Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:11:28 (195112): wrapper (7.7.26015): starting
05:11:28 (195112): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 05:11:28] Arguments: --nthreads 9
[2025-10-13 05:11:28] Threads: 9
[2025-10-13 05:11:28] Checking for CVMFS
[2025-10-13 05:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:11:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:11:29] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:11:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:11:29] 2.13.2.0 4117 108625 219236 151654 1 65 33044798 39288833 7302 16776704 1 93923538 99.744 54139031 31953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:11:29] CVMFS is ok
[2025-10-13 05:11:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:11:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:11:30] Further information can be found at the LHC@home message board.
[2025-10-13 05:11:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:11:30] Checking for apptainer binary...
[2025-10-13 05:11:30] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:11:30] Running /usr/bin/apptainer --version
[2025-10-13 05:11:30] apptainer version 1.4.3-1.el9
[2025-10-13 05:11:30] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:11:30] c-210-23.aglt2.org
[2025-10-13 05:11:30] apptainer works
[2025-10-13 05:11:30] Set ATHENA_PROC_NUMBER=9
[2025-10-13 05:11:30] Set ATHENA_CORE_NUMBER=9
[2025-10-13 05:11:30] Starting ATLAS job with PandaID=6841227622
[2025-10-13 05:11:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:28:18]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:28:18] 2025-10-13 12:27:24,329 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:28:18] 2025-10-13 12:27:24,334 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:28:18] 2025-10-13 12:27:24,334 | INFO     | sum of square deviations: 2194672651.25
[2025-10-13 08:28:18] 2025-10-13 12:27:24,336 | INFO     | sum of deviations: 5955224165.750008
[2025-10-13 08:28:18] 2025-10-13 12:27:24,336 | INFO     | mean x: 1760352578.5625
[2025-10-13 08:28:18] 2025-10-13 12:27:24,336 | INFO     | mean y: 2541510.0208333335
[2025-10-13 08:28:18] 2025-10-13 12:27:24,336 | INFO     | -- intersect: -4774159110.969211
[2025-10-13 08:28:18] 2025-10-13 12:27:24,336 | INFO     | intersect: -4774159110.969211
[2025-10-13 08:28:18] 2025-10-13 12:27:24,337 | INFO     | chi2: 2.208466145329549
[2025-10-13 08:28:18] 2025-10-13 12:27:24,337 | INFO     | sum of square deviations: 2027640621.2299528
[2025-10-13 08:28:18] 2025-10-13 12:27:24,338 | INFO     | sum of deviations: 18111656693.058815
[2025-10-13 08:28:18] 2025-10-13 12:27:24,338 | INFO     | mean x: 1760352426.064171
[2025-10-13 08:28:18] 2025-10-13 12:27:24,339 | INFO     | mean y: 2552372.411764706
[2025-10-13 08:28:18] 2025-10-13 12:27:24,339 | INFO     | -- intersect: -15721584570.715525
[2025-10-13 08:28:18] 2025-10-13 12:27:24,339 | INFO     | intersect: -15721584570.715525
[2025-10-13 08:28:18] 2025-10-13 12:27:24,339 | INFO     | chi2: 1.5214655223298046
[2025-10-13 08:28:18] 2025-10-13 12:27:24,339 | INFO     | current chi2=1.5214655223298046 (change=31.107591323172834 %)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,340 | INFO     | sum of square deviations: 1869295142.8351676
[2025-10-13 08:28:18] 2025-10-13 12:27:24,341 | INFO     | sum of deviations: 17780682523.999992
[2025-10-13 08:28:18] 2025-10-13 12:27:24,341 | INFO     | mean x: 1760352273.5604396
[2025-10-13 08:28:18] 2025-10-13 12:27:24,341 | INFO     | mean y: 2552053.0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,341 | INFO     | -- intersect: -16741868980.003126
[2025-10-13 08:28:18] 2025-10-13 12:27:24,342 | INFO     | intersect: -16741868980.003126
[2025-10-13 08:28:18] 2025-10-13 12:27:24,342 | INFO     | chi2: 1.5226323548932286
[2025-10-13 08:28:18] 2025-10-13 12:27:24,342 | INFO     | current chi2=1.5226323548932286 (change=-0.07669135752989144 %)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,342 | INFO     | right removable region: 181
[2025-10-13 08:28:18] 2025-10-13 12:27:24,343 | INFO     | sum of square deviations: 2027633301.2299528
[2025-10-13 08:28:18] 2025-10-13 12:27:24,344 | INFO     | sum of deviations: -23407553697.679146
[2025-10-13 08:28:18] 2025-10-13 12:27:24,344 | INFO     | mean x: 1760352731.064171
[2025-10-13 08:28:18] 2025-10-13 12:27:24,344 | INFO     | mean y: 2567994.973262032
[2025-10-13 08:28:18] 2025-10-13 12:27:24,344 | INFO     | -- intersect: 20324561648.483307
[2025-10-13 08:28:18] 2025-10-13 12:27:24,344 | INFO     | intersect: 20324561648.483307
[2025-10-13 08:28:18] 2025-10-13 12:27:24,345 | INFO     | chi2: 0.7663057061550047
[2025-10-13 08:28:18] 2025-10-13 12:27:24,345 | INFO     | current chi2=0.7663057061550047 (change=65.30145106477708 %)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,345 | INFO     | sum of square deviations: 1869291788.7087924
[2025-10-13 08:28:18] 2025-10-13 12:27:24,346 | INFO     | sum of deviations: -25884007336.428566
[2025-10-13 08:28:18] 2025-10-13 12:27:24,347 | INFO     | mean x: 1760352883.5659342
[2025-10-13 08:28:18] 2025-10-13 12:27:24,347 | INFO     | mean y: 2570321.285714286
[2025-10-13 08:28:18] 2025-10-13 12:27:24,347 | INFO     | -- intersect: 24378105070.94494
[2025-10-13 08:28:18] 2025-10-13 12:27:24,347 | INFO     | intersect: 24378105070.94494
[2025-10-13 08:28:18] 2025-10-13 12:27:24,347 | INFO     | chi2: 0.7282610905167783
[2025-10-13 08:28:18] 2025-10-13 12:27:24,348 | INFO     | current chi2=0.7282610905167783 (change=4.9646786305582955 %)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,348 | INFO     | left removable region: 20
[2025-10-13 08:28:18] 2025-10-13 12:27:24,348 | INFO     | sum of square deviations: 1293995328.2484443
[2025-10-13 08:28:18] 2025-10-13 12:27:24,349 | INFO     | sum of deviations: -10542413329.000008
[2025-10-13 08:28:18] 2025-10-13 12:27:24,349 | INFO     | mean x: 1760352853.068323
[2025-10-13 08:28:18] 2025-10-13 12:27:24,349 | INFO     | mean y: 2580328.0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,349 | INFO     | -- intersect: 14344492525.667156
[2025-10-13 08:28:18] 2025-10-13 12:27:24,349 | INFO     | intersect: 14344492525.667156
[2025-10-13 08:28:18] 2025-10-13 12:27:24,350 | INFO     | chi2: 0.02027606373955583
[2025-10-13 08:28:18] 2025-10-13 12:27:24,350 | INFO     | -- intersect: 14344492525.667156
[2025-10-13 08:28:18] 2025-10-13 12:27:24,350 | INFO     | current memory leak: -8.15 B/s (using 161 data points, chi2=0.02)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | could have reported an average CPU frequency of 2595 MHz (10 samples)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | ..............................
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | . Timing measurements:
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | . get job = 0 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | . initial setup = 3 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,351 | INFO     | . payload setup = 10 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,352 | INFO     | . stage-in = 0 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,352 | INFO     | . payload execution = 11682 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,352 | INFO     | . stage-out = 2 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,352 | INFO     | . log creation = 0 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,352 | INFO     | ..............................
[2025-10-13 08:28:18] 2025-10-13 12:27:24,372 | INFO     | time since job start (11733s) is within the limit (172800.0s)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,483 | INFO     | 
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | job summary report
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | --------------------------------------------------
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | PanDA job id: 6841227622
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | task id: 46676269
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | errors: (none)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | pilot state: finished 
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | transexitcode: 0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,490 | INFO     | exeerrorcode: 0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | exeerrordiag: 
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | exitcode: 0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | exitmsg: OK
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | cpuconsumptiontime: 50685 s
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | nevents: 400
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | neventsw: 0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | pid: 205337
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | pgrp: 205337
[2025-10-13 08:28:18] 2025-10-13 12:27:24,491 | INFO     | corecount: 9
[2025-10-13 08:28:18] 2025-10-13 12:27:24,492 | INFO     | event service: False
[2025-10-13 08:28:18] 2025-10-13 12:27:24,492 | INFO     | sizes: {0: 2348580, 1: 2348664, 2: 2348863, 11: 2349125, 13: 2349153, 11697: 2378764, 11700: 2387762, 11703: 2387818, 11712: 2388012}
[2025-10-13 08:28:18] 2025-10-13 12:27:24,492 | INFO     | --------------------------------------------------
[2025-10-13 08:28:18] 2025-10-13 12:27:24,492 | INFO     | 
[2025-10-13 08:28:18] 2025-10-13 12:27:24,492 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 08:28:18] 2025-10-13 12:27:24,553 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,554 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,554 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,554 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,554 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,554 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:28:18] 2025-10-13 12:27:24,556 | INFO     | job 6841227622 has completed (purged errors)
[2025-10-13 08:28:18] 2025-10-13 12:27:24,557 | INFO     | overall cleanup function is called
[2025-10-13 08:28:18] 2025-10-13 12:27:25,566 | INFO     | --- collectZombieJob: --- 10, [205337]
[2025-10-13 08:28:18] 2025-10-13 12:27:25,567 | INFO     | zombie collector waiting for pid 205337
[2025-10-13 08:28:18] 2025-10-13 12:27:25,567 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:28:18] 2025-10-13 12:27:25,567 | INFO     | collected zombie processes
[2025-10-13 08:28:18] 2025-10-13 12:27:25,567 | INFO     | will attempt to kill all subprocesses of pid=205337
[2025-10-13 08:28:18] 2025-10-13 12:27:25,839 | INFO     | process IDs to be killed: [205337] (in reverse order)
[2025-10-13 08:28:18] 2025-10-13 12:27:25,945 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:28:18] 2025-10-13 12:27:25,945 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:28:18] 2025-10-13 12:27:25,953 | INFO     | did not find any defunct processes belonging to 205337
[2025-10-13 08:28:18] 2025-10-13 12:27:25,962 | INFO     | did not find any defunct processes belonging to 205337
[2025-10-13 08:28:18] 2025-10-13 12:27:25,962 | INFO     | ready for new job
[2025-10-13 08:28:18] 2025-10-13 12:27:25,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:28:18] 2025-10-13 12:27:25,966 | INFO     | ***************************************
[2025-10-13 08:28:18] 2025-10-13 12:27:25,966 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:28:18] 2025-10-13 12:27:25,966 | INFO     | ***************************************
[2025-10-13 08:28:18] 2025-10-13 12:27:25,966 | INFO     | 
[2025-10-13 08:28:18] 2025-10-13 12:27:25,995 | INFO     | architecture information:
[2025-10-13 08:28:18] 2025-10-13 12:27:25,996 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:28:18] 2025-10-13 12:27:26,061 | INFO     | cat /etc/os-release:
[2025-10-13 08:28:18] NAME="CentOS Linux"
[2025-10-13 08:28:18] VERSION="7 (Core)"
[2025-10-13 08:28:18] ID="centos"
[2025-10-13 08:28:18] ID_LIKE="rhel fedora"
[2025-10-13 08:28:18] VERSION_ID="7"
[2025-10-13 08:28:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:28:18] ANSI_COLOR="0;31"
[2025-10-13 08:28:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:28:18] HOME_URL="https://www.centos.org/"
[2025-10-13 08:28:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:28:18] 
[2025-10-13 08:28:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:28:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:28:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:28:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:28:18] 
[2025-10-13 08:28:18] 2025-10-13 12:27:26,061 | INFO     | ***************************************
[2025-10-13 08:28:18] 2025-10-13 12:27:26,565 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 08:28:18] 2025-10-13 12:27:26,655 | INFO     | sufficient remaining disk space (53228863488 B)
[2025-10-13 08:28:18] 2025-10-13 12:27:26,655 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:28:18] 2025-10-13 12:27:26,656 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:28:18] 2025-10-13 12:27:26,656 | INFO     | update_server=False
[2025-10-13 08:28:18] 2025-10-13 12:27:26,656 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:28:18] 2025-10-13 12:27:26,656 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:28:18] 2025-10-13 12:27:26,657 | INFO     | aborting loop
[2025-10-13 08:28:18] 2025-10-13 12:27:26,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:28:18] 2025-10-13 12:27:26,901 | INFO     | all data control threads have been joined
[2025-10-13 08:28:18] 2025-10-13 12:27:27,277 | INFO     | all job control threads have been joined
[2025-10-13 08:28:18] 2025-10-13 12:27:27,570 | INFO     | all payload control threads have been joined
[2025-10-13 08:28:18] 2025-10-13 12:27:27,662 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:27,663 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:27,722 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:27,847 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:28:18] 2025-10-13 12:27:27,907 | INFO     | [data] control thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,179 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,283 | INFO     | [job] control thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,340 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,500 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,576 | INFO     | [payload] control thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,681 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,758 | INFO     | [job] validate thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:28,802 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:29,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:28:18] 2025-10-13 12:27:29,853 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:30,506 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:30,672 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:37,129 | INFO     | job.realtimelogging is not enabled
[2025-10-13 08:28:18] 2025-10-13 12:27:38,134 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:28:18] 2025-10-13 12:27:57,673 | INFO     | PID=198902 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 08:28:18] 2025-10-13 12:27:57,673 | INFO     | .. there are 7 such processes running
[2025-10-13 08:28:18] 2025-10-13 12:27:57,674 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:28:18] 2025-10-13 12:27:57,674 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:28:18] 2025-10-13 12:27:57,674 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:28:18] 2025-10-13 12:28:11,481 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:28:18] 2025-10-13 12:28:13,292 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140161843095360)>', '<ExcThread(monitor, started 140160754775808)>']
[2025-10-13 08:28:18] 2025-10-13 12:28:13,751 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:28:18] 2025-10-13 12:28:13,752 | INFO     | [monitor] control thread has ended
[2025-10-13 08:28:18] 2025-10-13 12:28:18,317 | INFO     | all workflow threads have been joined
[2025-10-13 08:28:18] 2025-10-13 12:28:18,318 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:28:18] 2025-10-13 12:28:18,318 | INFO     | traces error code: 0
[2025-10-13 08:28:18] 2025-10-13 12:28:18,319 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:28:18] 2025-10-13 12:28:18,470 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:28:18] 2025-10-13 12:28:18,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:28:18] 2025-10-13 12:28:18,480 [wrapper] pilotpid: 198902
[2025-10-13 08:28:18] 2025-10-13 12:28:18,484 [wrapper] Pilot exit status: 0
[2025-10-13 08:28:18] 2025-10-13 12:28:18,500 [wrapper] pandaids: 6841227622
[2025-10-13 08:28:18] 2025-10-13 12:28:18,557 [wrapper] cleanup supervisor_pilot  510478 198903
[2025-10-13 08:28:18] 2025-10-13 12:28:18,561 [wrapper] Test setup, not cleaning
[2025-10-13 08:28:18] 2025-10-13 12:28:18,566 [wrapper] apfmon messages muted
[2025-10-13 08:28:18] 2025-10-13 12:28:18,570 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:28:18] 2025-10-13 12:28:18,574 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:28:18]  *** Error codes and diagnostics ***
[2025-10-13 08:28:18]     "exeErrorCode": 0,
[2025-10-13 08:28:18]     "exeErrorDiag": "",
[2025-10-13 08:28:18]     "pilotErrorCode": 0,
[2025-10-13 08:28:18]     "pilotErrorDiag": "",
[2025-10-13 08:28:18]  *** Listing of results directory ***
[2025-10-13 08:28:18] total 404684
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 08:28:18] -rwx------. 1 boincer umatlas     36292 Oct 12 22:23 runpilot2-wrapper.sh
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 22:23 queuedata.json
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas       100 Oct 13 05:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:28:18] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 05:11 run_atlas
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas       105 Oct 13 05:11 job.xml
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas 217938681 Oct 13 05:11 EVNT.46676267._002090.pool.root.1
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:11 start_atlas.sh
[2025-10-13 08:28:18] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 05:11 shared
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 05:11 input.tar.gz
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas         0 Oct 13 05:11 boinc_lockfile
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 05:11 pandaJob.out
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas    972857 Oct 13 05:11 agis_schedconf.cvmfs.json
[2025-10-13 08:28:18] drwx------. 5 boincer umatlas      4096 Oct 13 05:11 pilot3
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas 188379335 Oct 13 08:26 HITS.46676269._094888.pool.root.1
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas       531 Oct 13 08:26 boinc_task_state.xml
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas      1045 Oct 13 08:27 memory_monitor_summary.json
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas   1560580 Oct 13 08:27 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas    456403 Oct 13 08:27 log.46676269._094888.job.log.tgz.1
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas      7833 Oct 13 08:27 heartbeat.json
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas      6661 Oct 13 08:27 init_data.xml
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas        95 Oct 13 08:27 pilot_heartbeat.json
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 08:28 boinc_mmap_file
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas        28 Oct 13 08:28 wrapper_checkpoint.txt
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas      4894 Oct 13 08:28 pilotlog.txt
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas   1630672 Oct 13 08:28 log.46676269._094888.job.log.1
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas       357 Oct 13 08:28 output.list
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas       620 Oct 13 08:28 runtime_log
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas   2109440 Oct 13 08:28 result.tar.gz
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas       655 Oct 13 08:28 IM2MDmdONS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4WVMDmw4Nqfm.diag
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas      8704 Oct 13 08:28 runtime_log.err
[2025-10-13 08:28:18] -rw-r--r--. 1 boincer umatlas     20984 Oct 13 08:28 stderr.txt
[2025-10-13 08:28:18] HITS file was successfully produced:
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas 188379335 Oct 13 08:26 shared/HITS.pool.root.1
[2025-10-13 08:28:18]  *** Contents of shared directory: ***
[2025-10-13 08:28:18] total 399440
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas 217938681 Oct 13 05:11 ATLAS.root_0
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 05:11 start_atlas.sh
[2025-10-13 08:28:18] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 05:11 input.tar.gz
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas 188379335 Oct 13 08:26 HITS.pool.root.1
[2025-10-13 08:28:18] -rw-------. 1 boincer umatlas   2109440 Oct 13 08:28 result.tar.gz
08:28:41 (195112): run_atlas exited; CPU time 50848.589832
08:28:41 (195112): called boinc_finish(0)

</stderr_txt>
]]>

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