Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:46:02 (950366): wrapper (7.7.26015): starting
01:46:02 (950366): wrapper: running run_atlas (--nthreads 3)
[2025-10-15 01:46:02] Arguments: --nthreads 3
[2025-10-15 01:46:02] Threads: 3
[2025-10-15 01:46:02] Checking for CVMFS
[2025-10-15 01:46:22] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-15 01:46:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-15 01:46:57] Running cvmfs_config stat atlas.cern.ch
[2025-10-15 01:46:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-15 01:46:57] 2.11.5.0 950587 0 30820 151704 3 1 13903783 15728641 0 130560 0 0 100.000 2 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.248.156:3126 1
[2025-10-15 01:46:57] CVMFS is ok
[2025-10-15 01:46:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-15 01:46:57] Checking for apptainer binary...
[2025-10-15 01:46:57] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-15 01:46:57] Running /usr/bin/apptainer --version
[2025-10-15 01:46:57] apptainer version 1.3.4-1.el9
[2025-10-15 01:46:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-15 01:46:57] testio003
[2025-10-15 01:46:57] apptainer works
[2025-10-15 01:46:57] Set ATHENA_PROC_NUMBER=3
[2025-10-15 01:46:57] Set ATHENA_CORE_NUMBER=3
[2025-10-15 01:46:57] Starting ATLAS job with PandaID=6841557508
[2025-10-15 01:46:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-15 03:43:43]  *** The last 200 lines of the pilot log: ***
[2025-10-15 03:43:43] 2025-10-14 18:42:58,108 | INFO     | monitor loop #529: job 0:6841557508 is in state 'finished'
[2025-10-15 03:43:43] 2025-10-14 18:42:58,108 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-15 03:43:43] 2025-10-14 18:42:58,896 | INFO     | time since job start (6872s) is within the limit (172800.0s)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,518 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-15 03:43:43] 2025-10-14 18:42:59,519 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 3604.9905
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6841557508/memory_monitor_summary.json (trf name=prmon)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | INFO     | extracted standard info from prmon json
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | INFO     | extracted standard memory fields from prmon json
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-15 03:43:43] 2025-10-14 18:42:59,520 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-15 03:43:43] 2025-10-14 18:42:59,521 | INFO     | fitting pss+swap vs Time
[2025-10-15 03:43:43] 2025-10-14 18:42:59,521 | INFO     | sum of square deviations: 424055782.91891795
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | sum of deviations: -9812705195.13513
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | mean x: 1760463886.0270271
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | mean y: 2432898.7117117117
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | -- intersect: 40739792972.79483
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | intersect: 40739792972.79483
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | chi2: 2.2265900309106526
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | sum of square deviations: 369292880.4150944
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | sum of deviations: -8486671593.018866
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | mean x: 1760463733.528302
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | mean y: 2436593.8396226414
[2025-10-15 03:43:43] 2025-10-14 18:42:59,522 | INFO     | -- intersect: 40459424394.63639
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | intersect: 40459424394.63639
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | chi2: 2.2270908215721534
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | current chi2=2.2270908215721534 (change=-0.02249137266172276 %)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | right removable region: 105
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | sum of square deviations: 369291050.4150944
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | sum of deviations: -30733263777.169804
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | mean x: 1760464038.528302
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | mean y: 2490437.0566037735
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | -- intersect: 146512419679.84894
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | intersect: 146512419679.84894
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | chi2: 0.22058585648119042
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | current chi2=0.22058585648119042 (change=90.09310859121322 %)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,523 | INFO     | sum of square deviations: 319456642.9108916
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | sum of deviations: -27511156263.42574
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | mean x: 1760464191.029703
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | mean y: 2480521.4752475247
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | -- intersect: 151611177758.96906
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | intersect: 151611177758.96906
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | chi2: 0.21687611343168983
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | current chi2=0.21687611343168983 (change=1.6817683185489813 %)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | left removable region: 20
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | sum of square deviations: 190411630.89411813
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | sum of deviations: -17788588067.894115
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | mean x: 1760464313.035294
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | mean y: 2458421.964705882
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | -- intersect: 164468118034.04468
[2025-10-15 03:43:43] 2025-10-14 18:42:59,524 | INFO     | intersect: 164468118034.04468
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | chi2: 0.1969840496935756
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | -- intersect: 164468118034.04468
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | current memory leak: -93.42 B/s (using 85 data points, chi2=0.20)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | could have reported an average CPU frequency of 3580 MHz (7 samples)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | ..............................
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . Timing measurements:
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . get job = 0 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . initial setup = 5 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . payload setup = 5 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . stage-in = 0 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . payload execution = 6765 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . stage-out = 0 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | . log creation = 0 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,525 | INFO     | ..............................
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | 
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | job summary report
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | --------------------------------------------------
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | PanDA job id: 6841557508
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | task id: 46676269
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | errors: (none)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | pilot state: finished 
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | transexitcode: 0
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | exeerrorcode: 0
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | exeerrordiag: 
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | exitcode: 0
[2025-10-15 03:43:43] 2025-10-14 18:42:59,817 | INFO     | exitmsg: OK
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | cpuconsumptiontime: 19156 s
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | nevents: 400
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | neventsw: 0
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | pid: 961197
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | pgrp: 961197
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | corecount: 3
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | event service: False
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | sizes: {0: 2348871, 5: 2349133, 11: 2349189, 6775: 2376363, 6777: 2385417, 6858: 2385583}
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | --------------------------------------------------
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | 
[2025-10-15 03:43:43] 2025-10-14 18:42:59,818 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-10-15 03:43:43] 2025-10-14 18:42:59,828 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,829 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-15 03:43:43] 2025-10-14 18:42:59,830 | INFO     | job 6841557508 has completed (purged errors)
[2025-10-15 03:43:43] 2025-10-14 18:42:59,830 | INFO     | overall cleanup function is called
[2025-10-15 03:43:43] 2025-10-14 18:43:00,835 | INFO     | --- collectZombieJob: --- 10, [961197]
[2025-10-15 03:43:43] 2025-10-14 18:43:00,835 | INFO     | zombie collector waiting for pid 961197
[2025-10-15 03:43:43] 2025-10-14 18:43:00,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-15 03:43:43] 2025-10-14 18:43:00,835 | INFO     | collected zombie processes
[2025-10-15 03:43:43] 2025-10-14 18:43:00,836 | INFO     | will attempt to kill all subprocesses of pid=961197
[2025-10-15 03:43:43] 2025-10-14 18:43:00,876 | INFO     | process IDs to be killed: [961197] (in reverse order)
[2025-10-15 03:43:43] 2025-10-14 18:43:00,897 | WARNING  | found no corresponding commands to process id(s)
[2025-10-15 03:43:43] 2025-10-14 18:43:00,897 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-15 03:43:43] 2025-10-14 18:43:00,898 | INFO     | did not find any defunct processes belonging to 961197
[2025-10-15 03:43:43] 2025-10-14 18:43:00,899 | INFO     | did not find any defunct processes belonging to 961197
[2025-10-15 03:43:43] 2025-10-14 18:43:00,899 | INFO     | ready for new job
[2025-10-15 03:43:43] 2025-10-14 18:43:00,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-15 03:43:43] 2025-10-14 18:43:00,900 | INFO     | ***************************************
[2025-10-15 03:43:43] 2025-10-14 18:43:00,900 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-15 03:43:43] 2025-10-14 18:43:00,901 | INFO     | ***************************************
[2025-10-15 03:43:43] 2025-10-14 18:43:00,901 | INFO     | 
[2025-10-15 03:43:43] 2025-10-14 18:43:00,912 | INFO     | architecture information:
[2025-10-15 03:43:43] 2025-10-14 18:43:00,913 | INFO     | executing command: cat /etc/os-release
[2025-10-15 03:43:43] 2025-10-14 18:43:00,921 | INFO     | cat /etc/os-release:
[2025-10-15 03:43:43] NAME="CentOS Linux"
[2025-10-15 03:43:43] VERSION="7 (Core)"
[2025-10-15 03:43:43] ID="centos"
[2025-10-15 03:43:43] ID_LIKE="rhel fedora"
[2025-10-15 03:43:43] VERSION_ID="7"
[2025-10-15 03:43:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-15 03:43:43] ANSI_COLOR="0;31"
[2025-10-15 03:43:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-15 03:43:43] HOME_URL="https://www.centos.org/"
[2025-10-15 03:43:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-15 03:43:43] 
[2025-10-15 03:43:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-15 03:43:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-15 03:43:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-15 03:43:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-15 03:43:43] 
[2025-10-15 03:43:43] 2025-10-14 18:43:00,921 | INFO     | ***************************************
[2025-10-15 03:43:43] 2025-10-14 18:43:01,423 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-10-15 03:43:43] 2025-10-14 18:43:01,432 | INFO     | sufficient remaining disk space (41895854080 B)
[2025-10-15 03:43:43] 2025-10-14 18:43:01,432 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-15 03:43:43] 2025-10-14 18:43:01,433 | INFO     | current server update state: UPDATING_FINAL
[2025-10-15 03:43:43] 2025-10-14 18:43:01,433 | INFO     | update_server=False
[2025-10-15 03:43:43] 2025-10-14 18:43:01,433 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-15 03:43:43] 2025-10-14 18:43:01,433 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-15 03:43:43] 2025-10-14 18:43:01,433 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-15 03:43:43] 2025-10-14 18:43:01,450 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-15 03:43:43] 2025-10-14 18:43:01,615 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-15 03:43:43] 2025-10-14 18:43:01,615 | INFO     | aborting loop
[2025-10-15 03:43:43] 2025-10-14 18:43:01,820 | INFO     | all data control threads have been joined
[2025-10-15 03:43:43] 2025-10-14 18:43:02,437 | INFO     | [job] retrieve thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,438 | INFO     | [job] queue monitor thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,457 | INFO     | [payload] validate_pre thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,461 | INFO     | [job] create_data_payload thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,617 | INFO     | all payload control threads have been joined
[2025-10-15 03:43:43] 2025-10-14 18:43:02,621 | INFO     | [job] job monitor thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,652 | INFO     | [payload] validate_post thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,745 | INFO     | [payload] execute_payloads thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,825 | INFO     | [data] control thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:02,908 | INFO     | all job control threads have been joined
[2025-10-15 03:43:43] 2025-10-14 18:43:03,456 | INFO     | [data] copytool_out thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:03,622 | INFO     | [payload] control thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:03,773 | INFO     | [payload] failed_post thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:03,911 | INFO     | [job] validate thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:03,913 | INFO     | [job] control thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:03,926 | INFO     | [data] copytool_in thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:05,438 | INFO     | [data] queue_monitor thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:11,716 | INFO     | job.realtimelogging is not enabled
[2025-10-15 03:43:43] 2025-10-14 18:43:12,721 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-15 03:43:43] 2025-10-14 18:43:32,010 | INFO     | PID=954670 has CPU usage=0.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-15 03:43:43] 2025-10-14 18:43:32,010 | INFO     | found 0 job(s) in 20 queues
[2025-10-15 03:43:43] 2025-10-14 18:43:32,010 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-15 03:43:43] 2025-10-14 18:43:32,010 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-15 03:43:43] 2025-10-14 18:43:37,220 | INFO     | [monitor] cgroup control has ended
[2025-10-15 03:43:43] 2025-10-14 18:43:37,976 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140297791989568)>', '<ExcThread(monitor, started 140297296135936)>']
[2025-10-15 03:43:43] 2025-10-14 18:43:38,037 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-15 03:43:43] 2025-10-14 18:43:38,037 | INFO     | [monitor] control thread has ended
[2025-10-15 03:43:43] 2025-10-14 18:43:43,001 | INFO     | all workflow threads have been joined
[2025-10-15 03:43:43] 2025-10-14 18:43:43,001 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-15 03:43:43] 2025-10-14 18:43:43,001 | INFO     | traces error code: 0
[2025-10-15 03:43:43] 2025-10-14 18:43:43,002 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-15 03:43:43] 2025-10-14 18:43:43,060 [wrapper] ==== pilot stdout END ====
[2025-10-15 03:43:43] 2025-10-14 18:43:43,062 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-15 03:43:43] 2025-10-14 18:43:43,063 [wrapper] pilotpid: 954670
[2025-10-15 03:43:43] 2025-10-14 18:43:43,065 [wrapper] Pilot exit status: 0
[2025-10-15 03:43:43] 2025-10-14 18:43:43,071 [wrapper] pandaids: 6841557508
[2025-10-15 03:43:43] 2025-10-14 18:43:43,083 [wrapper] cleanup supervisor_pilot  975341 954671
[2025-10-15 03:43:43] 2025-10-14 18:43:43,085 [wrapper] Test setup, not cleaning
[2025-10-15 03:43:43] 2025-10-14 18:43:43,087 [wrapper] apfmon messages muted
[2025-10-15 03:43:43] 2025-10-14 18:43:43,089 [wrapper] ==== wrapper stdout END ====
[2025-10-15 03:43:43] 2025-10-14 18:43:43,090 [wrapper] ==== wrapper stderr END ====
[2025-10-15 03:43:43]  *** Error codes and diagnostics ***
[2025-10-15 03:43:43]     "exeErrorCode": 0,
[2025-10-15 03:43:43]     "exeErrorDiag": "",
[2025-10-15 03:43:43]     "pilotErrorCode": 0,
[2025-10-15 03:43:43]     "pilotErrorDiag": "",
[2025-10-15 03:43:43]  *** Listing of results directory ***
[2025-10-15 03:43:43] total 408260
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc    557409 Oct 13 11:00 pilot3.tar.gz
[2025-10-15 03:43:43] -rwx------. 1 boinc boinc     36292 Oct 13 11:52 runpilot2-wrapper.sh
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc      5112 Oct 13 11:52 queuedata.json
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc       100 Oct 15 01:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-15 03:43:43] -rwxr-xr-x. 1 boinc boinc      7986 Oct 15 01:46 run_atlas
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc       105 Oct 15 01:46 job.xml
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc      9291 Oct 15 01:46 init_data.xml
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc 219293143 Oct 15 01:46 EVNT.46676267._001524.pool.root.1
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc     15120 Oct 15 01:46 start_atlas.sh
[2025-10-15 03:43:43] drwxrwx--x. 2 boinc boinc        68 Oct 15 01:46 shared
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc    569683 Oct 15 01:46 input.tar.gz
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc         0 Oct 15 01:46 boinc_lockfile
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc      2550 Oct 15 01:46 pandaJob.out
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc    973983 Oct 15 01:48 agis_schedconf.cvmfs.json
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc   1560740 Oct 15 01:48 agis_ddmendpoints.agis.ALL.json
[2025-10-15 03:43:43] drwx------. 5 boinc boinc      4096 Oct 15 01:48 pilot3
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc 192374055 Oct 15 03:41 HITS.46676269._095308.pool.root.1
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc       529 Oct 15 03:41 boinc_task_state.xml
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc      1023 Oct 15 03:41 memory_monitor_summary.json
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc    275365 Oct 15 03:41 log.46676269._095308.job.log.tgz.1
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc        95 Oct 15 03:42 pilot_heartbeat.json
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc      7764 Oct 15 03:42 heartbeat.json
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc      8192 Oct 15 03:43 boinc_mmap_file
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc        27 Oct 15 03:43 wrapper_checkpoint.txt
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc      4819 Oct 15 03:43 pilotlog.txt
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc    971925 Oct 15 03:43 log.46676269._095308.job.log.1
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc       357 Oct 15 03:43 output.list
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc       620 Oct 15 03:43 runtime_log
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc   1269760 Oct 15 03:43 result.tar.gz
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc      8661 Oct 15 03:43 runtime_log.err
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc       643 Oct 15 03:43 LUwNDmHrNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmraVMDmBHsZhm.diag
[2025-10-15 03:43:43] -rw-r--r--. 1 boinc boinc     20810 Oct 15 03:43 stderr.txt
[2025-10-15 03:43:43] HITS file was successfully produced:
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc 192374055 Oct 15 03:41 shared/HITS.pool.root.1
[2025-10-15 03:43:43]  *** Contents of shared directory: ***
[2025-10-15 03:43:43] total 403840
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc 219293143 Oct 15 01:46 ATLAS.root_0
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc     15120 Oct 15 01:46 start_atlas.sh
[2025-10-15 03:43:43] -rw-r--r--. 2 boinc boinc    569683 Oct 15 01:46 input.tar.gz
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc 192374055 Oct 15 03:41 HITS.pool.root.1
[2025-10-15 03:43:43] -rw-------. 1 boinc boinc   1269760 Oct 15 03:43 result.tar.gz
03:43:44 (950366): run_atlas exited; CPU time 19186.352547
03:43:44 (950366): called boinc_finish(0)

</stderr_txt>
]]>

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