Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:46:36 (4101582): wrapper (7.7.26015): starting
18:46:36 (4101582): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 18:46:36] Arguments: --nthreads 3
[2025-10-13 18:46:36] Threads: 3
[2025-10-13 18:46:36] Checking for CVMFS
[2025-10-13 18:46:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:46:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:46:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:46:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:46:36] 2.9.2.0 2254445 6118 86780 151667 2 57 30408694 36864000 0 130560 0 4858400 99.991 210610 799 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 18:46:36] CVMFS is ok
[2025-10-13 18:46:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:46:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:46:36] Further information can be found at the LHC@home message board.
[2025-10-13 18:46:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:46:36] Checking for apptainer binary...
[2025-10-13 18:46:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:46:36] Running /usr/bin/apptainer --version
[2025-10-13 18:46:36] apptainer version 1.4.1-1.1
[2025-10-13 18:46:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:46:36] atlasA230
[2025-10-13 18:46:36] apptainer works
[2025-10-13 18:46:36] Set ATHENA_PROC_NUMBER=3
[2025-10-13 18:46:36] Set ATHENA_CORE_NUMBER=3
[2025-10-13 18:46:36] Starting ATLAS job with PandaID=6841124626
[2025-10-13 18:46:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:09:08]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:09:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 20:09:08] ANSI_COLOR="0;31"
[2025-10-13 20:09:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 20:09:08] HOME_URL="https://www.centos.org/"
[2025-10-13 20:09:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 20:09:08] 
[2025-10-13 20:09:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 20:09:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 20:09:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 20:09:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 20:09:08] 
[2025-10-13 20:09:08] 2025-10-13 18:08:36,990 | INFO     | ***************************************
[2025-10-13 20:09:08] 2025-10-13 18:08:37,493 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | INFO     | sufficient remaining disk space (330269982720 B)
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | INFO     | update_server=False
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 20:09:08] 2025-10-13 18:08:37,505 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:09:08] 2025-10-13 18:08:37,506 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:09:08] 2025-10-13 18:08:37,606 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 20:09:08] 2025-10-13 18:08:37,607 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 20:09:08] 2025-10-13 18:08:37,607 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 20:09:08] 2025-10-13 18:08:37,607 | INFO     | will abort loop
[2025-10-13 20:09:08] 2025-10-13 18:08:37,898 | INFO     | all payload control threads have been joined
[2025-10-13 20:09:08] 2025-10-13 18:08:38,442 | INFO     | all data control threads have been joined
[2025-10-13 20:09:08] 2025-10-13 18:08:38,511 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:38,511 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:38,612 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:38,904 | INFO     | [payload] control thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:38,945 | INFO     | all job control threads have been joined
[2025-10-13 20:09:08] 2025-10-13 18:08:39,358 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,390 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,421 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,438 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:09:08] 2025-10-13 18:08:39,448 | INFO     | [data] control thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,507 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,554 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,851 | INFO     | [job] validate thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,950 | INFO     | [job] control thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,963 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:39,969 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:40,094 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:43,445 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:09:08] 2025-10-13 18:08:49,084 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:09:08] 2025-10-13 18:08:49,497 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140172644529984)>', '<ExcThread(monitor, started 140172012279552)>']
[2025-10-13 20:09:08] 2025-10-13 18:08:54,500 | INFO     | all workflow threads have been joined
[2025-10-13 20:09:08] 2025-10-13 18:08:54,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:09:08] 2025-10-13 18:08:54,500 | INFO     | traces error code: 0
[2025-10-13 20:09:08] 2025-10-13 18:08:54,500 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:09:08] 2025-10-13 18:09:08,657 | INFO     | PID=4105299 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 20:09:08] 2025-10-13 18:09:08,657 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 20:09:08] 2025-10-13 18:09:08,657 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:09:08] 2025-10-13 18:09:08,657 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:09:08] 2025-10-13 18:09:08,658 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:09:08] 2025-10-13 18:09:08,658 | INFO     | [monitor] control thread has ended
[2025-10-13 20:09:08] 2025-10-13 18:09:08,713 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:09:08] 2025-10-13 18:09:08,715 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:09:08] 2025-10-13 18:09:08,717 [wrapper] pilotpid: 4105299
[2025-10-13 20:09:08] 2025-10-13 18:09:08,720 [wrapper] Pilot exit status: 0
[2025-10-13 20:09:08] 2025-10-13 18:09:08,727 [wrapper] pandaids: 6841124626
[2025-10-13 20:09:08] 2025-10-13 18:09:08,743 [wrapper] cleanup supervisor_pilot 4123726 4105300
[2025-10-13 20:09:08] 2025-10-13 18:09:08,745 [wrapper] Test setup, not cleaning
[2025-10-13 20:09:08] 2025-10-13 18:09:08,748 [wrapper] apfmon messages muted
[2025-10-13 20:09:08] 2025-10-13 18:09:08,750 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:09:08] 2025-10-13 18:09:08,752 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:09:08]  *** Error codes and diagnostics ***
[2025-10-13 20:09:08]     "exeErrorCode": 0,
[2025-10-13 20:09:08]     "exeErrorDiag": "",
[2025-10-13 20:09:08]     "pilotErrorCode": 0,
[2025-10-13 20:09:08]     "pilotErrorDiag": "",
[2025-10-13 20:09:08]  *** Listing of results directory ***
[2025-10-13 20:09:08] total 414856
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      5112 Oct 13 04:00 queuedata.json
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc    557409 Oct 13 04:00 pilot3.tar.gz
[2025-10-13 20:09:08] -rwx------ 1 boinc boinc     36292 Oct 13 04:01 runpilot2-wrapper.sh
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:09:08] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:46 run_atlas
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:46 job.xml
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc 220355901 Oct 13 18:46 EVNT.46676267._004375.pool.root.1
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc    569678 Oct 13 18:46 input.tar.gz
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:46 start_atlas.sh
[2025-10-13 20:09:08] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:46 shared
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:46 boinc_setup_complete
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      6442 Oct 13 18:46 init_data.xml
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:46 boinc_lockfile
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:46 pandaJob.out
[2025-10-13 20:09:08] -rw------- 1 boinc boinc    972783 Oct 13 18:46 agis_schedconf.cvmfs.json
[2025-10-13 20:09:08] -rw------- 1 boinc boinc   1560580 Oct 13 18:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:09:08] drwx------ 5 boinc boinc      4096 Oct 13 18:46 pilot3
[2025-10-13 20:09:08] -rw------- 1 boinc boinc 198625623 Oct 13 20:08 HITS.46676269._094493.pool.root.1
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:08 boinc_task_state.xml
[2025-10-13 20:09:08] -rw------- 1 boinc boinc      1018 Oct 13 20:08 memory_monitor_summary.json
[2025-10-13 20:09:08] -rw------- 1 boinc boinc    247058 Oct 13 20:08 log.46676269._094493.job.log.tgz.1
[2025-10-13 20:09:08] -rw------- 1 boinc boinc      7782 Oct 13 20:08 heartbeat.json
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:08 boinc_mmap_file
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:08 wrapper_checkpoint.txt
[2025-10-13 20:09:08] -rw------- 1 boinc boinc       747 Oct 13 20:09 pilotlog.txt
[2025-10-13 20:09:08] -rw------- 1 boinc boinc        95 Oct 13 20:09 pilot_heartbeat.json
[2025-10-13 20:09:08] -rw------- 1 boinc boinc    722835 Oct 13 20:09 log.46676269._094493.job.log.1
[2025-10-13 20:09:08] -rw------- 1 boinc boinc       357 Oct 13 20:09 output.list
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:09 runtime_log
[2025-10-13 20:09:08] -rw------- 1 boinc boinc    993280 Oct 13 20:09 result.tar.gz
[2025-10-13 20:09:08] -rw------- 1 boinc boinc       661 Oct 13 20:09 xxzKDmo3MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0QmNDmKcqbzm.diag
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      8792 Oct 13 20:09 runtime_log.err
[2025-10-13 20:09:08] -rw-r--r-- 1 boinc boinc      8741 Oct 13 20:09 stderr.txt
[2025-10-13 20:09:08] HITS file was successfully produced:
[2025-10-13 20:09:08] -rw------- 1 boinc boinc 198625623 Oct 13 20:08 shared/HITS.pool.root.1
[2025-10-13 20:09:08]  *** Contents of shared directory: ***
[2025-10-13 20:09:08] total 410720
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc 220355901 Oct 13 18:46 ATLAS.root_0
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc    569678 Oct 13 18:46 input.tar.gz
[2025-10-13 20:09:08] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:46 start_atlas.sh
[2025-10-13 20:09:08] -rw------- 1 boinc boinc 198625623 Oct 13 20:08 HITS.pool.root.1
[2025-10-13 20:09:08] -rw------- 1 boinc boinc    993280 Oct 13 20:09 result.tar.gz
20:09:10 (4101582): run_atlas exited; CPU time 13979.555852
20:09:10 (4101582): called boinc_finish(0)

</stderr_txt>
]]>

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