:56:12 (1445043): called boinc_finish(0)

</stderr_txt>
]]>

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