Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
04:18:30 (1936665): wrapper (7.7.26015): starting
04:18:30 (1936665): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 04:18:30] Arguments: --nthreads 8
[2025-10-13 04:18:30] Threads: 8
[2025-10-13 04:18:30] Checking for CVMFS
[2025-10-13 04:18:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 04:18:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 04:18:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 04:18:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 04:18:31] 2.13.2.0 79137 136093 590304 151654 3 463 29616701 40960001 48785 16776704 0 476738226 99.819 223920281 32252 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 04:18:31] CVMFS is ok
[2025-10-13 04:18:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 04:18:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 04:18:31] Further information can be found at the LHC@home message board.
[2025-10-13 04:18:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 04:18:31] Checking for apptainer binary...
[2025-10-13 04:18:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 04:18:31] Running /usr/bin/apptainer --version
[2025-10-13 04:18:31] apptainer version 1.4.3-1.el9
[2025-10-13 04:18:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 04:18:32] c8-7-6.aglt2.org
[2025-10-13 04:18:32] apptainer works
[2025-10-13 04:18:32] Set ATHENA_PROC_NUMBER=8
[2025-10-13 04:18:32] Set ATHENA_CORE_NUMBER=8
[2025-10-13 04:18:32] Starting ATLAS job with PandaID=6841124542
[2025-10-13 04:18:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:21:57]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:21:57] 2025-10-13 09:56:33,617 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:34,128 | INFO     | time since job start (5800s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:36,123 | INFO     | monitor loop #353: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:36,123 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:36,134 | INFO     | time since job start (5802s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:38,146 | INFO     | time since job start (5804s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:38,628 | INFO     | monitor loop #354: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:38,628 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:40,153 | INFO     | time since job start (5806s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:41,136 | INFO     | monitor loop #355: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:41,136 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:42,162 | INFO     | time since job start (5808s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:43,688 | INFO     | monitor loop #356: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:43,688 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:44,440 | INFO     | PID=1949751 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:21:57] 2025-10-13 09:56:44,440 | INFO     | .. there are 53 such processes running
[2025-10-13 06:21:57] 2025-10-13 09:56:45,441 | INFO     | time since job start (5811s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:46,198 | INFO     | monitor loop #357: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:46,198 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:47,448 | INFO     | time since job start (5813s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:48,704 | INFO     | monitor loop #358: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:48,704 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:49,460 | INFO     | time since job start (5815s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:51,209 | INFO     | monitor loop #359: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:51,209 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:51,471 | INFO     | time since job start (5817s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:53,488 | INFO     | time since job start (5819s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:53,715 | INFO     | monitor loop #360: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:53,715 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:55,495 | INFO     | time since job start (5821s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:56,221 | INFO     | monitor loop #361: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:56,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:57,512 | INFO     | time since job start (5823s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:58,748 | INFO     | monitor loop #362: job 0:6841124542 is in state 'finished'
[2025-10-13 06:21:57] 2025-10-13 09:56:58,748 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,459 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:21:57] 2025-10-13 09:56:59,465 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3764.497867187499
[2025-10-13 06:21:57] 2025-10-13 09:56:59,490 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6841124542/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,491 | INFO     | extracted standard info from prmon json
[2025-10-13 06:21:57] 2025-10-13 09:56:59,491 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:21:57] 2025-10-13 09:56:59,491 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:21:57] 2025-10-13 09:56:59,491 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:21:57] 2025-10-13 09:56:59,491 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | sum of square deviations: 197221149.08139488
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | sum of deviations: -4843010205.209302
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | mean x: 1760346623.5697675
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | mean y: 2459698.534883721
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | -- intersect: 43229956862.82543
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | intersect: 43229956862.82543
[2025-10-13 06:21:57] 2025-10-13 09:56:59,509 | INFO     | chi2: 0.03755750762676657
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | -- intersect: 43229956862.82543
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | current memory leak: -24.56 B/s (using 86 data points, chi2=0.04)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | could have reported an average CPU frequency of 3783 MHz (7 samples)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | ..............................
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . Timing measurements:
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . get job = 0 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . initial setup = 7 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . payload setup = 39 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . stage-in = 0 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . payload execution = 5679 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . stage-out = 3 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | . log creation = 0 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,510 | INFO     | ..............................
[2025-10-13 06:21:57] 2025-10-13 09:56:59,621 | INFO     | time since job start (5825s) is within the limit (172800.0s)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | 
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | job summary report
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | --------------------------------------------------
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | PanDA job id: 6841124542
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | task id: 46676269
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | errors: (none)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | pilot state: finished 
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | transexitcode: 0
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | exeerrorcode: 0
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | exeerrordiag: 
[2025-10-13 06:21:57] 2025-10-13 09:56:59,834 | INFO     | exitcode: 0
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | exitmsg: OK
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | cpuconsumptiontime: 23828 s
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | nevents: 400
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | neventsw: 0
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | pid: 1973416
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | pgrp: 1973416
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | corecount: 8
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | event service: False
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | sizes: {0: 2347978, 1: 2348663, 2: 2348862, 13: 2348862, 24: 2348918, 33: 2349208, 34: 2349392, 5720: 2375981, 5724: 2384979, 5726: 2385035, 5762: 2385229}
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | --------------------------------------------------
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | 
[2025-10-13 06:21:57] 2025-10-13 09:56:59,835 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 06:21:57] 2025-10-13 09:56:59,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:21:57] 2025-10-13 09:56:59,936 | INFO     | job 6841124542 has completed (purged errors)
[2025-10-13 06:21:57] 2025-10-13 09:56:59,937 | INFO     | overall cleanup function is called
[2025-10-13 06:21:57] 2025-10-13 09:57:00,944 | INFO     | --- collectZombieJob: --- 10, [1973416]
[2025-10-13 06:21:57] 2025-10-13 09:57:00,944 | INFO     | zombie collector waiting for pid 1973416
[2025-10-13 06:21:57] 2025-10-13 09:57:00,944 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:21:57] 2025-10-13 09:57:00,944 | INFO     | collected zombie processes
[2025-10-13 06:21:57] 2025-10-13 09:57:00,944 | INFO     | will attempt to kill all subprocesses of pid=1973416
[2025-10-13 06:21:57] 2025-10-13 09:57:02,751 | INFO     | process IDs to be killed: [1973416] (in reverse order)
[2025-10-13 06:21:57] 2025-10-13 09:57:03,775 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:21:57] 2025-10-13 09:57:03,776 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:21:57] 2025-10-13 09:57:03,814 | INFO     | did not find any defunct processes belonging to 1973416
[2025-10-13 06:21:57] 2025-10-13 09:57:03,844 | INFO     | did not find any defunct processes belonging to 1973416
[2025-10-13 06:21:57] 2025-10-13 09:57:03,844 | INFO     | ready for new job
[2025-10-13 06:21:57] 2025-10-13 09:57:03,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:21:57] 2025-10-13 09:57:03,846 | INFO     | ***************************************
[2025-10-13 06:21:57] 2025-10-13 09:57:03,846 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:21:57] 2025-10-13 09:57:03,846 | INFO     | ***************************************
[2025-10-13 06:21:57] 2025-10-13 09:57:03,846 | INFO     | 
[2025-10-13 06:21:57] 2025-10-13 09:57:03,864 | INFO     | architecture information:
[2025-10-13 06:21:57] 2025-10-13 09:57:03,864 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:21:57] 2025-10-13 09:57:03,878 | INFO     | cat /etc/os-release:
[2025-10-13 06:21:57] NAME="CentOS Linux"
[2025-10-13 06:21:57] VERSION="7 (Core)"
[2025-10-13 06:21:57] ID="centos"
[2025-10-13 06:21:57] ID_LIKE="rhel fedora"
[2025-10-13 06:21:57] VERSION_ID="7"
[2025-10-13 06:21:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:21:57] ANSI_COLOR="0;31"
[2025-10-13 06:21:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:21:57] HOME_URL="https://www.centos.org/"
[2025-10-13 06:21:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:21:57] 
[2025-10-13 06:21:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:21:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:21:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:21:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:21:57] 
[2025-10-13 06:21:57] 2025-10-13 09:57:03,878 | INFO     | ***************************************
[2025-10-13 06:21:57] 2025-10-13 09:57:04,382 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 06:21:57] 2025-10-13 09:57:04,448 | INFO     | sufficient remaining disk space (169019965440 B)
[2025-10-13 06:21:57] 2025-10-13 09:57:04,448 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:21:57] 2025-10-13 09:57:04,449 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:21:57] 2025-10-13 09:57:04,449 | INFO     | update_server=False
[2025-10-13 06:21:57] 2025-10-13 09:57:04,449 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:21:57] 2025-10-13 09:57:04,490 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:21:57] 2025-10-13 09:57:04,504 | INFO     | all payload control threads have been joined
[2025-10-13 06:21:57] 2025-10-13 09:57:04,613 | INFO     | all data control threads have been joined
[2025-10-13 06:21:57] 2025-10-13 09:57:04,706 | INFO     | all job control threads have been joined
[2025-10-13 06:21:57] 2025-10-13 09:57:04,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:21:57] 2025-10-13 09:57:04,787 | INFO     | aborting loop
[2025-10-13 06:21:57] 2025-10-13 09:57:04,851 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:21:57] 2025-10-13 09:57:05,433 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:21:57] 2025-10-13 09:57:05,454 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,510 | INFO     | [payload] control thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,619 | INFO     | [data] control thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,712 | INFO     | [job] control thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,717 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,793 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,857 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,877 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,877 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,878 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,878 | INFO     | [job] validate thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:05,958 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:06,049 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:21:57] 2025-10-13 09:57:06,276 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:06,584 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:07,442 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:10,063 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:21:57] 2025-10-13 09:57:12,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139884544501568)>', '<ExcThread(monitor, started 139883888748288)>']
[2025-10-13 06:21:57] 2025-10-13 09:57:17,163 | INFO     | all workflow threads have been joined
[2025-10-13 06:21:57] 2025-10-13 09:57:17,183 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:21:57] 2025-10-13 09:57:17,183 | INFO     | traces error code: 0
[2025-10-13 06:21:57] 2025-10-13 09:57:17,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:21:57] 2025-10-13 09:57:35,841 | INFO     | PID=1949751 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | INFO     | .. there are 53 such processes running
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:21:57] 2025-10-13 09:57:35,842 | INFO     | [monitor] control thread has ended
[2025-10-13 06:21:57] 2025-10-13 09:57:36,531 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:21:57] 2025-10-13 09:57:36,544 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:21:57] 2025-10-13 09:57:36,583 [wrapper] pilotpid: 1949751
[2025-10-13 06:21:57] 2025-10-13 09:57:36,606 [wrapper] Pilot exit status: 0
[2025-10-13 06:21:57] 2025-10-13 09:57:36,728 [wrapper] pandaids: 6841124542
[2025-10-13 06:21:57] 2025-10-13 09:57:36,892 [wrapper] cleanup supervisor_pilot 3168989 1949752
[2025-10-13 06:21:57] 2025-10-13 09:57:36,903 [wrapper] Test setup, not cleaning
[2025-10-13 06:21:57] 2025-10-13 09:57:36,914 [wrapper] apfmon messages muted
[2025-10-13 06:21:57] 2025-10-13 09:57:36,970 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:21:57] 2025-10-13 09:57:36,986 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:21:57]  *** Error codes and diagnostics ***
[2025-10-13 06:21:57]     "exeErrorCode": 0,
[2025-10-13 06:21:57]     "exeErrorDiag": "",
[2025-10-13 06:21:57]     "pilotErrorCode": 0,
[2025-10-13 06:21:57]     "pilotErrorDiag": "",
[2025-10-13 06:21:57]  *** Listing of results directory ***
[2025-10-13 06:21:57] total 413508
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 06:21:57] -rwx------. 1 boincer umatlas     36292 Oct 12 21:52 runpilot2-wrapper.sh
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:52 queuedata.json
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas       100 Oct 13 04:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:21:57] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 04:18 run_atlas
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas       105 Oct 13 04:18 job.xml
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas 221242134 Oct 13 04:18 EVNT.46676267._004368.pool.root.1
[2025-10-13 06:21:57] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 04:18 shared
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 04:18 input.tar.gz
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas         0 Oct 13 04:18 boinc_lockfile
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 04:18 pandaJob.out
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas    972857 Oct 13 04:19 agis_schedconf.cvmfs.json
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas   1560580 Oct 13 04:19 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:21:57] drwx------. 5 boincer umatlas      4096 Oct 13 04:19 pilot3
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas 196113909 Oct 13 05:55 HITS.46676269._094409.pool.root.1
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:55 boinc_task_state.xml
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas      1048 Oct 13 05:56 memory_monitor_summary.json
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas    349922 Oct 13 05:56 log.46676269._094409.job.log.tgz.1
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas        95 Oct 13 05:56 pilot_heartbeat.json
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas      7805 Oct 13 05:56 heartbeat.json
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas       823 Oct 13 05:57 pilotlog.txt
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas    741531 Oct 13 05:57 log.46676269._094409.job.log.1
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas       357 Oct 13 05:57 output.list
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:57 runtime_log
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas   1105920 Oct 13 05:57 result.tar.gz
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas      8693 Oct 13 05:57 runtime_log.err
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas       655 Oct 13 05:57 6dELDmyuMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmtPmNDmuUhFLo.diag
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas      7162 Oct 13 06:21 init_data.xml
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:21 wrapper_checkpoint.txt
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:21 boinc_mmap_file
[2025-10-13 06:21:57] -rw-r--r--. 1 boincer umatlas     22376 Oct 13 06:21 stderr.txt
[2025-10-13 06:21:57] HITS file was successfully produced:
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas 196113909 Oct 13 05:55 shared/HITS.pool.root.1
[2025-10-13 06:21:57]  *** Contents of shared directory: ***
[2025-10-13 06:21:57] total 409240
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas 221242134 Oct 13 04:18 ATLAS.root_0
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas    569674 Oct 13 04:18 input.tar.gz
[2025-10-13 06:21:57] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 04:18 start_atlas.sh
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas 196113909 Oct 13 05:55 HITS.pool.root.1
[2025-10-13 06:21:57] -rw-------. 1 boincer umatlas   1105920 Oct 13 05:57 result.tar.gz
06:21:58 (1936665): run_atlas exited; CPU time 23994.909145
06:21:58 (1936665): called boinc_finish(0)

</stderr_txt>
]]>

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