Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:22:57 (31227): wrapper (7.7.26015): starting
17:22:57 (31227): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 17:22:57] Arguments: --nthreads 8
[2025-10-13 17:22:57] Threads: 8
[2025-10-13 17:22:57] Checking for CVMFS
[2025-10-13 17:22:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 17:22:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 17:22:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 17:23:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 17:23:00] 2.11.2.0 31978 222135 143216 151666 1 60 23746020 25165825 4632 130560 0 114747120 99.885 61868745 3173 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 17:23:00] CVMFS is ok
[2025-10-13 17:23:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 17:23:00] Checking for apptainer binary...
[2025-10-13 17:23:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 17:23:00] Running /usr/bin/apptainer --version
[2025-10-13 17:23:00] apptainer version 1.3.2-1.el7
[2025-10-13 17:23:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 17:23:08] cg-vwn266.simple-grid.lan
[2025-10-13 17:23:08] apptainer works
[2025-10-13 17:23:08] Set ATHENA_PROC_NUMBER=8
[2025-10-13 17:23:08] Set ATHENA_CORE_NUMBER=8
[2025-10-13 17:23:08] Starting ATLAS job with PandaID=6841125901
[2025-10-13 17:23:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:31:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:31:22] 2025-10-13 19:30:12,765 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 21:31:22] 2025-10-13 19:30:12,765 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:31:22] 2025-10-13 19:30:12,769 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:31:22] 2025-10-13 19:30:12,770 | INFO     | sum of square deviations: 3772712597.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,772 | INFO     | sum of deviations: 44114518843.500015
[2025-10-13 21:31:22] 2025-10-13 19:30:12,772 | INFO     | mean x: 1760376681.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,772 | INFO     | mean y: 2458218.717391304
[2025-10-13 21:31:22] 2025-10-13 19:30:12,773 | INFO     | -- intersect: -20581715179.264267
[2025-10-13 21:31:22] 2025-10-13 19:30:12,773 | INFO     | intersect: -20581715179.264267
[2025-10-13 21:31:22] 2025-10-13 19:30:12,773 | INFO     | chi2: 6.04821658517883
[2025-10-13 21:31:22] 2025-10-13 19:30:12,774 | INFO     | sum of square deviations: 3531973200.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,775 | INFO     | sum of deviations: 58323254486.000015
[2025-10-13 21:31:22] 2025-10-13 19:30:12,776 | INFO     | mean x: 1760376529.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,776 | INFO     | mean y: 2467049.64
[2025-10-13 21:31:22] 2025-10-13 19:30:12,776 | INFO     | -- intersect: -29066521438.734825
[2025-10-13 21:31:22] 2025-10-13 19:30:12,776 | INFO     | intersect: -29066521438.734825
[2025-10-13 21:31:22] 2025-10-13 19:30:12,776 | INFO     | chi2: 5.330068597640017
[2025-10-13 21:31:22] 2025-10-13 19:30:12,777 | INFO     | current chi2=5.330068597640017 (change=11.873714795509077 %)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,777 | INFO     | right removable region: 224
[2025-10-13 21:31:22] 2025-10-13 19:30:12,777 | INFO     | sum of square deviations: 3531973200.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,779 | INFO     | sum of deviations: -31703100560.000004
[2025-10-13 21:31:22] 2025-10-13 19:30:12,779 | INFO     | mean x: 1760376834.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,780 | INFO     | mean y: 2506189.248888889
[2025-10-13 21:31:22] 2025-10-13 19:30:12,780 | INFO     | -- intersect: 15803703036.324747
[2025-10-13 21:31:22] 2025-10-13 19:30:12,780 | INFO     | intersect: 15803703036.324747
[2025-10-13 21:31:22] 2025-10-13 19:30:12,780 | INFO     | chi2: 1.7487212375977124
[2025-10-13 21:31:22] 2025-10-13 19:30:12,780 | INFO     | current chi2=1.7487212375977124 (change=71.08699377791864 %)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,781 | INFO     | sum of square deviations: 3301699115.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,783 | INFO     | sum of deviations: -57513868940.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,783 | INFO     | mean x: 1760376986.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,783 | INFO     | mean y: 2523130.4954545456
[2025-10-13 21:31:22] 2025-10-13 19:30:12,783 | INFO     | -- intersect: 30667368036.398796
[2025-10-13 21:31:22] 2025-10-13 19:30:12,783 | INFO     | intersect: 30667368036.398796
[2025-10-13 21:31:22] 2025-10-13 19:30:12,784 | INFO     | chi2: 0.9931955252843965
[2025-10-13 21:31:22] 2025-10-13 19:30:12,784 | INFO     | current chi2=0.9931955252843965 (change=43.204468274841304 %)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,784 | INFO     | sum of square deviations: 3081657780.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,786 | INFO     | sum of deviations: -51617181239.00001
[2025-10-13 21:31:22] 2025-10-13 19:30:12,786 | INFO     | mean x: 1760377139.0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,786 | INFO     | mean y: 2519034.2186046513
[2025-10-13 21:31:22] 2025-10-13 19:30:12,786 | INFO     | -- intersect: 29488501034.710335
[2025-10-13 21:31:22] 2025-10-13 19:30:12,786 | INFO     | intersect: 29488501034.710335
[2025-10-13 21:31:22] 2025-10-13 19:30:12,787 | INFO     | chi2: 0.9877413295869232
[2025-10-13 21:31:22] 2025-10-13 19:30:12,787 | INFO     | current chi2=0.9877413295869232 (change=0.5491562898364363 %)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,787 | INFO     | left removable region: 30
[2025-10-13 21:31:22] 2025-10-13 19:30:12,787 | INFO     | sum of square deviations: 2263977332.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,801 | INFO     | sum of deviations: -13579711633.499998
[2025-10-13 21:31:22] 2025-10-13 19:30:12,801 | INFO     | mean x: 1760377413.5
[2025-10-13 21:31:22] 2025-10-13 19:30:12,801 | INFO     | mean y: 2511772.4587628865
[2025-10-13 21:31:22] 2025-10-13 19:30:12,802 | INFO     | -- intersect: 10561547544.720226
[2025-10-13 21:31:22] 2025-10-13 19:30:12,802 | INFO     | intersect: 10561547544.720226
[2025-10-13 21:31:22] 2025-10-13 19:30:12,802 | INFO     | chi2: 0.11979963559724971
[2025-10-13 21:31:22] 2025-10-13 19:30:12,802 | INFO     | -- intersect: 10561547544.720226
[2025-10-13 21:31:22] 2025-10-13 19:30:12,802 | INFO     | current memory leak: -6.00 B/s (using 194 data points, chi2=0.12)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,803 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,803 | INFO     | ..............................
[2025-10-13 21:31:22] 2025-10-13 19:30:12,803 | INFO     | . Timing measurements:
[2025-10-13 21:31:22] 2025-10-13 19:30:12,803 | INFO     | . get job = 0 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . initial setup = 3 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . payload setup = 138 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . stage-in = 0 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . payload execution = 14180 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . stage-out = 4 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | . log creation = 1 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,804 | INFO     | ..............................
[2025-10-13 21:31:22] 2025-10-13 19:30:12,946 | INFO     | 
[2025-10-13 21:31:22] 2025-10-13 19:30:12,946 | INFO     | job summary report
[2025-10-13 21:31:22] 2025-10-13 19:30:12,946 | INFO     | --------------------------------------------------
[2025-10-13 21:31:22] 2025-10-13 19:30:12,946 | INFO     | PanDA job id: 6841125901
[2025-10-13 21:31:22] 2025-10-13 19:30:12,946 | INFO     | task id: 46676269
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | errors: (none)
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | pilot state: finished 
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | transexitcode: 0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | exeerrorcode: 0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | exeerrordiag: 
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | exitcode: 0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | exitmsg: OK
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | cpuconsumptiontime: 53546 s
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | nevents: 400
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | neventsw: 0
[2025-10-13 21:31:22] 2025-10-13 19:30:12,947 | INFO     | pid: 9258
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | pgrp: 9258
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | corecount: 8
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | event service: False
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | sizes: {0: 2348686, 1: 2348885, 2: 2348885, 12: 2348913, 23: 2348941, 34: 2348969, 44: 2349125, 55: 2349153, 66: 2349181, 77: 2349209, 84: 2349527, 87: 2349835, 14
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | --------------------------------------------------
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | 
[2025-10-13 21:31:22] 2025-10-13 19:30:12,948 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,196 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,196 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:31:22] 2025-10-13 19:30:13,196 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:31:22] 2025-10-13 19:30:13,196 | INFO     | job 6841125901 has completed (purged errors)
[2025-10-13 21:31:22] 2025-10-13 19:30:13,197 | INFO     | overall cleanup function is called
[2025-10-13 21:31:22] 2025-10-13 19:30:14,206 | INFO     | --- collectZombieJob: --- 10, [9258]
[2025-10-13 21:31:22] 2025-10-13 19:30:14,206 | INFO     | zombie collector waiting for pid 9258
[2025-10-13 21:31:22] 2025-10-13 19:30:14,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:31:22] 2025-10-13 19:30:14,206 | INFO     | collected zombie processes
[2025-10-13 21:31:22] 2025-10-13 19:30:14,207 | INFO     | will attempt to kill all subprocesses of pid=9258
[2025-10-13 21:31:22] 2025-10-13 19:30:14,305 | INFO     | process IDs to be killed: [9258] (in reverse order)
[2025-10-13 21:31:22] 2025-10-13 19:30:14,369 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:31:22] 2025-10-13 19:30:14,370 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:31:22] 2025-10-13 19:30:14,373 | INFO     | did not find any defunct processes belonging to 9258
[2025-10-13 21:31:22] 2025-10-13 19:30:14,376 | INFO     | did not find any defunct processes belonging to 9258
[2025-10-13 21:31:22] 2025-10-13 19:30:14,376 | INFO     | ready for new job
[2025-10-13 21:31:22] 2025-10-13 19:30:14,376 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:31:22] 2025-10-13 19:30:14,378 | INFO     | ***************************************
[2025-10-13 21:31:22] 2025-10-13 19:30:14,378 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:31:22] 2025-10-13 19:30:14,379 | INFO     | ***************************************
[2025-10-13 21:31:22] 2025-10-13 19:30:14,379 | INFO     | 
[2025-10-13 21:31:22] 2025-10-13 19:30:14,379 | INFO     | pilot is running in a VM
[2025-10-13 21:31:22] 2025-10-13 19:30:14,379 | INFO     | architecture information:
[2025-10-13 21:31:22] 2025-10-13 19:30:14,380 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:31:22] 2025-10-13 19:30:14,457 | INFO     | cat /etc/os-release:
[2025-10-13 21:31:22] NAME="CentOS Linux"
[2025-10-13 21:31:22] VERSION="7 (Core)"
[2025-10-13 21:31:22] ID="centos"
[2025-10-13 21:31:22] ID_LIKE="rhel fedora"
[2025-10-13 21:31:22] VERSION_ID="7"
[2025-10-13 21:31:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:31:22] ANSI_COLOR="0;31"
[2025-10-13 21:31:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:31:22] HOME_URL="https://www.centos.org/"
[2025-10-13 21:31:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:31:22] 
[2025-10-13 21:31:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:31:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:31:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:31:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:31:22] 
[2025-10-13 21:31:22] 2025-10-13 19:30:14,458 | INFO     | ***************************************
[2025-10-13 21:31:22] 2025-10-13 19:30:14,961 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-13 21:31:22] 2025-10-13 19:30:15,098 | INFO     | sufficient remaining disk space (496450404352 B)
[2025-10-13 21:31:22] 2025-10-13 19:30:15,098 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:31:22] 2025-10-13 19:30:15,098 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:31:22] 2025-10-13 19:30:15,098 | INFO     | update_server=False
[2025-10-13 21:31:22] 2025-10-13 19:30:15,098 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:31:22] 2025-10-13 19:30:15,101 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:31:22] 2025-10-13 19:30:15,341 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:31:22] 2025-10-13 19:30:15,833 | INFO     | all job control threads have been joined
[2025-10-13 21:31:22] 2025-10-13 19:30:15,946 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:31:22] 2025-10-13 19:30:15,946 | INFO     | aborting loop
[2025-10-13 21:31:22] 2025-10-13 19:30:16,104 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,132 | INFO     | all data control threads have been joined
[2025-10-13 21:31:22] 2025-10-13 19:30:16,459 | INFO     | all payload control threads have been joined
[2025-10-13 21:31:22] 2025-10-13 19:30:16,485 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,749 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,754 | INFO     | [job] validate thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,755 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,839 | INFO     | [job] control thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,852 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,952 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:16,968 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,108 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,142 | INFO     | [data] control thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,312 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,465 | INFO     | [payload] control thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,554 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:17,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:31:22] 2025-10-13 19:30:18,966 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:19,350 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:31:22] 2025-10-13 19:30:45,702 | INFO     | PID=2635 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 21:31:22] 2025-10-13 19:30:45,703 | INFO     | .. there are 9 such processes running
[2025-10-13 21:31:22] 2025-10-13 19:30:45,704 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:31:22] 2025-10-13 19:30:45,704 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:31:22] 2025-10-13 19:30:45,705 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:31:22] 2025-10-13 19:31:11,314 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:31:22] 2025-10-13 19:31:13,104 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140704084371264)>', '<ExcThread(monitor, started 140703615129344)>']
[2025-10-13 21:31:22] 2025-10-13 19:31:13,871 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:31:22] 2025-10-13 19:31:13,871 | INFO     | [monitor] control thread has ended
[2025-10-13 21:31:22] 2025-10-13 19:31:18,130 | INFO     | all workflow threads have been joined
[2025-10-13 21:31:22] 2025-10-13 19:31:18,130 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:31:22] 2025-10-13 19:31:18,130 | INFO     | traces error code: 0
[2025-10-13 21:31:22] 2025-10-13 19:31:18,131 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:31:22] 2025-10-13 19:31:18,463 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:31:22] 2025-10-13 19:31:18,510 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:31:22] 2025-10-13 19:31:18,561 [wrapper] pilotpid: 2635
[2025-10-13 21:31:22] 2025-10-13 19:31:18,610 [wrapper] Pilot exit status: 0
[2025-10-13 21:31:22] 2025-10-13 19:31:19,071 [wrapper] pandaids: 6841125901
[2025-10-13 21:31:22] 2025-10-13 19:31:19,724 [wrapper] cleanup supervisor_pilot  3518 2636
[2025-10-13 21:31:22] 2025-10-13 19:31:19,844 [wrapper] Test setup, not cleaning
[2025-10-13 21:31:22] 2025-10-13 19:31:19,939 [wrapper] apfmon messages muted
[2025-10-13 21:31:22] 2025-10-13 19:31:20,041 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:31:22] 2025-10-13 19:31:20,119 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:31:22]  *** Error codes and diagnostics ***
[2025-10-13 21:31:22]     "exeErrorCode": 0,
[2025-10-13 21:31:22]     "exeErrorDiag": "",
[2025-10-13 21:31:22]     "pilotErrorCode": 0,
[2025-10-13 21:31:22]     "pilotErrorDiag": "",
[2025-10-13 21:31:22]  *** Listing of results directory ***
[2025-10-13 21:31:22] total 411688
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 21:31:22] -rwx------. 1 boinc boinc     36292 Oct 13 04:13 runpilot2-wrapper.sh
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc      5112 Oct 13 04:13 queuedata.json
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc       100 Oct 13 17:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:31:22] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 17:22 run_atlas
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc       105 Oct 13 17:22 job.xml
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc      6390 Oct 13 17:22 init_data.xml
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc 224321410 Oct 13 17:22 EVNT.46676267._004356.pool.root.1
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 17:22 start_atlas.sh
[2025-10-13 21:31:22] drwxrwx--x. 2 boinc boinc        68 Oct 13 17:22 shared
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc    569677 Oct 13 17:22 input.tar.gz
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc         0 Oct 13 17:22 boinc_lockfile
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc      2550 Oct 13 17:23 pandaJob.out
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc    972783 Oct 13 17:26 agis_schedconf.cvmfs.json
[2025-10-13 21:31:22] drwx------. 5 boinc boinc      4096 Oct 13 17:26 pilot3
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc 188545140 Oct 13 21:27 HITS.46676269._094674.pool.root.1
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc       531 Oct 13 21:27 boinc_task_state.xml
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc      1013 Oct 13 21:28 memory_monitor_summary.json
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc   1560580 Oct 13 21:28 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc    459812 Oct 13 21:28 log.46676269._094674.job.log.tgz.1
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc      7774 Oct 13 21:30 heartbeat.json
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc        95 Oct 13 21:30 pilot_heartbeat.json
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc      4883 Oct 13 21:31 pilotlog.txt
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc        28 Oct 13 21:31 wrapper_checkpoint.txt
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc      8192 Oct 13 21:31 boinc_mmap_file
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc   1947976 Oct 13 21:31 log.46676269._094674.job.log.1
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc       357 Oct 13 21:31 output.list
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc       620 Oct 13 21:31 runtime_log
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc   2426880 Oct 13 21:31 result.tar.gz
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc      8703 Oct 13 21:31 runtime_log.err
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc       656 Oct 13 21:31 qvdLDmKFNS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm0UVMDm43AlUo.diag
[2025-10-13 21:31:22] -rw-r--r--. 1 boinc boinc     20609 Oct 13 21:31 stderr.txt
[2025-10-13 21:31:22] HITS file was successfully produced:
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc 188545140 Oct 13 21:27 shared/HITS.pool.root.1
[2025-10-13 21:31:22]  *** Contents of shared directory: ***
[2025-10-13 21:31:22] total 406140
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc 224321410 Oct 13 17:22 ATLAS.root_0
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc     15120 Oct 13 17:22 start_atlas.sh
[2025-10-13 21:31:22] -rw-r--r--. 2 boinc boinc    569677 Oct 13 17:22 input.tar.gz
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc 188545140 Oct 13 21:27 HITS.pool.root.1
[2025-10-13 21:31:22] -rw-------. 1 boinc boinc   2426880 Oct 13 21:31 result.tar.gz
21:31:24 (31227): run_atlas exited; CPU time 53738.273725
21:31:24 (31227): called boinc_finish(0)

</stderr_txt>
]]>

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