Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:34 (712028): wrapper (7.7.26015): starting
03:41:34 (712028): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 03:41:34] Arguments: --nthreads 9
[2025-10-13 03:41:34] Threads: 9
[2025-10-13 03:41:34] Checking for CVMFS
[2025-10-13 03:41:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:41:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:41:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:41:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:41:34] 2.13.2.0 1173468 124969 168256 151653 1 195 39955240 40960001 26712 16776704 0 257318508 99.765 157090869 35988 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:41:34] CVMFS is ok
[2025-10-13 03:41:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:41:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:41:34] Further information can be found at the LHC@home message board.
[2025-10-13 03:41:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:41:34] Checking for apptainer binary...
[2025-10-13 03:41:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:41:34] Running /usr/bin/apptainer --version
[2025-10-13 03:41:35] apptainer version 1.4.3-1.el9
[2025-10-13 03:41:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:41:35] c-212-20.aglt2.org
[2025-10-13 03:41:35] apptainer works
[2025-10-13 03:41:35] Set ATHENA_PROC_NUMBER=9
[2025-10-13 03:41:35] Set ATHENA_CORE_NUMBER=9
[2025-10-13 03:41:35] Starting ATLAS job with PandaID=6841125955
[2025-10-13 03:41:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:27:15]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:27:15] 2025-10-13 10:26:04,519 | INFO     | sum of square deviations: 1294111500.4223626
[2025-10-13 06:27:15] 2025-10-13 10:26:04,520 | INFO     | sum of deviations: 32336809247.366463
[2025-10-13 06:27:15] 2025-10-13 10:26:04,520 | INFO     | mean x: 1760346227.279503
[2025-10-13 06:27:15] 2025-10-13 10:26:04,520 | INFO     | mean y: 2441509.0807453417
[2025-10-13 06:27:15] 2025-10-13 10:26:04,546 | INFO     | -- intersect: -43984479356.918884
[2025-10-13 06:27:15] 2025-10-13 10:26:04,546 | INFO     | intersect: -43984479356.918884
[2025-10-13 06:27:15] 2025-10-13 10:26:04,547 | INFO     | chi2: 4.363246476869192
[2025-10-13 06:27:15] 2025-10-13 10:26:04,548 | INFO     | sum of square deviations: 1177247943.1474338
[2025-10-13 06:27:15] 2025-10-13 10:26:04,549 | INFO     | sum of deviations: 52582013289.6987
[2025-10-13 06:27:15] 2025-10-13 10:26:04,549 | INFO     | mean x: 1760346074.775641
[2025-10-13 06:27:15] 2025-10-13 10:26:04,550 | INFO     | mean y: 2467393.762820513
[2025-10-13 06:27:15] 2025-10-13 10:26:04,550 | INFO     | -- intersect: -78623739801.68228
[2025-10-13 06:27:15] 2025-10-13 10:26:04,550 | INFO     | intersect: -78623739801.68228
[2025-10-13 06:27:15] 2025-10-13 10:26:04,551 | INFO     | chi2: 2.762411152708317
[2025-10-13 06:27:15] 2025-10-13 10:26:04,551 | INFO     | current chi2=2.762411152708317 (change=36.68908764717643 %)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,551 | INFO     | sum of square deviations: 1067649486.3178797
[2025-10-13 06:27:15] 2025-10-13 10:26:04,552 | INFO     | sum of deviations: 50636361446.96022
[2025-10-13 06:27:15] 2025-10-13 10:26:04,552 | INFO     | mean x: 1760345922.2781458
[2025-10-13 06:27:15] 2025-10-13 10:26:04,552 | INFO     | mean y: 2464685.715231788
[2025-10-13 06:27:15] 2025-10-13 10:26:04,552 | INFO     | -- intersect: -83487026513.85167
[2025-10-13 06:27:15] 2025-10-13 10:26:04,553 | INFO     | intersect: -83487026513.85167
[2025-10-13 06:27:15] 2025-10-13 10:26:04,553 | INFO     | chi2: 2.762761587763435
[2025-10-13 06:27:15] 2025-10-13 10:26:04,553 | INFO     | current chi2=2.762761587763435 (change=-0.01268583986039344 %)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,553 | INFO     | right removable region: 150
[2025-10-13 06:27:15] 2025-10-13 10:26:04,553 | INFO     | sum of square deviations: 1177239770.0192287
[2025-10-13 06:27:15] 2025-10-13 10:26:04,554 | INFO     | sum of deviations: -5748283532.519232
[2025-10-13 06:27:15] 2025-10-13 10:26:04,554 | INFO     | mean x: 1760346379.7884614
[2025-10-13 06:27:15] 2025-10-13 10:26:04,554 | INFO     | mean y: 2490874.044871795
[2025-10-13 06:27:15] 2025-10-13 10:26:04,554 | INFO     | -- intersect: 8597995684.677101
[2025-10-13 06:27:15] 2025-10-13 10:26:04,554 | INFO     | intersect: 8597995684.677101
[2025-10-13 06:27:15] 2025-10-13 10:26:04,555 | INFO     | chi2: 1.972670100251069
[2025-10-13 06:27:15] 2025-10-13 10:26:04,555 | INFO     | current chi2=1.972670100251069 (change=54.788937303708316 %)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,555 | INFO     | sum of square deviations: 1067623989.5894041
[2025-10-13 06:27:15] 2025-10-13 10:26:04,556 | INFO     | sum of deviations: -17358355310.78808
[2025-10-13 06:27:15] 2025-10-13 10:26:04,556 | INFO     | mean x: 1760346532.2980132
[2025-10-13 06:27:15] 2025-10-13 10:26:04,556 | INFO     | mean y: 2506974.0397350993
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | -- intersect: 28623745233.67678
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | intersect: 28623745233.67678
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | chi2: 1.7699165390994986
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | current chi2=1.7699165390994986 (change=10.278128163739344 %)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | left removable region: 20
[2025-10-13 06:27:15] 2025-10-13 10:26:04,557 | INFO     | sum of square deviations: 681258678.9307669
[2025-10-13 06:27:15] 2025-10-13 10:26:04,558 | INFO     | sum of deviations: -2907468613.9538484
[2025-10-13 06:27:15] 2025-10-13 10:26:04,558 | INFO     | mean x: 1760346501.823077
[2025-10-13 06:27:15] 2025-10-13 10:26:04,558 | INFO     | mean y: 2546297.7846153844
[2025-10-13 06:27:15] 2025-10-13 10:26:04,558 | INFO     | -- intersect: 7515334555.788123
[2025-10-13 06:27:15] 2025-10-13 10:26:04,558 | INFO     | intersect: 7515334555.788123
[2025-10-13 06:27:15] 2025-10-13 10:26:04,559 | INFO     | chi2: 0.03603654812507239
[2025-10-13 06:27:15] 2025-10-13 10:26:04,559 | INFO     | -- intersect: 7515334555.788123
[2025-10-13 06:27:15] 2025-10-13 10:26:04,559 | INFO     | current memory leak: -4.27 B/s (using 130 data points, chi2=0.04)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,560 | INFO     | could have reported an average CPU frequency of 3161 MHz (9 samples)
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | ..............................
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . Timing measurements:
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . get job = 0 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . initial setup = 2 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . payload setup = 9 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . stage-in = 0 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,561 | INFO     | . payload execution = 9771 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,562 | INFO     | . stage-out = 5 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,562 | INFO     | . log creation = 1 s
[2025-10-13 06:27:15] 2025-10-13 10:26:04,562 | INFO     | ..............................
[2025-10-13 06:27:15] 2025-10-13 10:26:05,127 | INFO     | 
[2025-10-13 06:27:15] 2025-10-13 10:26:05,128 | INFO     | job summary report
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | --------------------------------------------------
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | PanDA job id: 6841125955
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | task id: 46676269
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | errors: (none)
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | pilot state: finished 
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | transexitcode: 0
[2025-10-13 06:27:15] 2025-10-13 10:26:05,129 | INFO     | exeerrorcode: 0
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | exeerrordiag: 
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | exitcode: 0
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | exitmsg: OK
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | cpuconsumptiontime: 32948 s
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | nevents: 400
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | neventsw: 0
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | pid: 724321
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | pgrp: 724321
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | corecount: 9
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | event service: False
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | sizes: {0: 2348857, 6: 2349119, 11: 2349147, 9786: 2377634, 9792: 2386632, 9794: 2386688, 9834: 2387074}
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | --------------------------------------------------
[2025-10-13 06:27:15] 2025-10-13 10:26:05,130 | INFO     | 
[2025-10-13 06:27:15] 2025-10-13 10:26:05,131 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 06:27:15] 2025-10-13 10:26:05,367 | INFO     | time since job start (9854s) is within the limit (172800.0s)
[2025-10-13 06:27:15] 2025-10-13 10:26:05,498 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,498 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:27:15] 2025-10-13 10:26:05,499 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,500 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:27:15] 2025-10-13 10:26:05,500 | INFO     | job 6841125955 has completed (purged errors)
[2025-10-13 06:27:15] 2025-10-13 10:26:05,500 | INFO     | overall cleanup function is called
[2025-10-13 06:27:15] 2025-10-13 10:26:06,514 | INFO     | --- collectZombieJob: --- 10, [724321]
[2025-10-13 06:27:15] 2025-10-13 10:26:06,515 | INFO     | zombie collector waiting for pid 724321
[2025-10-13 06:27:15] 2025-10-13 10:26:06,515 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:27:15] 2025-10-13 10:26:06,515 | INFO     | collected zombie processes
[2025-10-13 06:27:15] 2025-10-13 10:26:06,515 | INFO     | will attempt to kill all subprocesses of pid=724321
[2025-10-13 06:27:15] 2025-10-13 10:26:07,362 | INFO     | process IDs to be killed: [724321] (in reverse order)
[2025-10-13 06:27:15] 2025-10-13 10:26:07,594 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:27:15] 2025-10-13 10:26:07,594 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:27:15] 2025-10-13 10:26:07,640 | INFO     | did not find any defunct processes belonging to 724321
[2025-10-13 06:27:15] 2025-10-13 10:26:07,659 | INFO     | did not find any defunct processes belonging to 724321
[2025-10-13 06:27:15] 2025-10-13 10:26:07,659 | INFO     | ready for new job
[2025-10-13 06:27:15] 2025-10-13 10:26:07,660 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:27:15] 2025-10-13 10:26:07,663 | INFO     | ***************************************
[2025-10-13 06:27:15] 2025-10-13 10:26:07,670 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:27:15] 2025-10-13 10:26:07,670 | INFO     | ***************************************
[2025-10-13 06:27:15] 2025-10-13 10:26:07,670 | INFO     | 
[2025-10-13 06:27:15] 2025-10-13 10:26:07,725 | INFO     | architecture information:
[2025-10-13 06:27:15] 2025-10-13 10:26:07,729 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:27:15] 2025-10-13 10:26:07,817 | INFO     | cat /etc/os-release:
[2025-10-13 06:27:15] NAME="CentOS Linux"
[2025-10-13 06:27:15] VERSION="7 (Core)"
[2025-10-13 06:27:15] ID="centos"
[2025-10-13 06:27:15] ID_LIKE="rhel fedora"
[2025-10-13 06:27:15] VERSION_ID="7"
[2025-10-13 06:27:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:27:15] ANSI_COLOR="0;31"
[2025-10-13 06:27:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:27:15] HOME_URL="https://www.centos.org/"
[2025-10-13 06:27:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:27:15] 
[2025-10-13 06:27:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:27:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:27:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:27:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:27:15] 
[2025-10-13 06:27:15] 2025-10-13 10:26:07,818 | INFO     | ***************************************
[2025-10-13 06:27:15] 2025-10-13 10:26:08,321 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 06:27:15] 2025-10-13 10:26:08,493 | INFO     | sufficient remaining disk space (127629524992 B)
[2025-10-13 06:27:15] 2025-10-13 10:26:08,493 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:27:15] 2025-10-13 10:26:08,494 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:27:15] 2025-10-13 10:26:08,494 | INFO     | update_server=False
[2025-10-13 06:27:15] 2025-10-13 10:26:08,494 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:27:15] 2025-10-13 10:26:08,498 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:27:15] 2025-10-13 10:26:08,662 | INFO     | all data control threads have been joined
[2025-10-13 06:27:15] 2025-10-13 10:26:08,722 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:27:15] 2025-10-13 10:26:08,722 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:27:15] 2025-10-13 10:26:08,722 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:27:15] 2025-10-13 10:26:08,722 | INFO     | will abort loop
[2025-10-13 06:27:15] 2025-10-13 10:26:08,735 | INFO     | all payload control threads have been joined
[2025-10-13 06:27:15] 2025-10-13 10:26:08,735 | INFO     | all job control threads have been joined
[2025-10-13 06:27:15] 2025-10-13 10:26:09,228 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:27:15] 2025-10-13 10:26:09,502 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:09,669 | INFO     | [data] control thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:09,735 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:09,741 | INFO     | [payload] control thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:09,742 | INFO     | [job] control thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:09,881 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:27:15] 2025-10-13 10:26:10,054 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,155 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,203 | INFO     | [job] validate thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,207 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,663 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,687 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,715 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,745 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:10,887 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:11,240 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:12,509 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:27:15] 2025-10-13 10:26:41,592 | INFO     | PID=715713 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 06:27:15] 2025-10-13 10:26:41,592 | INFO     | .. there are 24 such processes running
[2025-10-13 06:27:15] 2025-10-13 10:26:41,592 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:27:15] 2025-10-13 10:26:41,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:27:15] 2025-10-13 10:26:41,596 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:27:15] 2025-10-13 10:26:49,317 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-13 06:27:15] 2025-10-13 10:27:08,380 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:27:15] 2025-10-13 10:27:09,626 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358580725568)>', '<ExcThread(monitor, started 140358079981312)>']
[2025-10-13 06:27:15] 2025-10-13 10:27:09,778 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:27:15] 2025-10-13 10:27:09,778 | INFO     | [monitor] control thread has ended
[2025-10-13 06:27:15] 2025-10-13 10:27:14,654 | INFO     | all workflow threads have been joined
[2025-10-13 06:27:15] 2025-10-13 10:27:14,658 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:27:15] 2025-10-13 10:27:14,658 | INFO     | traces error code: 0
[2025-10-13 06:27:15] 2025-10-13 10:27:14,659 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:27:15] 2025-10-13 10:27:15,175 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:27:15] 2025-10-13 10:27:15,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:27:15] 2025-10-13 10:27:15,182 [wrapper] pilotpid: 715713
[2025-10-13 06:27:15] 2025-10-13 10:27:15,186 [wrapper] Pilot exit status: 0
[2025-10-13 06:27:15] 2025-10-13 10:27:15,215 [wrapper] pandaids: 6841125955
[2025-10-13 06:27:15] 2025-10-13 10:27:15,319 [wrapper] cleanup supervisor_pilot 1174667 715714
[2025-10-13 06:27:15] 2025-10-13 10:27:15,325 [wrapper] Test setup, not cleaning
[2025-10-13 06:27:15] 2025-10-13 10:27:15,333 [wrapper] apfmon messages muted
[2025-10-13 06:27:15] 2025-10-13 10:27:15,336 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:27:15] 2025-10-13 10:27:15,339 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:27:15]  *** Error codes and diagnostics ***
[2025-10-13 06:27:15]     "exeErrorCode": 0,
[2025-10-13 06:27:15]     "exeErrorDiag": "",
[2025-10-13 06:27:15]     "pilotErrorCode": 0,
[2025-10-13 06:27:15]     "pilotErrorDiag": "",
[2025-10-13 06:27:15]  *** Listing of results directory ***
[2025-10-13 06:27:15] total 402104
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 06:27:15] -rwx------. 1 boincer umatlas     36292 Oct 12 22:13 runpilot2-wrapper.sh
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:13 queuedata.json
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:27:15] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:41 run_atlas
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:41 job.xml
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas 219645271 Oct 13 03:41 EVNT.46676267._004358.pool.root.1
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 06:27:15] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:41 shared
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 03:41 input.tar.gz
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:41 boinc_lockfile
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:41 pandaJob.out
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas    972849 Oct 13 03:41 agis_schedconf.cvmfs.json
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:27:15] drwx------. 5 boincer umatlas      4096 Oct 13 03:41 pilot3
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 06:20 init_data.xml
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas 184820475 Oct 13 06:23 HITS.46676269._094728.pool.root.1
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas       530 Oct 13 06:23 boinc_task_state.xml
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas      1046 Oct 13 06:25 memory_monitor_summary.json
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas    417084 Oct 13 06:25 log.46676269._094728.job.log.tgz.1
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas        95 Oct 13 06:26 pilot_heartbeat.json
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas      7787 Oct 13 06:26 heartbeat.json
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas      5010 Oct 13 06:27 pilotlog.txt
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:27 wrapper_checkpoint.txt
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:27 boinc_mmap_file
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas   1277069 Oct 13 06:27 log.46676269._094728.job.log.1
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas       357 Oct 13 06:27 output.list
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:27 runtime_log
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas   1710080 Oct 13 06:27 result.tar.gz
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas      8703 Oct 13 06:27 runtime_log.err
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas       656 Oct 13 06:27 GqyMDmKFNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpVVMDmoP076m.diag
[2025-10-13 06:27:15] -rw-r--r--. 1 boincer umatlas     21020 Oct 13 06:27 stderr.txt
[2025-10-13 06:27:15] HITS file was successfully produced:
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas 184820475 Oct 13 06:23 shared/HITS.pool.root.1
[2025-10-13 06:27:15]  *** Contents of shared directory: ***
[2025-10-13 06:27:15] total 397248
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas 219645271 Oct 13 03:41 ATLAS.root_0
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 06:27:15] -rw-r--r--. 2 boincer umatlas    569675 Oct 13 03:41 input.tar.gz
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas 184820475 Oct 13 06:23 HITS.pool.root.1
[2025-10-13 06:27:15] -rw-------. 1 boincer umatlas   1710080 Oct 13 06:27 result.tar.gz
06:27:17 (712028): run_atlas exited; CPU time 33222.342576
06:27:17 (712028): called boinc_finish(0)

</stderr_txt>
]]>

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