Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:41:13 (3017842): wrapper (7.7.26015): starting
03:41:13 (3017842): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:41:13] Arguments: --nthreads 8
[2025-10-13 03:41:13] Threads: 8
[2025-10-13 03:41:13] Checking for CVMFS
[2025-10-13 03:41:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:41:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:41:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:41:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:41:13] 2.13.2.0 5242 6807 135472 151653 1 441 39195390 40960001 18743 16776704 0 24224315 99.746 14326615 32311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:41:13] CVMFS is ok
[2025-10-13 03:41:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:41:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:41:13] Further information can be found at the LHC@home message board.
[2025-10-13 03:41:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:41:13] Checking for apptainer binary...
[2025-10-13 03:41:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:41:13] Running /usr/bin/apptainer --version
[2025-10-13 03:41:13] apptainer version 1.4.3-1.el9
[2025-10-13 03:41:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:41:14] c-212-1.aglt2.org
[2025-10-13 03:41:14] apptainer works
[2025-10-13 03:41:14] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:41:14] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:41:14] Starting ATLAS job with PandaID=6841124359
[2025-10-13 03:41:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:03:37]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:03:37]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/47/log.46676269._094267.job.log.tgz.1
[2025-10-13 05:03:37]  workdir=None
[2025-10-13 05:03:37] ]
[2025-10-13 05:03:37] 2025-10-13 08:58:15,447 | INFO     | transferring file log.46676269._094267.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841124359/log.46676269._094267.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 05:03:37] 2025-10-13 08:58:15,447 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841124359/log.46676269._094267.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._094267.job
[2025-10-13 05:03:37] 2025-10-13 08:58:15,473 | INFO     | adding to output.list: log.46676269._094267.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/2b/47/log.46676269._094267.job.log.tg
[2025-10-13 05:03:37] 2025-10-13 08:58:15,474 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 05:03:37] 2025-10-13 08:58:15,474 | INFO     | summary of transferred files:
[2025-10-13 05:03:37] 2025-10-13 08:58:15,474 | INFO     |  -- lfn=log.46676269._094267.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 05:03:37] 2025-10-13 08:58:15,474 | INFO     | stage-out finished correctly
[2025-10-13 05:03:37] 2025-10-13 08:58:16,047 | INFO     | PID=3021531 has CPU usage=9.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:03:37] 2025-10-13 08:58:16,047 | INFO     | .. there are 24 such processes running
[2025-10-13 05:03:37] 2025-10-13 08:58:17,048 | INFO     | time since job start (4612s) is within the limit (172800.0s)
[2025-10-13 05:03:37] 2025-10-13 08:58:17,717 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 05:03:37] 2025-10-13 08:58:18,019 | INFO     | job 6841124359 has state=finished
[2025-10-13 05:03:37] 2025-10-13 08:58:18,019 | INFO     | preparing for final server update for job 6841124359 in state='finished'
[2025-10-13 05:03:37] 2025-10-13 08:58:18,020 | INFO     | this job has now completed (state=finished)
[2025-10-13 05:03:37] 2025-10-13 08:58:18,020 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 05:03:37] 2025-10-13 08:58:18,020 | INFO     | log transfer has been attempted: DONE
[2025-10-13 05:03:37] 2025-10-13 08:58:18,020 | INFO     | job 6841124359 has finished - writing final server update
[2025-10-13 05:03:37] 2025-10-13 08:58:18,021 | INFO     | total number of processed events: 400 (read)
[2025-10-13 05:03:37] 2025-10-13 08:58:18,022 | INFO     | executing command: lscpu
[2025-10-13 05:03:37] 2025-10-13 08:58:18,095 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 05:03:37] 2025-10-13 08:58:19,053 | INFO     | time since job start (4614s) is within the limit (172800.0s)
[2025-10-13 05:03:37] 2025-10-13 08:58:19,485 | WARNING  | process 3028280 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 05:03:37] 2025-10-13 08:58:19,485 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841124359/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:03:37] 2025-10-13 08:58:19,486 | INFO     | reaping zombies for max 20 seconds
[2025-10-13 05:03:37] 2025-10-13 08:58:19,502 | INFO     | checking for looping job (in state=finished)
[2025-10-13 05:03:37] 2025-10-13 08:58:19,502 | INFO     | using looping job limit: 7200 s
[2025-10-13 05:03:37] 2025-10-13 08:58:19,867 | INFO     | number of running child processes to parent process 3028280: 1
[2025-10-13 05:03:37] 2025-10-13 08:58:19,868 | INFO     | maximum number of monitored processes: 6
[2025-10-13 05:03:37] 2025-10-13 08:58:21,059 | INFO     | time since job start (4616s) is within the limit (172800.0s)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,371 | INFO     | monitor loop #332: job 0:6841124359 is in state 'finished'
[2025-10-13 05:03:37] 2025-10-13 08:58:22,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,560 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 05:03:37] 2025-10-13 08:58:22,566 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3010.806458333333
[2025-10-13 05:03:37] 2025-10-13 08:58:22,581 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841124359/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,581 | INFO     | extracted standard info from prmon json
[2025-10-13 05:03:37] 2025-10-13 08:58:22,581 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 05:03:37] 2025-10-13 08:58:22,582 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:03:37] 2025-10-13 08:58:22,582 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:03:37] 2025-10-13 08:58:22,582 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:03:37] 2025-10-13 08:58:22,583 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:03:37] 2025-10-13 08:58:22,583 | INFO     | sum of square deviations: 101843770.0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | sum of deviations: -3566082936.000001
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | mean x: 1760343692.0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | mean y: 2567783.7536231885
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | -- intersect: 61641405402.75026
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | intersect: 61641405402.75026
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | chi2: 0.008288342574166946
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | -- intersect: 61641405402.75026
[2025-10-13 05:03:37] 2025-10-13 08:58:22,584 | INFO     | current memory leak: -35.02 B/s (using 69 data points, chi2=0.01)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | could have reported an average CPU frequency of 3016 MHz (6 samples)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | ..............................
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . Timing measurements:
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . get job = 0 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . initial setup = 2 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . payload setup = 6 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . stage-in = 0 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . payload execution = 4583 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . stage-out = 0 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | . log creation = 0 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,585 | INFO     | ..............................
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | 
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | job summary report
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | --------------------------------------------------
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | PanDA job id: 6841124359
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | task id: 46676269
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | errors: (none)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | pilot state: finished 
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | transexitcode: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,661 | INFO     | exeerrorcode: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | exeerrordiag: 
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | exitcode: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | exitmsg: OK
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | cpuconsumptiontime: 33514 s
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | nevents: 400
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | neventsw: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | pid: 3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | pgrp: 3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | corecount: 8
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | event service: False
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | sizes: {0: 2348806, 5: 2349068, 11: 2349124, 4593: 2384321, 4596: 2384321, 4601: 2384515}
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | --------------------------------------------------
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | 
[2025-10-13 05:03:37] 2025-10-13 08:58:22,662 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:03:37] 2025-10-13 08:58:22,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,682 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,682 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,683 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | job 6841124359 has completed (purged errors)
[2025-10-13 05:03:37] 2025-10-13 08:58:22,684 | INFO     | overall cleanup function is called
[2025-10-13 05:03:37] 2025-10-13 08:58:23,692 | INFO     | --- collectZombieJob: --- 10, [3028280]
[2025-10-13 05:03:37] 2025-10-13 08:58:23,692 | INFO     | zombie collector waiting for pid 3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:23,692 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:03:37] 2025-10-13 08:58:23,692 | INFO     | collected zombie processes
[2025-10-13 05:03:37] 2025-10-13 08:58:23,692 | INFO     | will attempt to kill all subprocesses of pid=3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:24,089 | INFO     | process IDs to be killed: [3028280] (in reverse order)
[2025-10-13 05:03:37] 2025-10-13 08:58:24,220 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:03:37] 2025-10-13 08:58:24,221 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:03:37] 2025-10-13 08:58:24,238 | INFO     | did not find any defunct processes belonging to 3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:24,255 | INFO     | did not find any defunct processes belonging to 3028280
[2025-10-13 05:03:37] 2025-10-13 08:58:24,256 | INFO     | ready for new job
[2025-10-13 05:03:37] 2025-10-13 08:58:24,256 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:03:37] 2025-10-13 08:58:24,258 | INFO     | ***************************************
[2025-10-13 05:03:37] 2025-10-13 08:58:24,258 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:03:37] 2025-10-13 08:58:24,258 | INFO     | ***************************************
[2025-10-13 05:03:37] 2025-10-13 08:58:24,258 | INFO     | 
[2025-10-13 05:03:37] 2025-10-13 08:58:24,263 | INFO     | architecture information:
[2025-10-13 05:03:37] 2025-10-13 08:58:24,264 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:03:37] 2025-10-13 08:58:24,283 | INFO     | cat /etc/os-release:
[2025-10-13 05:03:37] NAME="CentOS Linux"
[2025-10-13 05:03:37] VERSION="7 (Core)"
[2025-10-13 05:03:37] ID="centos"
[2025-10-13 05:03:37] ID_LIKE="rhel fedora"
[2025-10-13 05:03:37] VERSION_ID="7"
[2025-10-13 05:03:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:03:37] ANSI_COLOR="0;31"
[2025-10-13 05:03:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:03:37] HOME_URL="https://www.centos.org/"
[2025-10-13 05:03:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:03:37] 
[2025-10-13 05:03:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:03:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:03:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:03:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:03:37] 
[2025-10-13 05:03:37] 2025-10-13 08:58:24,283 | INFO     | ***************************************
[2025-10-13 05:03:37] 2025-10-13 08:58:24,786 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:03:37] 2025-10-13 08:58:24,810 | INFO     | sufficient remaining disk space (125431709696 B)
[2025-10-13 05:03:37] 2025-10-13 08:58:24,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:03:37] 2025-10-13 08:58:24,811 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:03:37] 2025-10-13 08:58:24,811 | INFO     | update_server=False
[2025-10-13 05:03:37] 2025-10-13 08:58:24,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:03:37] 2025-10-13 08:58:24,874 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:03:37] 2025-10-13 08:58:24,874 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:03:37] 2025-10-13 08:58:24,874 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:03:37] 2025-10-13 08:58:24,874 | INFO     | will abort loop
[2025-10-13 05:03:37] 2025-10-13 08:58:24,890 | INFO     | all job control threads have been joined
[2025-10-13 05:03:37] 2025-10-13 08:58:25,141 | INFO     | all data control threads have been joined
[2025-10-13 05:03:37] 2025-10-13 08:58:25,818 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:25,880 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:25,895 | INFO     | [job] control thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,077 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:03:37] 2025-10-13 08:58:26,103 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,147 | INFO     | [data] control thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,190 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,224 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,232 | INFO     | all payload control threads have been joined
[2025-10-13 05:03:37] 2025-10-13 08:58:26,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,360 | INFO     | [job] validate thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,596 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:26,994 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:27,237 | INFO     | [payload] control thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:27,413 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:27,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:03:37] 2025-10-13 08:58:28,082 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:28,300 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:03:37] 2025-10-13 08:58:28,678 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:32,307 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:03:37] 2025-10-13 08:58:32,843 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:03:37] 2025-10-13 08:58:33,064 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585880393536)>', '<ExcThread(monitor, started 140584882796288)>']
[2025-10-13 05:03:37] 2025-10-13 08:58:38,090 | INFO     | all workflow threads have been joined
[2025-10-13 05:03:37] 2025-10-13 08:58:38,091 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:03:37] 2025-10-13 08:58:38,091 | INFO     | traces error code: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:38,091 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:03:37] 2025-10-13 08:58:54,584 | INFO     | PID=3021531 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:03:37] 2025-10-13 08:58:54,584 | INFO     | .. there are 24 such processes running
[2025-10-13 05:03:37] 2025-10-13 08:58:54,585 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:03:37] 2025-10-13 08:58:54,585 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:03:37] 2025-10-13 08:58:54,586 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:03:37] 2025-10-13 08:58:54,586 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:03:37] 2025-10-13 08:58:54,586 | INFO     | [monitor] control thread has ended
[2025-10-13 05:03:37] 2025-10-13 08:58:54,732 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:03:37] 2025-10-13 08:58:54,735 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:03:37] 2025-10-13 08:58:54,737 [wrapper] pilotpid: 3021531
[2025-10-13 05:03:37] 2025-10-13 08:58:54,740 [wrapper] Pilot exit status: 0
[2025-10-13 05:03:37] 2025-10-13 08:58:54,750 [wrapper] pandaids: 6841124359
[2025-10-13 05:03:37] 2025-10-13 08:58:54,841 [wrapper] cleanup supervisor_pilot 3233296 3021532
[2025-10-13 05:03:37] 2025-10-13 08:58:54,844 [wrapper] Test setup, not cleaning
[2025-10-13 05:03:37] 2025-10-13 08:58:54,847 [wrapper] apfmon messages muted
[2025-10-13 05:03:37] 2025-10-13 08:58:54,849 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:03:37] 2025-10-13 08:58:54,851 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:03:37]  *** Error codes and diagnostics ***
[2025-10-13 05:03:37]     "exeErrorCode": 0,
[2025-10-13 05:03:37]     "exeErrorDiag": "",
[2025-10-13 05:03:37]     "pilotErrorCode": 0,
[2025-10-13 05:03:37]     "pilotErrorDiag": "",
[2025-10-13 05:03:37]  *** Listing of results directory ***
[2025-10-13 05:03:37] total 409520
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 05:03:37] -rwx------. 1 boincer umatlas     36292 Oct 12 21:42 runpilot2-wrapper.sh
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:42 queuedata.json
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:03:37] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:41 run_atlas
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:41 job.xml
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas 220784658 Oct 13 03:41 EVNT.46676267._004363.pool.root.1
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 05:03:37] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:41 shared
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 03:41 input.tar.gz
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:41 boinc_lockfile
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 03:41 pandaJob.out
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas    972849 Oct 13 03:41 agis_schedconf.cvmfs.json
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:41 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:03:37] drwx------. 5 boincer umatlas      4096 Oct 13 03:41 pilot3
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas 192683024 Oct 13 04:57 HITS.46676269._094267.pool.root.1
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas       529 Oct 13 04:57 boinc_task_state.xml
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas      1034 Oct 13 04:58 memory_monitor_summary.json
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas    320805 Oct 13 04:58 log.46676269._094267.job.log.tgz.1
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas      7774 Oct 13 04:58 heartbeat.json
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas        95 Oct 13 04:58 pilot_heartbeat.json
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas       823 Oct 13 04:58 pilotlog.txt
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas    670706 Oct 13 04:58 log.46676269._094267.job.log.1
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas       357 Oct 13 04:58 output.list
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:58 runtime_log
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas   1013760 Oct 13 04:58 result.tar.gz
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 04:58 runtime_log.err
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas       651 Oct 13 04:58 8itMDmskMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmGTVMDm3PjIkm.diag
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas      6946 Oct 13 05:01 init_data.xml
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:03 wrapper_checkpoint.txt
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:03 boinc_mmap_file
[2025-10-13 05:03:37] -rw-r--r--. 1 boincer umatlas     22265 Oct 13 05:03 stderr.txt
[2025-10-13 05:03:37] HITS file was successfully produced:
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas 192683024 Oct 13 04:57 shared/HITS.pool.root.1
[2025-10-13 05:03:37]  *** Contents of shared directory: ***
[2025-10-13 05:03:37] total 405352
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas 220784658 Oct 13 03:41 ATLAS.root_0
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:41 start_atlas.sh
[2025-10-13 05:03:37] -rw-r--r--. 2 boincer umatlas    569676 Oct 13 03:41 input.tar.gz
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas 192683024 Oct 13 04:57 HITS.pool.root.1
[2025-10-13 05:03:37] -rw-------. 1 boincer umatlas   1013760 Oct 13 04:58 result.tar.gz
05:03:38 (3017842): run_atlas exited; CPU time 33652.394930
05:03:38 (3017842): called boinc_finish(0)

</stderr_txt>
]]>

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