Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:50:35 (6871): wrapper (7.7.26015): starting
02:50:35 (6871): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 02:50:36] Arguments: --nthreads 12
[2025-10-13 02:50:36] Threads: 12
[2025-10-13 02:50:36] Checking for CVMFS
[2025-10-13 02:50:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:50:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:50:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:50:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:50:36] 2.11.2.0 6893 53897 86556 151652 2 56 13421811 20275200 1 130560 0 30519958 99.957 2544897 28031 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:50:36] CVMFS is ok
[2025-10-13 02:50:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:50:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:50:36] Further information can be found at the LHC@home message board.
[2025-10-13 02:50:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:50:36] Checking for apptainer binary...
[2025-10-13 02:50:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:50:36] Running /usr/bin/apptainer --version
[2025-10-13 02:50:36] apptainer version 1.3.2-1.el7
[2025-10-13 02:50:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:50:37] c-205-3.aglt2.org
[2025-10-13 02:50:37] apptainer works
[2025-10-13 02:50:37] Set ATHENA_PROC_NUMBER=12
[2025-10-13 02:50:37] Set ATHENA_CORE_NUMBER=12
[2025-10-13 02:50:37] Starting ATLAS job with PandaID=6840970150
[2025-10-13 02:50:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:03:05]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:03:05] 2025-10-13 08:01:53,399 | INFO     | stage-out finished correctly
[2025-10-13 04:03:05] 2025-10-13 08:01:55,374 | INFO     | time since job start (4263s) is within the limit (172800.0s)
[2025-10-13 04:03:05] 2025-10-13 08:01:56,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:03:05] 2025-10-13 08:01:57,379 | INFO     | time since job start (4265s) is within the limit (172800.0s)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,517 | WARNING  | process 16956 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 04:03:05] 2025-10-13 08:01:57,517 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970150/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,518 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970150/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,518 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 04:03:05] 2025-10-13 08:01:57,519 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 04:03:05] 2025-10-13 08:01:57,519 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3798738 B
[2025-10-13 04:03:05] 2025-10-13 08:01:57,519 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15544 B
[2025-10-13 04:03:05] 2025-10-13 08:01:57,519 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:03:05] 2025-10-13 08:01:57,536 | INFO     | sufficient remaining disk space (29490151424 B)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,537 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,538 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6840970150: 4095534 B (within 2537553920 B limit)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,538 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6840970150/HITS.46676269._092570.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,538 | INFO     | total size of present files: 0 B (workdir size: 4095534 B)
[2025-10-13 04:03:05] 2025-10-13 08:01:57,538 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6840970150/HITS.46676269._092570.pool.root.1 since it does not exist
[2025-10-13 04:03:05] 2025-10-13 08:01:57,631 | INFO     | number of running child processes to parent process 16956: 1
[2025-10-13 04:03:05] 2025-10-13 08:01:57,631 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:03:05] 2025-10-13 08:01:58,776 | INFO     | job 6840970150 has state=finished
[2025-10-13 04:03:05] 2025-10-13 08:01:58,776 | INFO     | preparing for final server update for job 6840970150 in state='finished'
[2025-10-13 04:03:05] 2025-10-13 08:01:58,777 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:03:05] 2025-10-13 08:01:58,777 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:03:05] 2025-10-13 08:01:58,777 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:03:05] 2025-10-13 08:01:58,777 | INFO     | job 6840970150 has finished - writing final server update
[2025-10-13 04:03:05] 2025-10-13 08:01:58,778 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:03:05] 2025-10-13 08:01:58,778 | INFO     | executing command: lscpu
[2025-10-13 04:03:05] 2025-10-13 08:01:58,804 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:03:05] 2025-10-13 08:01:59,385 | INFO     | time since job start (4267s) is within the limit (172800.0s)
[2025-10-13 04:03:05] 2025-10-13 08:02:00,134 | INFO     | monitor loop #319: job 0:6840970150 is in state 'finished'
[2025-10-13 04:03:05] 2025-10-13 08:02:00,135 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:03:05] 2025-10-13 08:02:01,390 | INFO     | time since job start (4269s) is within the limit (172800.0s)
[2025-10-13 04:03:05] 2025-10-13 08:02:02,638 | INFO     | monitor loop #320: job 0:6840970150 is in state 'finished'
[2025-10-13 04:03:05] 2025-10-13 08:02:02,638 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,395 | INFO     | time since job start (4271s) is within the limit (172800.0s)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,485 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 04:03:05] 2025-10-13 08:02:03,488 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1751.25
[2025-10-13 04:03:05] 2025-10-13 08:02:03,491 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840970150/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,492 | INFO     | extracted standard info from prmon json
[2025-10-13 04:03:05] 2025-10-13 08:02:03,492 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:03:05] 2025-10-13 08:02:03,492 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:03:05] 2025-10-13 08:02:03,493 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:03:05] 2025-10-13 08:02:03,493 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:03:05] 2025-10-13 08:02:03,494 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:03:05] 2025-10-13 08:02:03,495 | INFO     | sum of square deviations: 77515872.0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,495 | INFO     | sum of deviations: -6541257163.999999
[2025-10-13 04:03:05] 2025-10-13 08:02:03,495 | INFO     | mean x: 1760340477.0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,495 | INFO     | mean y: 2757805.380952381
[2025-10-13 04:03:05] 2025-10-13 08:02:03,495 | INFO     | -- intersect: 148550912643.34015
[2025-10-13 04:03:05] 2025-10-13 08:02:03,496 | INFO     | intersect: 148550912643.34015
[2025-10-13 04:03:05] 2025-10-13 08:02:03,496 | INFO     | chi2: 0.05455317799175475
[2025-10-13 04:03:05] 2025-10-13 08:02:03,496 | INFO     | -- intersect: 148550912643.34015
[2025-10-13 04:03:05] 2025-10-13 08:02:03,496 | INFO     | current memory leak: -84.39 B/s (using 63 data points, chi2=0.05)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,496 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | ..............................
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . Timing measurements:
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . get job = 0 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . initial setup = 2 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . payload setup = 7 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . stage-in = 0 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . payload execution = 4232 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,497 | INFO     | . stage-out = 0 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,498 | INFO     | . log creation = 0 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,498 | INFO     | ..............................
[2025-10-13 04:03:05] 2025-10-13 08:02:03,582 | INFO     | 
[2025-10-13 04:03:05] 2025-10-13 08:02:03,582 | INFO     | job summary report
[2025-10-13 04:03:05] 2025-10-13 08:02:03,582 | INFO     | --------------------------------------------------
[2025-10-13 04:03:05] 2025-10-13 08:02:03,582 | INFO     | PanDA job id: 6840970150
[2025-10-13 04:03:05] 2025-10-13 08:02:03,582 | INFO     | task id: 46676269
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | errors: (none)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | pilot state: finished 
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | transexitcode: 0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | exeerrorcode: 0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | exeerrordiag: 
[2025-10-13 04:03:05] 2025-10-13 08:02:03,583 | INFO     | exitcode: 0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | exitmsg: OK
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | cpuconsumptiontime: 45417 s
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | nevents: 400
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | neventsw: 0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | pid: 16956
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | pgrp: 16956
[2025-10-13 04:03:05] 2025-10-13 08:02:03,584 | INFO     | corecount: 12
[2025-10-13 04:03:05] 2025-10-13 08:02:03,585 | INFO     | event service: False
[2025-10-13 04:03:05] 2025-10-13 08:02:03,585 | INFO     | sizes: {0: 2348684, 1: 2348883, 5: 2349145, 11: 2349201, 4243: 2375096, 4245: 2384094, 4248: 2384278, 4255: 2384596}
[2025-10-13 04:03:05] 2025-10-13 08:02:03,585 | INFO     | --------------------------------------------------
[2025-10-13 04:03:05] 2025-10-13 08:02:03,585 | INFO     | 
[2025-10-13 04:03:05] 2025-10-13 08:02:03,585 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:03:05] 2025-10-13 08:02:03,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,612 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:03:05] 2025-10-13 08:02:03,613 | INFO     | job 6840970150 has completed (purged errors)
[2025-10-13 04:03:05] 2025-10-13 08:02:03,614 | INFO     | overall cleanup function is called
[2025-10-13 04:03:05] 2025-10-13 08:02:04,621 | INFO     | --- collectZombieJob: --- 10, [16956]
[2025-10-13 04:03:05] 2025-10-13 08:02:04,621 | INFO     | zombie collector waiting for pid 16956
[2025-10-13 04:03:05] 2025-10-13 08:02:04,622 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:03:05] 2025-10-13 08:02:04,622 | INFO     | collected zombie processes
[2025-10-13 04:03:05] 2025-10-13 08:02:04,622 | INFO     | will attempt to kill all subprocesses of pid=16956
[2025-10-13 04:03:05] 2025-10-13 08:02:04,716 | INFO     | process IDs to be killed: [16956] (in reverse order)
[2025-10-13 04:03:05] 2025-10-13 08:02:04,768 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:03:05] 2025-10-13 08:02:04,768 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:03:05] 2025-10-13 08:02:04,772 | INFO     | did not find any defunct processes belonging to 16956
[2025-10-13 04:03:05] 2025-10-13 08:02:04,775 | INFO     | did not find any defunct processes belonging to 16956
[2025-10-13 04:03:05] 2025-10-13 08:02:04,775 | INFO     | ready for new job
[2025-10-13 04:03:05] 2025-10-13 08:02:04,775 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:03:05] 2025-10-13 08:02:04,777 | INFO     | ***************************************
[2025-10-13 04:03:05] 2025-10-13 08:02:04,777 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:03:05] 2025-10-13 08:02:04,777 | INFO     | ***************************************
[2025-10-13 04:03:05] 2025-10-13 08:02:04,777 | INFO     | 
[2025-10-13 04:03:05] 2025-10-13 08:02:04,778 | INFO     | architecture information:
[2025-10-13 04:03:05] 2025-10-13 08:02:04,778 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:03:05] 2025-10-13 08:02:04,794 | INFO     | cat /etc/os-release:
[2025-10-13 04:03:05] NAME="CentOS Linux"
[2025-10-13 04:03:05] VERSION="7 (Core)"
[2025-10-13 04:03:05] ID="centos"
[2025-10-13 04:03:05] ID_LIKE="rhel fedora"
[2025-10-13 04:03:05] VERSION_ID="7"
[2025-10-13 04:03:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:03:05] ANSI_COLOR="0;31"
[2025-10-13 04:03:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:03:05] HOME_URL="https://www.centos.org/"
[2025-10-13 04:03:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:03:05] 
[2025-10-13 04:03:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:03:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:03:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:03:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:03:05] 
[2025-10-13 04:03:05] 2025-10-13 08:02:04,794 | INFO     | ***************************************
[2025-10-13 04:03:05] 2025-10-13 08:02:05,297 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:03:05] 2025-10-13 08:02:05,314 | INFO     | sufficient remaining disk space (29495394304 B)
[2025-10-13 04:03:05] 2025-10-13 08:02:05,314 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:03:05] 2025-10-13 08:02:05,315 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:03:05] 2025-10-13 08:02:05,315 | INFO     | update_server=False
[2025-10-13 04:03:05] 2025-10-13 08:02:05,315 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:03:05] 2025-10-13 08:02:05,315 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 04:03:05] 2025-10-13 08:02:05,316 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:03:05] 2025-10-13 08:02:05,316 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:03:05] 2025-10-13 08:02:05,316 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:03:05] 2025-10-13 08:02:05,317 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:03:05] 2025-10-13 08:02:06,146 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:03:05] 2025-10-13 08:02:06,147 | INFO     | aborting loop
[2025-10-13 04:03:05] 2025-10-13 08:02:06,320 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:06,322 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:06,326 | INFO     | all data control threads have been joined
[2025-10-13 04:03:05] 2025-10-13 08:02:06,404 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:06,501 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:03:05] 2025-10-13 08:02:06,587 | INFO     | all payload control threads have been joined
[2025-10-13 04:03:05] 2025-10-13 08:02:06,700 | INFO     | all job control threads have been joined
[2025-10-13 04:03:05] 2025-10-13 08:02:07,136 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,148 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,152 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,168 | INFO     | [job] validate thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:03:05] 2025-10-13 08:02:07,329 | INFO     | [data] control thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,377 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,592 | INFO     | [payload] control thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,705 | INFO     | [job] control thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,714 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:07,757 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:08,507 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:11,234 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:15,867 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:03:05] 2025-10-13 08:02:16,872 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:03:05] 2025-10-13 08:02:59,263 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:03:05] 2025-10-13 08:03:00,327 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140350858229568)>', '<ExcThread(monitor, started 140349582333696)>']
[2025-10-13 04:03:05] 2025-10-13 08:03:00,594 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:03:05] 2025-10-13 08:03:00,595 | INFO     | [monitor] control thread has ended
[2025-10-13 04:03:05] 2025-10-13 08:03:05,347 | INFO     | all workflow threads have been joined
[2025-10-13 04:03:05] 2025-10-13 08:03:05,347 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:03:05] 2025-10-13 08:03:05,347 | INFO     | traces error code: 0
[2025-10-13 04:03:05] 2025-10-13 08:03:05,348 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:03:05] 2025-10-13 08:03:05,438 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:03:05] 2025-10-13 08:03:05,442 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:03:05] 2025-10-13 08:03:05,446 [wrapper] pilotpid: 10559
[2025-10-13 04:03:05] 2025-10-13 08:03:05,450 [wrapper] Pilot exit status: 0
[2025-10-13 04:03:05] 2025-10-13 08:03:05,466 [wrapper] pandaids: 6840970150
[2025-10-13 04:03:05] 2025-10-13 08:03:05,516 [wrapper] cleanup supervisor_pilot 21602 10560
[2025-10-13 04:03:05] 2025-10-13 08:03:05,520 [wrapper] Test setup, not cleaning
[2025-10-13 04:03:05] 2025-10-13 08:03:05,524 [wrapper] apfmon messages muted
[2025-10-13 04:03:05] 2025-10-13 08:03:05,528 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:03:05] 2025-10-13 08:03:05,532 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:03:05]  *** Error codes and diagnostics ***
[2025-10-13 04:03:05]     "exeErrorCode": 0,
[2025-10-13 04:03:05]     "exeErrorDiag": "",
[2025-10-13 04:03:05]     "pilotErrorCode": 0,
[2025-10-13 04:03:05]     "pilotErrorDiag": "",
[2025-10-13 04:03:05]  *** Listing of results directory ***
[2025-10-13 04:03:05] total 407612
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 19:51 pilot3.tar.gz
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 19:53 queuedata.json
[2025-10-13 04:03:05] -rwx------ 1 boincer umatlas     36292 Oct 12 19:54 runpilot2-wrapper.sh
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:03:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:50 run_atlas
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:50 job.xml
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas 219965991 Oct 13 02:50 EVNT.46676267._004672.pool.root.1
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:50 start_atlas.sh
[2025-10-13 04:03:05] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:50 shared
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 02:50 input.tar.gz
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:50 boinc_lockfile
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 02:50 pandaJob.out
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas    972849 Oct 13 02:50 agis_schedconf.cvmfs.json
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas   1560580 Oct 13 02:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:03:05] drwx------ 5 boincer umatlas      4096 Oct 13 02:50 pilot3
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas 191541452 Oct 13 04:01 HITS.46676269._092570.pool.root.1
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas       529 Oct 13 04:01 boinc_task_state.xml
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas        95 Oct 13 04:01 pilot_heartbeat.json
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas      1048 Oct 13 04:01 memory_monitor_summary.json
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas    368482 Oct 13 04:01 log.46676269._092570.job.log.tgz.1
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas      7855 Oct 13 04:02 heartbeat.json
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 04:02 init_data.xml
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:02 boinc_mmap_file
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas        27 Oct 13 04:02 wrapper_checkpoint.txt
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas      4624 Oct 13 04:03 pilotlog.txt
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas    624142 Oct 13 04:03 log.46676269._092570.job.log.1
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas       357 Oct 13 04:03 output.list
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:03 runtime_log
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas   1013760 Oct 13 04:03 result.tar.gz
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas       658 Oct 13 04:03 Xz7KDmo4KS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmn6lNDmFJ8iUm.diag
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas      8700 Oct 13 04:03 runtime_log.err
[2025-10-13 04:03:05] -rw-r--r-- 1 boincer umatlas     22290 Oct 13 04:03 stderr.txt
[2025-10-13 04:03:05] HITS file was successfully produced:
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas 191541452 Oct 13 04:01 shared/HITS.pool.root.1
[2025-10-13 04:03:05]  *** Contents of shared directory: ***
[2025-10-13 04:03:05] total 403440
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas 219965991 Oct 13 02:50 ATLAS.root_0
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:50 start_atlas.sh
[2025-10-13 04:03:05] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 02:50 input.tar.gz
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas 191541452 Oct 13 04:01 HITS.pool.root.1
[2025-10-13 04:03:05] -rw------- 1 boincer umatlas   1013760 Oct 13 04:03 result.tar.gz
04:03:07 (6871): run_atlas exited; CPU time 45393.857769
04:03:07 (6871): called boinc_finish(0)

</stderr_txt>
]]>

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