Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
10:10:55 (3136697): wrapper (7.7.26015): starting
10:10:55 (3136697): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 10:10:55] Arguments: --nthreads 9
[2025-10-13 10:10:55] Threads: 9
[2025-10-13 10:10:55] Checking for CVMFS
[2025-10-13 10:10:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:10:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:10:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:10:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:10:56] 2.13.2.0 5026 7222 122640 151663 3 138 34862329 40960001 21330 16776704 0 24515729 99.763 14548124 34611 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 10:10:56] CVMFS is ok
[2025-10-13 10:10:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:10:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:10:56] Further information can be found at the LHC@home message board.
[2025-10-13 10:10:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:10:56] Checking for apptainer binary...
[2025-10-13 10:10:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:10:56] Running /usr/bin/apptainer --version
[2025-10-13 10:10:56] apptainer version 1.4.3-1.el9
[2025-10-13 10:10:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:10:56] c-212-7.aglt2.org
[2025-10-13 10:10:56] apptainer works
[2025-10-13 10:10:56] Set ATHENA_PROC_NUMBER=9
[2025-10-13 10:10:56] Set ATHENA_CORE_NUMBER=9
[2025-10-13 10:10:56] Starting ATLAS job with PandaID=6840969817
[2025-10-13 10:10:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:25:34]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:25:34] 2025-10-13 16:24:30,958 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:25:34] 2025-10-13 16:24:30,958 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:25:34] 2025-10-13 16:24:30,961 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:25:34] 2025-10-13 16:24:30,963 | INFO     | sum of square deviations: 697050057.5114506
[2025-10-13 12:25:34] 2025-10-13 16:24:30,967 | INFO     | sum of deviations: 52670511.45037651
[2025-10-13 12:25:34] 2025-10-13 16:24:30,968 | INFO     | mean x: 1760368672.0610688
[2025-10-13 12:25:34] 2025-10-13 16:24:30,968 | INFO     | mean y: 2593897.0687022903
[2025-10-13 12:25:34] 2025-10-13 16:24:30,968 | INFO     | -- intersect: -130423118.42326398
[2025-10-13 12:25:34] 2025-10-13 16:24:30,968 | INFO     | intersect: -130423118.42326398
[2025-10-13 12:25:34] 2025-10-13 16:24:30,968 | INFO     | chi2: 2.1698288532762144
[2025-10-13 12:25:34] 2025-10-13 16:24:30,969 | INFO     | sum of square deviations: 620241754.992063
[2025-10-13 12:25:34] 2025-10-13 16:24:30,969 | INFO     | sum of deviations: 9074471658.269861
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | mean x: 1760368519.563492
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | mean y: 2611293.8412698414
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | -- intersect: -25752530326.854355
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | intersect: -25752530326.854355
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | chi2: 1.484109733909239
[2025-10-13 12:25:34] 2025-10-13 16:24:30,970 | INFO     | current chi2=1.484109733909239 (change=31.60245188608361 %)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,972 | INFO     | sum of square deviations: 549294027.4710754
[2025-10-13 12:25:34] 2025-10-13 16:24:30,972 | INFO     | sum of deviations: 9456128098.80165
[2025-10-13 12:25:34] 2025-10-13 16:24:30,972 | INFO     | mean x: 1760368367.0661156
[2025-10-13 12:25:34] 2025-10-13 16:24:30,972 | INFO     | mean y: 2612110.0247933883
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | -- intersect: -30302230010.131027
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | intersect: -30302230010.131027
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | chi2: 1.485638855127113
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | current chi2=1.485638855127113 (change=-0.10303289459911096 %)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | right removable region: 120
[2025-10-13 12:25:34] 2025-10-13 16:24:30,973 | INFO     | sum of square deviations: 620236874.992063
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | sum of deviations: -20861453914.746033
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | mean x: 1760368824.563492
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | mean y: 2634795.9682539683
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | -- intersect: 59212034603.1901
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | intersect: 59212034603.1901
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | chi2: 0.7419754955233745
[2025-10-13 12:25:34] 2025-10-13 16:24:30,974 | INFO     | current chi2=0.7419754955233745 (change=65.80488390118562 %)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,975 | INFO     | sum of square deviations: 549284267.4710754
[2025-10-13 12:25:34] 2025-10-13 16:24:30,975 | INFO     | sum of deviations: -20952615893.561985
[2025-10-13 12:25:34] 2025-10-13 16:24:30,975 | INFO     | mean x: 1760368977.0661156
[2025-10-13 12:25:34] 2025-10-13 16:24:30,975 | INFO     | mean y: 2634953.5702479337
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | -- intersect: 67152446429.55837
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | intersect: 67152446429.55837
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | chi2: 0.7331331071662017
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | current chi2=0.7331331071662017 (change=1.1917359010536497 %)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | left removable region: 20
[2025-10-13 12:25:34] 2025-10-13 16:24:30,976 | INFO     | sum of square deviations: 310043060.3600001
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | sum of deviations: -9281910028.04
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | mean x: 1760368946.58
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | mean y: 2655213.38
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | -- intersect: 52703677320.88578
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | intersect: 52703677320.88578
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | chi2: 0.018414402708930647
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | -- intersect: 52703677320.88578
[2025-10-13 12:25:34] 2025-10-13 16:24:30,977 | INFO     | current memory leak: -29.94 B/s (using 100 data points, chi2=0.02)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | could have reported an average CPU frequency of 2969 MHz (8 samples)
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | ..............................
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | . Timing measurements:
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | . get job = 0 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | . initial setup = 2 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,978 | INFO     | . payload setup = 8 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,979 | INFO     | . stage-in = 0 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,979 | INFO     | . payload execution = 7954 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,979 | INFO     | . stage-out = 1 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,979 | INFO     | . log creation = 0 s
[2025-10-13 12:25:34] 2025-10-13 16:24:30,979 | INFO     | ..............................
[2025-10-13 12:25:34] 2025-10-13 16:24:31,074 | INFO     | 
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | job summary report
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | --------------------------------------------------
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | PanDA job id: 6840969817
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | task id: 46676269
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | errors: (none)
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | pilot state: finished 
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | transexitcode: 0
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | exeerrorcode: 0
[2025-10-13 12:25:34] 2025-10-13 16:24:31,075 | INFO     | exeerrordiag: 
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | exitcode: 0
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | exitmsg: OK
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | cpuconsumptiontime: 37801 s
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | nevents: 400
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | neventsw: 0
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | pid: 3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | pgrp: 3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | corecount: 9
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | event service: False
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | sizes: {0: 2348685, 1: 2348884, 8: 2349146, 11: 2349174, 7966: 2377001, 7968: 2386183, 7979: 2386321}
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | --------------------------------------------------
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | 
[2025-10-13 12:25:34] 2025-10-13 16:24:31,076 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 12:25:34] 2025-10-13 16:24:31,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,114 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,114 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,114 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:25:34] 2025-10-13 16:24:31,115 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:25:34] 2025-10-13 16:24:31,116 | INFO     | job 6840969817 has completed (purged errors)
[2025-10-13 12:25:34] 2025-10-13 16:24:31,116 | INFO     | overall cleanup function is called
[2025-10-13 12:25:34] 2025-10-13 16:24:32,129 | INFO     | --- collectZombieJob: --- 10, [3149545]
[2025-10-13 12:25:34] 2025-10-13 16:24:32,130 | INFO     | zombie collector waiting for pid 3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:32,130 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:25:34] 2025-10-13 16:24:32,130 | INFO     | collected zombie processes
[2025-10-13 12:25:34] 2025-10-13 16:24:32,130 | INFO     | will attempt to kill all subprocesses of pid=3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:32,720 | INFO     | process IDs to be killed: [3149545] (in reverse order)
[2025-10-13 12:25:34] 2025-10-13 16:24:32,879 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:25:34] 2025-10-13 16:24:32,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:25:34] 2025-10-13 16:24:32,898 | INFO     | did not find any defunct processes belonging to 3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:32,919 | INFO     | did not find any defunct processes belonging to 3149545
[2025-10-13 12:25:34] 2025-10-13 16:24:32,920 | INFO     | ready for new job
[2025-10-13 12:25:34] 2025-10-13 16:24:32,920 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:25:34] 2025-10-13 16:24:32,924 | INFO     | ***************************************
[2025-10-13 12:25:34] 2025-10-13 16:24:32,924 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:25:34] 2025-10-13 16:24:32,925 | INFO     | ***************************************
[2025-10-13 12:25:34] 2025-10-13 16:24:32,925 | INFO     | 
[2025-10-13 12:25:34] 2025-10-13 16:24:32,947 | INFO     | architecture information:
[2025-10-13 12:25:34] 2025-10-13 16:24:32,948 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:25:34] 2025-10-13 16:24:32,977 | INFO     | cat /etc/os-release:
[2025-10-13 12:25:34] NAME="CentOS Linux"
[2025-10-13 12:25:34] VERSION="7 (Core)"
[2025-10-13 12:25:34] ID="centos"
[2025-10-13 12:25:34] ID_LIKE="rhel fedora"
[2025-10-13 12:25:34] VERSION_ID="7"
[2025-10-13 12:25:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:25:34] ANSI_COLOR="0;31"
[2025-10-13 12:25:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:25:34] HOME_URL="https://www.centos.org/"
[2025-10-13 12:25:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:25:34] 
[2025-10-13 12:25:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:25:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:25:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:25:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:25:34] 
[2025-10-13 12:25:34] 2025-10-13 16:24:32,978 | INFO     | ***************************************
[2025-10-13 12:25:34] 2025-10-13 16:24:33,480 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 12:25:34] 2025-10-13 16:24:33,505 | INFO     | sufficient remaining disk space (127545638912 B)
[2025-10-13 12:25:34] 2025-10-13 16:24:33,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:25:34] 2025-10-13 16:24:33,506 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:25:34] 2025-10-13 16:24:33,506 | INFO     | update_server=False
[2025-10-13 12:25:34] 2025-10-13 16:24:33,506 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:25:34] 2025-10-13 16:24:33,989 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:25:34] 2025-10-13 16:24:33,990 | INFO     | aborting loop
[2025-10-13 12:25:34] 2025-10-13 16:24:34,320 | INFO     | all data control threads have been joined
[2025-10-13 12:25:34] 2025-10-13 16:24:34,513 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:34,538 | INFO     | all payload control threads have been joined
[2025-10-13 12:25:34] 2025-10-13 16:24:34,604 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:25:34] 2025-10-13 16:24:34,811 | INFO     | all job control threads have been joined
[2025-10-13 12:25:34] 2025-10-13 16:24:34,973 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:25:34] 2025-10-13 16:24:34,996 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,077 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,288 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,327 | INFO     | [data] control thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,371 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,545 | INFO     | [payload] control thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,778 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,814 | INFO     | [job] validate thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,819 | INFO     | [job] control thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,828 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:35,846 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:36,087 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:25:34] 2025-10-13 16:24:36,980 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:37,094 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:38,613 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:24:43,885 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:25:34] 2025-10-13 16:24:44,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:25:34] 2025-10-13 16:25:03,538 | INFO     | PID=3142843 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 12:25:34] 2025-10-13 16:25:03,539 | INFO     | .. there are 22 such processes running
[2025-10-13 12:25:34] 2025-10-13 16:25:03,541 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:25:34] 2025-10-13 16:25:03,541 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:25:34] 2025-10-13 16:25:03,541 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:25:34] 2025-10-13 16:25:27,070 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:25:34] 2025-10-13 16:25:28,470 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140152854558528)>', '<ExcThread(monitor, started 140152206771968)>']
[2025-10-13 12:25:34] 2025-10-13 16:25:28,682 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:25:34] 2025-10-13 16:25:28,683 | INFO     | [monitor] control thread has ended
[2025-10-13 12:25:34] 2025-10-13 16:25:33,497 | INFO     | all workflow threads have been joined
[2025-10-13 12:25:34] 2025-10-13 16:25:33,497 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:25:34] 2025-10-13 16:25:33,498 | INFO     | traces error code: 0
[2025-10-13 12:25:34] 2025-10-13 16:25:33,498 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:25:34] 2025-10-13 16:25:33,921 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:25:34] 2025-10-13 16:25:33,932 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:25:34] 2025-10-13 16:25:33,937 [wrapper] pilotpid: 3142843
[2025-10-13 12:25:34] 2025-10-13 16:25:33,941 [wrapper] Pilot exit status: 0
[2025-10-13 12:25:34] 2025-10-13 16:25:34,016 [wrapper] pandaids: 6840969817
[2025-10-13 12:25:34] 2025-10-13 16:25:34,160 [wrapper] cleanup supervisor_pilot 3420098 3142844
[2025-10-13 12:25:34] 2025-10-13 16:25:34,203 [wrapper] Test setup, not cleaning
[2025-10-13 12:25:34] 2025-10-13 16:25:34,211 [wrapper] apfmon messages muted
[2025-10-13 12:25:34] 2025-10-13 16:25:34,214 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:25:34] 2025-10-13 16:25:34,217 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:25:34]  *** Error codes and diagnostics ***
[2025-10-13 12:25:34]     "exeErrorCode": 0,
[2025-10-13 12:25:34]     "exeErrorDiag": "",
[2025-10-13 12:25:34]     "pilotErrorCode": 0,
[2025-10-13 12:25:34]     "pilotErrorDiag": "",
[2025-10-13 12:25:34]  *** Listing of results directory ***
[2025-10-13 12:25:34] total 414028
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 19:53 queuedata.json
[2025-10-13 12:25:34] -rwx------. 1 boincer umatlas     36292 Oct 12 19:54 runpilot2-wrapper.sh
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas       100 Oct 13 10:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:25:34] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 10:10 run_atlas
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas       105 Oct 13 10:10 job.xml
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas 223538270 Oct 13 10:10 EVNT.46676267._004669.pool.root.1
[2025-10-13 12:25:34] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 10:10 shared
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 10:10 input.tar.gz
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 10:10 start_atlas.sh
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas         0 Oct 13 10:10 boinc_lockfile
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 10:10 pandaJob.out
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas    972489 Oct 13 10:11 agis_schedconf.cvmfs.json
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas   1560580 Oct 13 10:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:25:34] drwx------. 5 boincer umatlas      4096 Oct 13 10:11 pilot3
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 12:22 init_data.xml
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas 193552603 Oct 13 12:23 HITS.46676269._092501.pool.root.1
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas       530 Oct 13 12:23 boinc_task_state.xml
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas      1046 Oct 13 12:24 memory_monitor_summary.json
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas    386638 Oct 13 12:24 log.46676269._092501.job.log.tgz.1
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas      7798 Oct 13 12:24 heartbeat.json
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas        95 Oct 13 12:25 pilot_heartbeat.json
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas        27 Oct 13 12:25 wrapper_checkpoint.txt
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas      4897 Oct 13 12:25 pilotlog.txt
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas   1099868 Oct 13 12:25 log.46676269._092501.job.log.1
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas       357 Oct 13 12:25 output.list
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas       620 Oct 13 12:25 runtime_log
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas   1505280 Oct 13 12:25 result.tar.gz
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 12:25 runtime_log.err
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas       656 Oct 13 12:25 DE9KDmn4KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmN6lNDmZy8CYo.diag
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas     20936 Oct 13 12:25 stderr.txt
[2025-10-13 12:25:34] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 12:25 boinc_mmap_file
[2025-10-13 12:25:34] HITS file was successfully produced:
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas 193552603 Oct 13 12:23 shared/HITS.pool.root.1
[2025-10-13 12:25:34]  *** Contents of shared directory: ***
[2025-10-13 12:25:34] total 409372
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas 223538270 Oct 13 10:10 ATLAS.root_0
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas    569681 Oct 13 10:10 input.tar.gz
[2025-10-13 12:25:34] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 10:10 start_atlas.sh
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas 193552603 Oct 13 12:23 HITS.pool.root.1
[2025-10-13 12:25:34] -rw-------. 1 boincer umatlas   1505280 Oct 13 12:25 result.tar.gz
12:25:35 (3136697): run_atlas exited; CPU time 37995.580207
12:25:35 (3136697): called boinc_finish(0)

</stderr_txt>
]]>

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