Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:37:51 (669996): wrapper (7.7.26015): starting
10:37:51 (669996): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 10:37:51] Arguments: --nthreads 3
[2025-10-13 10:37:51] Threads: 3
[2025-10-13 10:37:51] Checking for CVMFS
[2025-10-13 10:37:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 10:37:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 10:37:51] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 10:38:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 10:38:14] 2.9.2.0 2543460 5531 84864 151654 0 57 4285449 36864001 0 130560 0 4269457 99.991 189250 908 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 10:38:14] CVMFS is ok
[2025-10-13 10:38:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 10:38:14] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 10:38:14] Further information can be found at the LHC@home message board.
[2025-10-13 10:38:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 10:38:14] Checking for apptainer binary...
[2025-10-13 10:38:14] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 10:38:14] Running /usr/bin/apptainer --version
[2025-10-13 10:38:14] apptainer version 1.4.1-1.1
[2025-10-13 10:38:14] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 10:38:14] cosA125b
[2025-10-13 10:38:14] apptainer works
[2025-10-13 10:38:14] Set ATHENA_PROC_NUMBER=3
[2025-10-13 10:38:14] Set ATHENA_CORE_NUMBER=3
[2025-10-13 10:38:14] Starting ATLAS job with PandaID=6841227633
[2025-10-13 10:38:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 12:01:36]  *** The last 200 lines of the pilot log: ***
[2025-10-13 12:01:36]  workdir=None
[2025-10-13 12:01:36] ]
[2025-10-13 12:01:36] 2025-10-13 10:01:09,392 | INFO     | transferring file log.46676269._094899.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6841227633/log.46676269._094899.job.log.tgz.1 to /local/data/boinc/
[2025-10-13 12:01:36] 2025-10-13 10:01:09,392 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6841227633/log.46676269._094899.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0948
[2025-10-13 12:01:36] 2025-10-13 10:01:09,405 | INFO     | adding to output.list: log.46676269._094899.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/ff/57/log.46676269._094899.job.log.tg
[2025-10-13 12:01:36] 2025-10-13 10:01:09,406 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 12:01:36] 2025-10-13 10:01:09,406 | INFO     | summary of transferred files:
[2025-10-13 12:01:36] 2025-10-13 10:01:09,406 | INFO     |  -- lfn=log.46676269._094899.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 12:01:36] 2025-10-13 10:01:09,406 | INFO     | stage-out finished correctly
[2025-10-13 12:01:36] 2025-10-13 10:01:10,088 | INFO     | time since job start (4971s) is within the limit (172800.0s)
[2025-10-13 12:01:36] 2025-10-13 10:01:10,191 | INFO     | monitor loop #381: job 0:6841227633 is in state 'finished'
[2025-10-13 12:01:36] 2025-10-13 10:01:10,191 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:01:36] 2025-10-13 10:01:12,094 | INFO     | time since job start (4973s) is within the limit (172800.0s)
[2025-10-13 12:01:36] 2025-10-13 10:01:12,694 | INFO     | monitor loop #382: job 0:6841227633 is in state 'finished'
[2025-10-13 12:01:36] 2025-10-13 10:01:12,694 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:01:36] 2025-10-13 10:01:12,894 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 12:01:36] 2025-10-13 10:01:12,922 | INFO     | job 6841227633 has state=finished
[2025-10-13 12:01:36] 2025-10-13 10:01:12,922 | INFO     | preparing for final server update for job 6841227633 in state='finished'
[2025-10-13 12:01:36] 2025-10-13 10:01:13,507 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 12:01:36] 2025-10-13 10:01:13,507 | INFO     | this job has now completed (state=finished)
[2025-10-13 12:01:36] 2025-10-13 10:01:13,507 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 12:01:36] 2025-10-13 10:01:13,507 | INFO     | log transfer has been attempted: DONE
[2025-10-13 12:01:36] 2025-10-13 10:01:13,507 | INFO     | job 6841227633 has finished - writing final server update
[2025-10-13 12:01:36] 2025-10-13 10:01:13,508 | INFO     | total number of processed events: 400 (read)
[2025-10-13 12:01:36] 2025-10-13 10:01:13,508 | INFO     | executing command: lscpu
[2025-10-13 12:01:36] 2025-10-13 10:01:13,520 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 12:01:36] 2025-10-13 10:01:14,097 | INFO     | time since job start (4975s) is within the limit (172800.0s)
[2025-10-13 12:01:36] 2025-10-13 10:01:15,197 | INFO     | monitor loop #383: job 0:6841227633 is in state 'finished'
[2025-10-13 12:01:36] 2025-10-13 10:01:15,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:01:36] 2025-10-13 10:01:16,102 | INFO     | time since job start (4977s) is within the limit (172800.0s)
[2025-10-13 12:01:36] 2025-10-13 10:01:17,178 | INFO     | PID=673752 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-13 12:01:36] 2025-10-13 10:01:17,700 | INFO     | monitor loop #384: job 0:6841227633 is in state 'finished'
[2025-10-13 12:01:36] 2025-10-13 10:01:17,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,161 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 12:01:36] 2025-10-13 10:01:18,162 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3978.0070833333334
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6841227633/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | INFO     | extracted standard info from prmon json
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 12:01:36] 2025-10-13 10:01:18,163 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | fitting pss+swap vs Time
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | sum of square deviations: 130793150.0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | sum of deviations: -13739883085.000002
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | mean x: 1760347281.0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | mean y: 2481026.8933333335
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | -- intersect: 184927806473.50613
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | intersect: 184927806473.50613
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | chi2: 0.08253580289598159
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | -- intersect: 184927806473.50613
[2025-10-13 12:01:36] 2025-10-13 10:01:18,164 | INFO     | current memory leak: -105.05 B/s (using 75 data points, chi2=0.08)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | could have reported an average CPU frequency of 3990 MHz (6 samples)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | ..............................
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . Timing measurements:
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . get job = 0 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . initial setup = 1 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . payload setup = 2 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . stage-in = 0 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . payload execution = 4950 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . stage-out = 0 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | . log creation = 0 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,165 | INFO     | ..............................
[2025-10-13 12:01:36] 2025-10-13 10:01:18,183 | INFO     | time since job start (4979s) is within the limit (172800.0s)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,196 | INFO     | 
[2025-10-13 12:01:36] 2025-10-13 10:01:18,196 | INFO     | job summary report
[2025-10-13 12:01:36] 2025-10-13 10:01:18,196 | INFO     | --------------------------------------------------
[2025-10-13 12:01:36] 2025-10-13 10:01:18,196 | INFO     | PanDA job id: 6841227633
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | task id: 46676269
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | errors: (none)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | pilot state: finished 
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | transexitcode: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | exeerrorcode: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | exeerrordiag: 
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | exitcode: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | exitmsg: OK
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | cpuconsumptiontime: 14291 s
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | nevents: 400
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | neventsw: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | pid: 680219
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | pgrp: 680219
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | corecount: 3
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | event service: False
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | sizes: {0: 2348810, 2: 2349072, 11: 2349100, 4956: 2384573, 4960: 2384573, 4965: 2384767}
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | --------------------------------------------------
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | 
[2025-10-13 12:01:36] 2025-10-13 10:01:18,197 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,209 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,210 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,210 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 12:01:36] 2025-10-13 10:01:18,210 | INFO     | job 6841227633 has completed (purged errors)
[2025-10-13 12:01:36] 2025-10-13 10:01:18,210 | INFO     | overall cleanup function is called
[2025-10-13 12:01:36] 2025-10-13 10:01:19,216 | INFO     | --- collectZombieJob: --- 10, [680219]
[2025-10-13 12:01:36] 2025-10-13 10:01:19,216 | INFO     | zombie collector waiting for pid 680219
[2025-10-13 12:01:36] 2025-10-13 10:01:19,216 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 12:01:36] 2025-10-13 10:01:19,216 | INFO     | collected zombie processes
[2025-10-13 12:01:36] 2025-10-13 10:01:19,216 | INFO     | will attempt to kill all subprocesses of pid=680219
[2025-10-13 12:01:36] 2025-10-13 10:01:19,267 | INFO     | process IDs to be killed: [680219] (in reverse order)
[2025-10-13 12:01:36] 2025-10-13 10:01:19,293 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 12:01:36] 2025-10-13 10:01:19,294 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 12:01:36] 2025-10-13 10:01:19,295 | INFO     | did not find any defunct processes belonging to 680219
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | did not find any defunct processes belonging to 680219
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | ready for new job
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | ***************************************
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | ***************************************
[2025-10-13 12:01:36] 2025-10-13 10:01:19,297 | INFO     | 
[2025-10-13 12:01:36] 2025-10-13 10:01:19,298 | INFO     | architecture information:
[2025-10-13 12:01:36] 2025-10-13 10:01:19,298 | INFO     | executing command: cat /etc/os-release
[2025-10-13 12:01:36] 2025-10-13 10:01:19,306 | INFO     | cat /etc/os-release:
[2025-10-13 12:01:36] NAME="CentOS Linux"
[2025-10-13 12:01:36] VERSION="7 (Core)"
[2025-10-13 12:01:36] ID="centos"
[2025-10-13 12:01:36] ID_LIKE="rhel fedora"
[2025-10-13 12:01:36] VERSION_ID="7"
[2025-10-13 12:01:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 12:01:36] ANSI_COLOR="0;31"
[2025-10-13 12:01:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 12:01:36] HOME_URL="https://www.centos.org/"
[2025-10-13 12:01:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 12:01:36] 
[2025-10-13 12:01:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 12:01:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 12:01:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 12:01:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 12:01:36] 
[2025-10-13 12:01:36] 2025-10-13 10:01:19,306 | INFO     | ***************************************
[2025-10-13 12:01:36] 2025-10-13 10:01:19,809 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | INFO     | sufficient remaining disk space (357945049088 B)
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | INFO     | update_server=False
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 12:01:36] 2025-10-13 10:01:19,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 12:01:36] 2025-10-13 10:01:19,820 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:01:36] 2025-10-13 10:01:19,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 12:01:36] 2025-10-13 10:01:20,203 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 12:01:36] 2025-10-13 10:01:20,203 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 12:01:36] 2025-10-13 10:01:20,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 12:01:36] 2025-10-13 10:01:20,203 | INFO     | will abort loop
[2025-10-13 12:01:36] 2025-10-13 10:01:20,512 | INFO     | all data control threads have been joined
[2025-10-13 12:01:36] 2025-10-13 10:01:20,744 | INFO     | all job control threads have been joined
[2025-10-13 12:01:36] 2025-10-13 10:01:20,824 | INFO     | [job] retrieve thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:20,825 | INFO     | [job] queue monitor thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,048 | INFO     | all payload control threads have been joined
[2025-10-13 12:01:36] 2025-10-13 10:01:21,180 | INFO     | [data] copytool_in thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,208 | INFO     | [job] job monitor thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,360 | INFO     | [payload] validate_post thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,518 | INFO     | [data] control thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,701 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,707 | INFO     | [job] validate thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,750 | INFO     | [job] control thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,804 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:21,954 | INFO     | [data] copytool_out thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:22,053 | INFO     | [payload] control thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:22,122 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:22,409 | INFO     | [payload] failed_post thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:23,825 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:25,748 | INFO     | [monitor] cgroup control has ended
[2025-10-13 12:01:36] 2025-10-13 10:01:30,278 | INFO     | job.realtimelogging is not enabled
[2025-10-13 12:01:36] 2025-10-13 10:01:31,283 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 12:01:36] 2025-10-13 10:01:31,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214525826880)>', '<ExcThread(monitor, started 140213904996096)>']
[2025-10-13 12:01:36] 2025-10-13 10:01:31,881 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 12:01:36] 2025-10-13 10:01:31,881 | INFO     | [monitor] control thread has ended
[2025-10-13 12:01:36] 2025-10-13 10:01:36,491 | INFO     | all workflow threads have been joined
[2025-10-13 12:01:36] 2025-10-13 10:01:36,491 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 12:01:36] 2025-10-13 10:01:36,492 | INFO     | traces error code: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:36,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 12:01:36] 2025-10-13 10:01:36,538 [wrapper] ==== pilot stdout END ====
[2025-10-13 12:01:36] 2025-10-13 10:01:36,541 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 12:01:36] 2025-10-13 10:01:36,543 [wrapper] pilotpid: 673752
[2025-10-13 12:01:36] 2025-10-13 10:01:36,545 [wrapper] Pilot exit status: 0
[2025-10-13 12:01:36] 2025-10-13 10:01:36,553 [wrapper] pandaids: 6841227633
[2025-10-13 12:01:36] 2025-10-13 10:01:36,571 [wrapper] cleanup supervisor_pilot  702284 673753
[2025-10-13 12:01:36] 2025-10-13 10:01:36,573 [wrapper] Test setup, not cleaning
[2025-10-13 12:01:36] 2025-10-13 10:01:36,575 [wrapper] apfmon messages muted
[2025-10-13 12:01:36] 2025-10-13 10:01:36,578 [wrapper] ==== wrapper stdout END ====
[2025-10-13 12:01:36] 2025-10-13 10:01:36,580 [wrapper] ==== wrapper stderr END ====
[2025-10-13 12:01:36]  *** Error codes and diagnostics ***
[2025-10-13 12:01:36]     "exeErrorCode": 0,
[2025-10-13 12:01:36]     "exeErrorDiag": "",
[2025-10-13 12:01:36]     "pilotErrorCode": 0,
[2025-10-13 12:01:36]     "pilotErrorDiag": "",
[2025-10-13 12:01:36]  *** Listing of results directory ***
[2025-10-13 12:01:36] total 412408
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 12:01:36] -rwx------ 1 boinc boinc     36292 Oct 13 04:20 runpilot2-wrapper.sh
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:20 queuedata.json
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc       100 Oct 13 10:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 12:01:36] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 10:37 run_atlas
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc       105 Oct 13 10:37 job.xml
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc 221349513 Oct 13 10:37 EVNT.46676267._002312.pool.root.1
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:37 input.tar.gz
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:37 start_atlas.sh
[2025-10-13 12:01:36] drwxrwx--x 2 boinc boinc      4096 Oct 13 10:37 shared
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:37 boinc_setup_complete
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc      6441 Oct 13 10:37 init_data.xml
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc         0 Oct 13 10:37 boinc_lockfile
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc      2550 Oct 13 10:38 pandaJob.out
[2025-10-13 12:01:36] -rw------- 1 boinc boinc    972857 Oct 13 10:38 agis_schedconf.cvmfs.json
[2025-10-13 12:01:36] -rw------- 1 boinc boinc   1560580 Oct 13 10:38 agis_ddmendpoints.agis.ALL.json
[2025-10-13 12:01:36] drwx------ 5 boinc boinc      4096 Oct 13 10:38 pilot3
[2025-10-13 12:01:36] -rw------- 1 boinc boinc        95 Oct 13 12:00 pilot_heartbeat.json
[2025-10-13 12:01:36] -rw------- 1 boinc boinc 195084367 Oct 13 12:00 HITS.46676269._094899.pool.root.1
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc       529 Oct 13 12:01 boinc_task_state.xml
[2025-10-13 12:01:36] -rw------- 1 boinc boinc      1020 Oct 13 12:01 memory_monitor_summary.json
[2025-10-13 12:01:36] -rw------- 1 boinc boinc    253371 Oct 13 12:01 log.46676269._094899.job.log.tgz.1
[2025-10-13 12:01:36] -rw------- 1 boinc boinc      7770 Oct 13 12:01 heartbeat.json
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc      8192 Oct 13 12:01 boinc_mmap_file
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc        27 Oct 13 12:01 wrapper_checkpoint.txt
[2025-10-13 12:01:36] -rw------- 1 boinc boinc      4814 Oct 13 12:01 pilotlog.txt
[2025-10-13 12:01:36] -rw------- 1 boinc boinc    731402 Oct 13 12:01 log.46676269._094899.job.log.1
[2025-10-13 12:01:36] -rw------- 1 boinc boinc       357 Oct 13 12:01 output.list
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc       620 Oct 13 12:01 runtime_log
[2025-10-13 12:01:36] -rw------- 1 boinc boinc   1003520 Oct 13 12:01 result.tar.gz
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc      8787 Oct 13 12:01 runtime_log.err
[2025-10-13 12:01:36] -rw------- 1 boinc boinc       660 Oct 13 12:01 EUdMDmiLNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmqWVMDm3ittJn.diag
[2025-10-13 12:01:36] -rw-r--r-- 1 boinc boinc     22242 Oct 13 12:01 stderr.txt
[2025-10-13 12:01:36] HITS file was successfully produced:
[2025-10-13 12:01:36] -rw------- 1 boinc boinc 195084367 Oct 13 12:00 shared/HITS.pool.root.1
[2025-10-13 12:01:36]  *** Contents of shared directory: ***
[2025-10-13 12:01:36] total 408244
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc 221349513 Oct 13 10:37 ATLAS.root_0
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc    569680 Oct 13 10:37 input.tar.gz
[2025-10-13 12:01:36] -rw-r--r-- 2 boinc boinc     15120 Oct 13 10:37 start_atlas.sh
[2025-10-13 12:01:36] -rw------- 1 boinc boinc 195084367 Oct 13 12:00 HITS.pool.root.1
[2025-10-13 12:01:36] -rw------- 1 boinc boinc   1003520 Oct 13 12:01 result.tar.gz
12:01:38 (669996): run_atlas exited; CPU time 14315.997276
12:01:38 (669996): called boinc_finish(0)

</stderr_txt>
]]>

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