Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
03:11:37 (23712): wrapper (7.7.26015): starting
03:11:37 (23712): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 03:11:37] Arguments: --nthreads 12
[2025-10-13 03:11:37] Threads: 12
[2025-10-13 03:11:37] Checking for CVMFS
[2025-10-13 03:11:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:11:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:11:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:11:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:11:38] 2.11.2.0 3103 13980 86124 151652 0 57 11724038 20275201 1 130560 0 14617926 99.993 467401 46336 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:11:38] CVMFS is ok
[2025-10-13 03:11:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:11:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:11:38] Further information can be found at the LHC@home message board.
[2025-10-13 03:11:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:11:38] Checking for apptainer binary...
[2025-10-13 03:11:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:11:38] Running /usr/bin/apptainer --version
[2025-10-13 03:11:38] apptainer version 1.3.2-1.el7
[2025-10-13 03:11:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:11:39] c-115-41.aglt2.org
[2025-10-13 03:11:39] apptainer works
[2025-10-13 03:11:39] Set ATHENA_PROC_NUMBER=12
[2025-10-13 03:11:39] Set ATHENA_CORE_NUMBER=12
[2025-10-13 03:11:39] Starting ATLAS job with PandaID=6841294566
[2025-10-13 03:11:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:20:06]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:20:06]  lfn=log.46676269._094996.job.log.tgz.1
[2025-10-13 04:20:06]  mtime=0
[2025-10-13 04:20:06]  protocol_id=None
[2025-10-13 04:20:06]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-13 04:20:06]  replicas=None
[2025-10-13 04:20:06]  scope=mc23_13p6TeV
[2025-10-13 04:20:06]  status=None
[2025-10-13 04:20:06]  status_code=0
[2025-10-13 04:20:06]  storage_token=
[2025-10-13 04:20:06]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841294566/log.46676269._094996.job.log.tgz.1
[2025-10-13 04:20:06]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/75/log.46676269._094996.job.log.tgz.1
[2025-10-13 04:20:06]  workdir=None
[2025-10-13 04:20:06] ]
[2025-10-13 04:20:06] 2025-10-13 08:18:58,594 | INFO     | transferring file log.46676269._094996.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841294566/log.46676269._094996.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 04:20:06] 2025-10-13 08:18:58,594 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841294566/log.46676269._094996.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._094996.job
[2025-10-13 04:20:06] 2025-10-13 08:18:58,616 | INFO     | adding to output.list: log.46676269._094996.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/bd/75/log.46676269._094996.job.log.tg
[2025-10-13 04:20:06] 2025-10-13 08:18:58,617 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:20:06] 2025-10-13 08:18:58,617 | INFO     | summary of transferred files:
[2025-10-13 04:20:06] 2025-10-13 08:18:58,617 | INFO     |  -- lfn=log.46676269._094996.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:20:06] 2025-10-13 08:18:58,617 | INFO     | stage-out finished correctly
[2025-10-13 04:20:06] 2025-10-13 08:18:58,694 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:20:06] 2025-10-13 08:18:58,833 | INFO     | job 6841294566 has state=finished
[2025-10-13 04:20:06] 2025-10-13 08:18:58,833 | INFO     | preparing for final server update for job 6841294566 in state='finished'
[2025-10-13 04:20:06] 2025-10-13 08:18:58,834 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:20:06] 2025-10-13 08:18:58,834 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:20:06] 2025-10-13 08:18:58,834 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:20:06] 2025-10-13 08:18:58,834 | INFO     | job 6841294566 has finished - writing final server update
[2025-10-13 04:20:06] 2025-10-13 08:18:58,835 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:20:06] 2025-10-13 08:18:58,836 | INFO     | executing command: lscpu
[2025-10-13 04:20:06] 2025-10-13 08:18:58,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:20:06] 2025-10-13 08:19:00,402 | INFO     | time since job start (4026s) is within the limit (172800.0s)
[2025-10-13 04:20:06] 2025-10-13 08:19:00,799 | INFO     | monitor loop #302: job 0:6841294566 is in state 'finished'
[2025-10-13 04:20:06] 2025-10-13 08:19:00,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:20:06] 2025-10-13 08:19:02,407 | INFO     | time since job start (4028s) is within the limit (172800.0s)
[2025-10-13 04:20:06] 2025-10-13 08:19:03,308 | INFO     | monitor loop #303: job 0:6841294566 is in state 'finished'
[2025-10-13 04:20:06] 2025-10-13 08:19:03,308 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,413 | INFO     | time since job start (4030s) is within the limit (172800.0s)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,678 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 04:20:06] 2025-10-13 08:19:04,682 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1717.9166666666667
[2025-10-13 04:20:06] 2025-10-13 08:19:04,685 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841294566/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,686 | INFO     | extracted standard info from prmon json
[2025-10-13 04:20:06] 2025-10-13 08:19:04,686 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:20:06] 2025-10-13 08:19:04,686 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:20:06] 2025-10-13 08:19:04,687 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:20:06] 2025-10-13 08:19:04,687 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:20:06] 2025-10-13 08:19:04,689 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:20:06] 2025-10-13 08:19:04,689 | INFO     | sum of square deviations: 63666310.0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | sum of deviations: 1383164752.0000002
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | mean x: 1760341616.0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | mean y: 2749870.2881355933
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | -- intersect: -38241063454.68577
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | intersect: -38241063454.68577
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | chi2: 0.0022003730876930796
[2025-10-13 04:20:06] 2025-10-13 08:19:04,690 | INFO     | -- intersect: -38241063454.68577
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | current memory leak: 21.73 B/s (using 59 data points, chi2=0.00)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | could have reported an average CPU frequency of 2144 MHz (6 samples)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | ..............................
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | . Timing measurements:
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | . get job = 0 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | . initial setup = 2 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | . payload setup = 6 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,691 | INFO     | . stage-in = 0 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,692 | INFO     | . payload execution = 3996 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,692 | INFO     | . stage-out = 0 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,692 | INFO     | . log creation = 0 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,692 | INFO     | ..............................
[2025-10-13 04:20:06] 2025-10-13 08:19:04,767 | INFO     | 
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | job summary report
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | --------------------------------------------------
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | PanDA job id: 6841294566
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | task id: 46676269
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | errors: (none)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | pilot state: finished 
[2025-10-13 04:20:06] 2025-10-13 08:19:04,768 | INFO     | transexitcode: 0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | exeerrorcode: 0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | exeerrordiag: 
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | exitcode: 0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | exitmsg: OK
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | cpuconsumptiontime: 42430 s
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | nevents: 400
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | neventsw: 0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | pid: 2116
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | pgrp: 2116
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | corecount: 12
[2025-10-13 04:20:06] 2025-10-13 08:19:04,769 | INFO     | event service: False
[2025-10-13 04:20:06] 2025-10-13 08:19:04,770 | INFO     | sizes: {0: 2347928, 1: 2348784, 6: 2349046, 12: 2349074, 4007: 2374914, 4009: 2384096, 4015: 2384234}
[2025-10-13 04:20:06] 2025-10-13 08:19:04,770 | INFO     | --------------------------------------------------
[2025-10-13 04:20:06] 2025-10-13 08:19:04,770 | INFO     | 
[2025-10-13 04:20:06] 2025-10-13 08:19:04,770 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:20:06] 2025-10-13 08:19:04,795 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,796 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,797 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,798 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,799 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:20:06] 2025-10-13 08:19:04,799 | INFO     | job 6841294566 has completed (purged errors)
[2025-10-13 04:20:06] 2025-10-13 08:19:04,799 | INFO     | overall cleanup function is called
[2025-10-13 04:20:06] 2025-10-13 08:19:05,806 | INFO     | --- collectZombieJob: --- 10, [2116]
[2025-10-13 04:20:06] 2025-10-13 08:19:05,806 | INFO     | zombie collector waiting for pid 2116
[2025-10-13 04:20:06] 2025-10-13 08:19:05,813 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:20:06] 2025-10-13 08:19:05,813 | INFO     | collected zombie processes
[2025-10-13 04:20:06] 2025-10-13 08:19:05,814 | INFO     | will attempt to kill all subprocesses of pid=2116
[2025-10-13 04:20:06] 2025-10-13 08:19:05,903 | INFO     | process IDs to be killed: [2116] (in reverse order)
[2025-10-13 04:20:06] 2025-10-13 08:19:05,955 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:20:06] 2025-10-13 08:19:05,956 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:20:06] 2025-10-13 08:19:05,959 | INFO     | did not find any defunct processes belonging to 2116
[2025-10-13 04:20:06] 2025-10-13 08:19:05,961 | INFO     | did not find any defunct processes belonging to 2116
[2025-10-13 04:20:06] 2025-10-13 08:19:05,962 | INFO     | ready for new job
[2025-10-13 04:20:06] 2025-10-13 08:19:05,962 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:20:06] 2025-10-13 08:19:05,963 | INFO     | ***************************************
[2025-10-13 04:20:06] 2025-10-13 08:19:05,963 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:20:06] 2025-10-13 08:19:05,963 | INFO     | ***************************************
[2025-10-13 04:20:06] 2025-10-13 08:19:05,963 | INFO     | 
[2025-10-13 04:20:06] 2025-10-13 08:19:05,964 | INFO     | architecture information:
[2025-10-13 04:20:06] 2025-10-13 08:19:05,964 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:20:06] 2025-10-13 08:19:05,979 | INFO     | cat /etc/os-release:
[2025-10-13 04:20:06] NAME="CentOS Linux"
[2025-10-13 04:20:06] VERSION="7 (Core)"
[2025-10-13 04:20:06] ID="centos"
[2025-10-13 04:20:06] ID_LIKE="rhel fedora"
[2025-10-13 04:20:06] VERSION_ID="7"
[2025-10-13 04:20:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:20:06] ANSI_COLOR="0;31"
[2025-10-13 04:20:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:20:06] HOME_URL="https://www.centos.org/"
[2025-10-13 04:20:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:20:06] 
[2025-10-13 04:20:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:20:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:20:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:20:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:20:06] 
[2025-10-13 04:20:06] 2025-10-13 08:19:05,980 | INFO     | ***************************************
[2025-10-13 04:20:06] 2025-10-13 08:19:06,483 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:20:06] 2025-10-13 08:19:06,501 | INFO     | sufficient remaining disk space (18581815296 B)
[2025-10-13 04:20:06] 2025-10-13 08:19:06,501 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:20:06] 2025-10-13 08:19:06,501 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:20:06] 2025-10-13 08:19:06,501 | INFO     | update_server=False
[2025-10-13 04:20:06] 2025-10-13 08:19:06,502 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:20:06] 2025-10-13 08:19:06,502 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:20:06] 2025-10-13 08:19:06,531 | INFO     | all job control threads have been joined
[2025-10-13 04:20:06] 2025-10-13 08:19:06,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:20:06] 2025-10-13 08:19:06,816 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:20:06] 2025-10-13 08:19:06,817 | INFO     | aborting loop
[2025-10-13 04:20:06] 2025-10-13 08:19:07,440 | INFO     | all data control threads have been joined
[2025-10-13 04:20:06] 2025-10-13 08:19:07,503 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:07,504 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:07,537 | INFO     | [job] control thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:07,751 | INFO     | all payload control threads have been joined
[2025-10-13 04:20:06] 2025-10-13 08:19:07,759 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:07,822 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:07,856 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,274 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,315 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,446 | INFO     | [data] control thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,524 | INFO     | [job] validate thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,708 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,720 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,757 | INFO     | [payload] control thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,851 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:08,873 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:09,276 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:20:06] 2025-10-13 08:19:13,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:20:06] 2025-10-13 08:19:37,609 | INFO     | PID=27397 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 04:20:06] 2025-10-13 08:19:37,609 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:20:06] 2025-10-13 08:19:37,609 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:20:06] 2025-10-13 08:19:37,609 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:20:06] 2025-10-13 08:20:00,030 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:20:06] 2025-10-13 08:20:01,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140469171083072)>', '<ExcThread(monitor, started 140468331452160)>']
[2025-10-13 04:20:06] 2025-10-13 08:20:01,717 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:20:06] 2025-10-13 08:20:01,717 | INFO     | [monitor] control thread has ended
[2025-10-13 04:20:06] 2025-10-13 08:20:06,508 | INFO     | all workflow threads have been joined
[2025-10-13 04:20:06] 2025-10-13 08:20:06,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:20:06] 2025-10-13 08:20:06,508 | INFO     | traces error code: 0
[2025-10-13 04:20:06] 2025-10-13 08:20:06,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:20:06] 2025-10-13 08:20:06,604 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:20:06] 2025-10-13 08:20:06,607 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:20:06] 2025-10-13 08:20:06,611 [wrapper] pilotpid: 27397
[2025-10-13 04:20:06] 2025-10-13 08:20:06,615 [wrapper] Pilot exit status: 0
[2025-10-13 04:20:06] 2025-10-13 08:20:06,631 [wrapper] pandaids: 6841294566
[2025-10-13 04:20:06] 2025-10-13 08:20:06,676 [wrapper] cleanup supervisor_pilot  5007 27398
[2025-10-13 04:20:06] 2025-10-13 08:20:06,680 [wrapper] Test setup, not cleaning
[2025-10-13 04:20:06] 2025-10-13 08:20:06,684 [wrapper] apfmon messages muted
[2025-10-13 04:20:06] 2025-10-13 08:20:06,687 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:20:06] 2025-10-13 08:20:06,691 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:20:06]  *** Error codes and diagnostics ***
[2025-10-13 04:20:06]     "exeErrorCode": 0,
[2025-10-13 04:20:06]     "exeErrorDiag": "",
[2025-10-13 04:20:06]     "pilotErrorCode": 0,
[2025-10-13 04:20:06]     "pilotErrorDiag": "",
[2025-10-13 04:20:06]  *** Listing of results directory ***
[2025-10-13 04:20:06] total 415476
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 22:00 pilot3.tar.gz
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 22:26 queuedata.json
[2025-10-13 04:20:06] -rwx------ 1 boincer umatlas     36292 Oct 12 22:27 runpilot2-wrapper.sh
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas       100 Oct 13 03:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:20:06] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 03:11 run_atlas
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas       105 Oct 13 03:11 job.xml
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas 221115135 Oct 13 03:11 EVNT.46676267._002310.pool.root.1
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 03:11 input.tar.gz
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:11 start_atlas.sh
[2025-10-13 04:20:06] drwxrwx--x 2 boincer umatlas      4096 Oct 13 03:11 shared
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas         0 Oct 13 03:11 boinc_lockfile
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 03:11 pandaJob.out
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas    972849 Oct 13 03:11 agis_schedconf.cvmfs.json
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas   1560580 Oct 13 03:11 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:20:06] drwx------ 5 boincer umatlas      4096 Oct 13 03:11 pilot3
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas      5954 Oct 13 04:13 init_data.xml
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas 198470807 Oct 13 04:18 HITS.46676269._094996.pool.root.1
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas        95 Oct 13 04:18 pilot_heartbeat.json
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas      1049 Oct 13 04:18 memory_monitor_summary.json
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas       529 Oct 13 04:18 boinc_task_state.xml
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas    388432 Oct 13 04:18 log.46676269._094996.job.log.tgz.1
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas      7850 Oct 13 04:19 heartbeat.json
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:19 boinc_mmap_file
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas        27 Oct 13 04:19 wrapper_checkpoint.txt
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas      4746 Oct 13 04:20 pilotlog.txt
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas    591644 Oct 13 04:20 log.46676269._094996.job.log.1
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas       357 Oct 13 04:20 output.list
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:20 runtime_log
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas   1003520 Oct 13 04:20 result.tar.gz
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 04:20 runtime_log.err
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas       659 Oct 13 04:20 nchMDmATNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmpXVMDmMlCU6n.diag
[2025-10-13 04:20:06] -rw-r--r-- 1 boincer umatlas     21621 Oct 13 04:20 stderr.txt
[2025-10-13 04:20:06] HITS file was successfully produced:
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas 198470807 Oct 13 04:18 shared/HITS.pool.root.1
[2025-10-13 04:20:06]  *** Contents of shared directory: ***
[2025-10-13 04:20:06] total 411316
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas 221115135 Oct 13 03:11 ATLAS.root_0
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas    569684 Oct 13 03:11 input.tar.gz
[2025-10-13 04:20:06] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 03:11 start_atlas.sh
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas 198470807 Oct 13 04:18 HITS.pool.root.1
[2025-10-13 04:20:06] -rw------- 1 boincer umatlas   1003520 Oct 13 04:20 result.tar.gz
04:20:08 (23712): run_atlas exited; CPU time 42426.603487
04:20:08 (23712): called boinc_finish(0)

</stderr_txt>
]]>

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