Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:09:53 (3277274): wrapper (7.7.26015): starting
10:09:53 (3277274): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 10:09:53] Arguments: --nthreads 8
[2025-10-13 10:09:53] Threads: 8
[2025-10-13 10:09:53] Checking for CVMFS
[2025-10-13 10:09:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:09:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:09:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:09:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:09:54] 2.13.2.0 2033853 4760 49800 151657 1 56 2615905 4096000 0 130560 1 3266971 99.989 163896 466 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-13 10:09:54] CVMFS is ok
[2025-10-13 10:09:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:09:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:09:54] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-13 10:09:54] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-13 10:09:54] Further information can be found at the LHC@home message board.
[2025-10-13 10:09:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:09:54] Checking for apptainer binary...
[2025-10-13 10:09:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:09:54] Running /usr/bin/apptainer --version
[2025-10-13 10:09:54] apptainer version 1.4.3
[2025-10-13 10:09:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:09:55] lab01ubuntu
[2025-10-13 10:09:55] apptainer works
[2025-10-13 10:09:55] Set ATHENA_PROC_NUMBER=8
[2025-10-13 10:09:55] Set ATHENA_CORE_NUMBER=8
[2025-10-13 10:09:55] Starting ATLAS job with PandaID=6830683599
[2025-10-13 10:09:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:07:59]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:07:59] 2025-10-13 12:07:26,443 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:07:59] 2025-10-13 12:07:26,449 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:07:59] 2025-10-13 12:07:26,449 | INFO     | sum of square deviations: 459366752.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,451 | INFO     | sum of deviations: 26366777036.500008
[2025-10-13 12:07:59] 2025-10-13 12:07:26,451 | INFO     | mean x: 1760353729.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,452 | INFO     | mean y: 2511068.201754386
[2025-10-13 12:07:59] 2025-10-13 12:07:26,452 | INFO     | -- intersect: -101038441587.80864
[2025-10-13 12:07:59] 2025-10-13 12:07:26,452 | INFO     | intersect: -101038441587.80864
[2025-10-13 12:07:59] 2025-10-13 12:07:26,453 | INFO     | chi2: 3.1592332818169178
[2025-10-13 12:07:59] 2025-10-13 12:07:26,454 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,455 | INFO     | sum of deviations: 25754052563.000004
[2025-10-13 12:07:59] 2025-10-13 12:07:26,455 | INFO     | mean x: 1760353577.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,456 | INFO     | mean y: 2509452.5321100918
[2025-10-13 12:07:59] 2025-10-13 12:07:26,456 | INFO     | -- intersect: -112905336556.78722
[2025-10-13 12:07:59] 2025-10-13 12:07:26,456 | INFO     | intersect: -112905336556.78722
[2025-10-13 12:07:59] 2025-10-13 12:07:26,457 | INFO     | chi2: 3.1621428700424303
[2025-10-13 12:07:59] 2025-10-13 12:07:26,457 | INFO     | current chi2=3.1621428700424303 (change=-0.09209792269088872 %)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,458 | INFO     | right removable region: 108
[2025-10-13 12:07:59] 2025-10-13 12:07:26,458 | INFO     | sum of square deviations: 401533110.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,459 | INFO     | sum of deviations: -2443873744.0000005
[2025-10-13 12:07:59] 2025-10-13 12:07:26,460 | INFO     | mean x: 1760353882.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,460 | INFO     | mean y: 2586655.2660550456
[2025-10-13 12:07:59] 2025-10-13 12:07:26,460 | INFO     | -- intersect: 10716728341.784199
[2025-10-13 12:07:59] 2025-10-13 12:07:26,461 | INFO     | intersect: 10716728341.784199
[2025-10-13 12:07:59] 2025-10-13 12:07:26,461 | INFO     | chi2: 0.5272235807549684
[2025-10-13 12:07:59] 2025-10-13 12:07:26,462 | INFO     | current chi2=0.5272235807549684 (change=83.31166033893658 %)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,462 | INFO     | sum of square deviations: 348769330.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,463 | INFO     | sum of deviations: -11517856580.999998
[2025-10-13 12:07:59] 2025-10-13 12:07:26,464 | INFO     | mean x: 1760354034.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,464 | INFO     | mean y: 2612245.6346153845
[2025-10-13 12:07:59] 2025-10-13 12:07:26,464 | INFO     | -- intersect: 58137039665.4875
[2025-10-13 12:07:59] 2025-10-13 12:07:26,465 | INFO     | intersect: 58137039665.4875
[2025-10-13 12:07:59] 2025-10-13 12:07:26,465 | INFO     | chi2: 0.032583504193864916
[2025-10-13 12:07:59] 2025-10-13 12:07:26,466 | INFO     | current chi2=0.032583504193864916 (change=93.81979384396914 %)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,466 | INFO     | sum of square deviations: 300842850.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,467 | INFO     | sum of deviations: -10939038500.000002
[2025-10-13 12:07:59] 2025-10-13 12:07:26,468 | INFO     | mean x: 1760354187.0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,468 | INFO     | mean y: 2610383.98989899
[2025-10-13 12:07:59] 2025-10-13 12:07:26,468 | INFO     | -- intersect: 64011385148.71907
[2025-10-13 12:07:59] 2025-10-13 12:07:26,469 | INFO     | intersect: 64011385148.71907
[2025-10-13 12:07:59] 2025-10-13 12:07:26,469 | INFO     | chi2: 0.029063926258708482
[2025-10-13 12:07:59] 2025-10-13 12:07:26,470 | INFO     | current chi2=0.029063926258708482 (change=10.801717071975116 %)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,470 | INFO     | left removable region: 30
[2025-10-13 12:07:59] 2025-10-13 12:07:26,470 | INFO     | sum of square deviations: 147126479.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,471 | INFO     | sum of deviations: -6852070860.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,472 | INFO     | mean x: 1760354461.5
[2025-10-13 12:07:59] 2025-10-13 12:07:26,472 | INFO     | mean y: 2601139.2435897435
[2025-10-13 12:07:59] 2025-10-13 12:07:26,472 | INFO     | -- intersect: 81986983221.84021
[2025-10-13 12:07:59] 2025-10-13 12:07:26,473 | INFO     | intersect: 81986983221.84021
[2025-10-13 12:07:59] 2025-10-13 12:07:26,473 | INFO     | chi2: 0.023955879547808877
[2025-10-13 12:07:59] 2025-10-13 12:07:26,473 | INFO     | -- intersect: 81986983221.84021
[2025-10-13 12:07:59] 2025-10-13 12:07:26,474 | INFO     | current memory leak: -46.57 B/s (using 78 data points, chi2=0.02)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,475 | INFO     | could have reported an average CPU frequency of 2893 MHz (7 samples)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,475 | INFO     | ..............................
[2025-10-13 12:07:59] 2025-10-13 12:07:26,475 | INFO     | . Timing measurements:
[2025-10-13 12:07:59] 2025-10-13 12:07:26,476 | INFO     | . get job = 0 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,476 | INFO     | . initial setup = 4 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,476 | INFO     | . payload setup = 15 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,477 | INFO     | . stage-in = 0 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,477 | INFO     | . payload execution = 6945 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,477 | INFO     | . stage-out = 1 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,477 | INFO     | . log creation = 0 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,478 | INFO     | ..............................
[2025-10-13 12:07:59] 2025-10-13 12:07:26,708 | INFO     | 
[2025-10-13 12:07:59] 2025-10-13 12:07:26,708 | INFO     | job summary report
[2025-10-13 12:07:59] 2025-10-13 12:07:26,709 | INFO     | --------------------------------------------------
[2025-10-13 12:07:59] 2025-10-13 12:07:26,709 | INFO     | PanDA job id: 6830683599
[2025-10-13 12:07:59] 2025-10-13 12:07:26,709 | INFO     | task id: 46376994
[2025-10-13 12:07:59] 2025-10-13 12:07:26,710 | INFO     | errors: (none)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,710 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:07:59] 2025-10-13 12:07:26,710 | INFO     | pilot state: finished 
[2025-10-13 12:07:59] 2025-10-13 12:07:26,711 | INFO     | transexitcode: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,711 | INFO     | exeerrorcode: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,711 | INFO     | exeerrordiag: 
[2025-10-13 12:07:59] 2025-10-13 12:07:26,711 | INFO     | exitcode: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,712 | INFO     | exitmsg: OK
[2025-10-13 12:07:59] 2025-10-13 12:07:26,712 | INFO     | cpuconsumptiontime: 50559 s
[2025-10-13 12:07:59] 2025-10-13 12:07:26,712 | INFO     | nevents: 400
[2025-10-13 12:07:59] 2025-10-13 12:07:26,712 | INFO     | neventsw: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,713 | INFO     | pid: 3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:26,713 | INFO     | pgrp: 3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:26,713 | INFO     | corecount: 8
[2025-10-13 12:07:59] 2025-10-13 12:07:26,714 | INFO     | event service: False
[2025-10-13 12:07:59] 2025-10-13 12:07:26,714 | INFO     | sizes: {0: 2347988, 1: 2348680, 2: 2348879, 13: 2348879, 17: 2349197, 23: 2349225, 6965: 2376550, 6967: 2385562, 6970: 2385618, 6989: 2385812}
[2025-10-13 12:07:59] 2025-10-13 12:07:26,714 | INFO     | --------------------------------------------------
[2025-10-13 12:07:59] 2025-10-13 12:07:26,719 | INFO     | 
[2025-10-13 12:07:59] 2025-10-13 12:07:26,719 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-10-13 12:07:59] 2025-10-13 12:07:26,766 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,767 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,767 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,768 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,768 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,768 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,769 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,769 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,770 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,770 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,770 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,772 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,772 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,772 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,773 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,773 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,774 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,774 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,775 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:07:59] 2025-10-13 12:07:26,775 | INFO     | job 6830683599 has completed (purged errors)
[2025-10-13 12:07:59] 2025-10-13 12:07:26,776 | INFO     | overall cleanup function is called
[2025-10-13 12:07:59] 2025-10-13 12:07:26,936 | INFO     | PID=3281000 has CPU usage=5.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:07:59] 2025-10-13 12:07:27,794 | INFO     | --- collectZombieJob: --- 10, [3287409]
[2025-10-13 12:07:59] 2025-10-13 12:07:27,794 | INFO     | zombie collector waiting for pid 3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:27,794 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:07:59] 2025-10-13 12:07:27,795 | INFO     | collected zombie processes
[2025-10-13 12:07:59] 2025-10-13 12:07:27,795 | INFO     | will attempt to kill all subprocesses of pid=3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:27,937 | INFO     | process IDs to be killed: [3287409] (in reverse order)
[2025-10-13 12:07:59] 2025-10-13 12:07:28,024 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:07:59] 2025-10-13 12:07:28,024 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:07:59] 2025-10-13 12:07:28,026 | INFO     | did not find any defunct processes belonging to 3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:28,028 | INFO     | did not find any defunct processes belonging to 3287409
[2025-10-13 12:07:59] 2025-10-13 12:07:28,028 | INFO     | ready for new job
[2025-10-13 12:07:59] 2025-10-13 12:07:28,028 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:07:59] 2025-10-13 12:07:28,030 | INFO     | ***************************************
[2025-10-13 12:07:59] 2025-10-13 12:07:28,030 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-13 12:07:59] 2025-10-13 12:07:28,030 | INFO     | ***************************************
[2025-10-13 12:07:59] 2025-10-13 12:07:28,030 | INFO     | 
[2025-10-13 12:07:59] 2025-10-13 12:07:28,031 | INFO     | pilot is running in a VM
[2025-10-13 12:07:59] 2025-10-13 12:07:28,031 | INFO     | architecture information:
[2025-10-13 12:07:59] 2025-10-13 12:07:28,031 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:07:59] 2025-10-13 12:07:28,063 | INFO     | cat /etc/os-release:
[2025-10-13 12:07:59] NAME="CentOS Linux"
[2025-10-13 12:07:59] VERSION="7 (Core)"
[2025-10-13 12:07:59] ID="centos"
[2025-10-13 12:07:59] ID_LIKE="rhel fedora"
[2025-10-13 12:07:59] VERSION_ID="7"
[2025-10-13 12:07:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:07:59] ANSI_COLOR="0;31"
[2025-10-13 12:07:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:07:59] HOME_URL="https://www.centos.org/"
[2025-10-13 12:07:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:07:59] 
[2025-10-13 12:07:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:07:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:07:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:07:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:07:59] 
[2025-10-13 12:07:59] 2025-10-13 12:07:28,064 | INFO     | ***************************************
[2025-10-13 12:07:59] 2025-10-13 12:07:28,568 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-10-13 12:07:59] 2025-10-13 12:07:28,603 | INFO     | sufficient remaining disk space (16601055232 B)
[2025-10-13 12:07:59] 2025-10-13 12:07:28,604 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:07:59] 2025-10-13 12:07:28,605 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:07:59] 2025-10-13 12:07:28,605 | INFO     | update_server=False
[2025-10-13 12:07:59] 2025-10-13 12:07:28,606 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:07:59] 2025-10-13 12:07:28,606 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:07:59] 2025-10-13 12:07:28,621 | INFO     | all data control threads have been joined
[2025-10-13 12:07:59] 2025-10-13 12:07:28,822 | INFO     | all job control threads have been joined
[2025-10-13 12:07:59] 2025-10-13 12:07:28,916 | INFO     | all payload control threads have been joined
[2025-10-13 12:07:59] 2025-10-13 12:07:29,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:07:59] 2025-10-13 12:07:29,307 | INFO     | aborting loop
[2025-10-13 12:07:59] 2025-10-13 12:07:29,612 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,613 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,627 | INFO     | [data] control thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,656 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,806 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,828 | INFO     | [job] control thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:29,922 | INFO     | [payload] control thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,015 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:07:59] 2025-10-13 12:07:30,313 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,332 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,419 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,584 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,605 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:30,747 | INFO     | [job] validate thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:31,990 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:07:59] 2025-10-13 12:07:32,021 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:34,415 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:07:59] 2025-10-13 12:07:35,997 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:38,958 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:07:59] 2025-10-13 12:07:39,964 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:07:59] 2025-10-13 12:07:41,631 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132612156008256)>', '<ExcThread(monitor, started 132611074684672)>']
[2025-10-13 12:07:59] 2025-10-13 12:07:46,657 | INFO     | all workflow threads have been joined
[2025-10-13 12:07:59] 2025-10-13 12:07:46,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:07:59] 2025-10-13 12:07:46,659 | INFO     | traces error code: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:46,660 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:07:59] 2025-10-13 12:07:59,169 | INFO     | PID=3281000 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:07:59] 2025-10-13 12:07:59,170 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:07:59] 2025-10-13 12:07:59,170 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:07:59] 2025-10-13 12:07:59,170 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:07:59] 2025-10-13 12:07:59,170 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:07:59] 2025-10-13 12:07:59,170 | INFO     | [monitor] control thread has ended
[2025-10-13 12:07:59] 2025-10-13 12:07:59,367 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:07:59] 2025-10-13 12:07:59,376 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:07:59] 2025-10-13 12:07:59,385 [wrapper] pilotpid: 3281000
[2025-10-13 12:07:59] 2025-10-13 12:07:59,392 [wrapper] Pilot exit status: 0
[2025-10-13 12:07:59] 2025-10-13 12:07:59,424 [wrapper] pandaids: 6830683599
[2025-10-13 12:07:59] 2025-10-13 12:07:59,502 [wrapper] cleanup supervisor_pilot 3302512 3281001
[2025-10-13 12:07:59] 2025-10-13 12:07:59,510 [wrapper] Test setup, not cleaning
[2025-10-13 12:07:59] 2025-10-13 12:07:59,520 [wrapper] apfmon messages muted
[2025-10-13 12:07:59] 2025-10-13 12:07:59,528 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:07:59] 2025-10-13 12:07:59,537 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:07:59]  *** Error codes and diagnostics ***
[2025-10-13 12:07:59]     "exeErrorCode": 0,
[2025-10-13 12:07:59]     "exeErrorDiag": "",
[2025-10-13 12:07:59]     "pilotErrorCode": 0,
[2025-10-13 12:07:59]     "pilotErrorDiag": "",
[2025-10-13 12:07:59]  *** Listing of results directory ***
[2025-10-13 12:07:59] total 419432
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc    552446 Oct  5 01:02 pilot3.tar.gz
[2025-10-13 12:07:59] -rwx------ 1 boinc boinc     36292 Oct  5 01:09 runpilot2-wrapper.sh
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc      5112 Oct  5 01:09 queuedata.json
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:07:59] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:09 run_atlas
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:09 job.xml
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc 221804176 Oct 13 10:09 EVNT.46376992._000397.pool.root.1
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc      6315 Oct 13 10:09 init_data.xml
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:09 start_atlas.sh
[2025-10-13 12:07:59] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:09 shared
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc    565608 Oct 13 10:09 input.tar.gz
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:09 boinc_lockfile
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc      2558 Oct 13 10:09 pandaJob.out
[2025-10-13 12:07:59] -rw------- 1 boinc boinc    972849 Oct 13 10:10 agis_schedconf.cvmfs.json
[2025-10-13 12:07:59] -rw------- 1 boinc boinc   1560580 Oct 13 10:10 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:07:59] drwx------ 4 boinc boinc      4096 Oct 13 10:10 pilot3
[2025-10-13 12:07:59] -rw------- 1 boinc boinc 201036225 Oct 13 12:06 HITS.46376994._019472.pool.root.1
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:06 boinc_task_state.xml
[2025-10-13 12:07:59] -rw------- 1 boinc boinc      1014 Oct 13 12:06 memory_monitor_summary.json
[2025-10-13 12:07:59] -rw------- 1 boinc boinc    374332 Oct 13 12:07 log.46376994._019472.job.log.tgz.1
[2025-10-13 12:07:59] -rw------- 1 boinc boinc        95 Oct 13 12:07 pilot_heartbeat.json
[2025-10-13 12:07:59] -rw------- 1 boinc boinc      7762 Oct 13 12:07 heartbeat.json
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:07 wrapper_checkpoint.txt
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:07 boinc_mmap_file
[2025-10-13 12:07:59] -rw------- 1 boinc boinc       747 Oct 13 12:07 pilotlog.txt
[2025-10-13 12:07:59] -rw------- 1 boinc boinc   1011227 Oct 13 12:07 log.46376994._019472.job.log.1
[2025-10-13 12:07:59] -rw------- 1 boinc boinc       357 Oct 13 12:07 output.list
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:07 runtime_log
[2025-10-13 12:07:59] -rw------- 1 boinc boinc   1402880 Oct 13 12:07 result.tar.gz
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc      8775 Oct 13 12:07 runtime_log.err
[2025-10-13 12:07:59] -rw------- 1 boinc boinc       647 Oct 13 12:07 ChjNDmxQSP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm7vEMDmX4TJjn.diag
[2025-10-13 12:07:59] -rw-r--r-- 1 boinc boinc     21229 Oct 13 12:07 stderr.txt
[2025-10-13 12:07:59] HITS file was successfully produced:
[2025-10-13 12:07:59] -rw------- 1 boinc boinc 201036225 Oct 13 12:06 shared/HITS.pool.root.1
[2025-10-13 12:07:59]  *** Contents of shared directory: ***
[2025-10-13 12:07:59] total 414888
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc 221804176 Oct 13 10:09 ATLAS.root_0
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:09 start_atlas.sh
[2025-10-13 12:07:59] -rw-r--r-- 2 boinc boinc    565608 Oct 13 10:09 input.tar.gz
[2025-10-13 12:07:59] -rw------- 1 boinc boinc 201036225 Oct 13 12:06 HITS.pool.root.1
[2025-10-13 12:07:59] -rw------- 1 boinc boinc   1402880 Oct 13 12:07 result.tar.gz
12:08:01 (3277274): run_atlas exited; CPU time 50575.056258
12:08:01 (3277274): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN