Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:47:34 (11234): wrapper (7.7.26015): starting
02:47:34 (11234): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:47:34] Arguments: --nthreads 8
[2025-10-13 02:47:34] Threads: 8
[2025-10-13 02:47:34] Checking for CVMFS
[2025-10-13 02:47:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:47:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:47:34] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:47:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:47:34] 2.11.2.0 12825 53959 128372 151652 3 57 17294995 18432001 1833 130560 0 48517831 99.978 2096511 20487 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:47:34] CVMFS is ok
[2025-10-13 02:47:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:47:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:47:34] Further information can be found at the LHC@home message board.
[2025-10-13 02:47:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:47:34] Checking for apptainer binary...
[2025-10-13 02:47:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:47:34] Running /usr/bin/apptainer --version
[2025-10-13 02:47:34] apptainer version 1.3.2-1.el7
[2025-10-13 02:47:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:47:35] c-206-8.aglt2.org
[2025-10-13 02:47:35] apptainer works
[2025-10-13 02:47:35] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:47:35] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:47:35] Starting ATLAS job with PandaID=6840749778
[2025-10-13 02:47:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:51:10]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:51:10] 2025-10-13 09:50:25,469 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:51:10] 2025-10-13 09:50:25,469 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:51:10] 2025-10-13 09:50:25,472 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:51:10] 2025-10-13 09:50:25,472 | INFO     | sum of square deviations: 1808350185.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,473 | INFO     | sum of deviations: 2381638493.9999943
[2025-10-13 05:51:10] 2025-10-13 09:50:25,473 | INFO     | mean x: 1760343550.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,473 | INFO     | mean y: 2467827.4
[2025-10-13 05:51:10] 2025-10-13 09:50:25,473 | INFO     | -- intersect: -2315944832.5546994
[2025-10-13 05:51:10] 2025-10-13 09:50:25,473 | INFO     | intersect: -2315944832.5546994
[2025-10-13 05:51:10] 2025-10-13 09:50:25,474 | INFO     | chi2: 2.1360969873634836
[2025-10-13 05:51:10] 2025-10-13 09:50:25,474 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | sum of deviations: 13878867314.999996
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | mean x: 1760343398.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | mean y: 2479513.902857143
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | -- intersect: -14699405810.635406
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | intersect: -14699405810.635406
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | chi2: 1.3674355015088275
[2025-10-13 05:51:10] 2025-10-13 09:50:25,475 | INFO     | current chi2=1.3674355015088275 (change=35.98439070893454 %)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,476 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | sum of deviations: 13334127463.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | mean x: 1760343245.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | mean y: 2478913.5588235296
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | -- intersect: -15405717295.905119
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | intersect: -15405717295.905119
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | chi2: 1.368439990738875
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | current chi2=1.368439990738875 (change=-0.07345788733282224 %)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,477 | INFO     | right removable region: 169
[2025-10-13 05:51:10] 2025-10-13 09:50:25,478 | INFO     | sum of square deviations: 1661798600.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,478 | INFO     | sum of deviations: -22067127895.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | mean x: 1760343703.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | mean y: 2492916.245714286
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | -- intersect: 23378207418.146786
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | intersect: 23378207418.146786
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | chi2: 0.8423368396453893
[2025-10-13 05:51:10] 2025-10-13 09:50:25,479 | INFO     | current chi2=0.8423368396453893 (change=60.566545216420224 %)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,480 | INFO     | sum of square deviations: 1523386702.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,480 | INFO     | sum of deviations: -18640971395.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,480 | INFO     | mean x: 1760343855.5
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | mean y: 2489087.282352941
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | -- intersect: 21542994463.81495
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | intersect: 21542994463.81495
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | chi2: 0.8258092626810705
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | current chi2=0.8258092626810705 (change=1.962110189942148 %)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | left removable region: 20
[2025-10-13 05:51:10] 2025-10-13 09:50:25,481 | INFO     | sum of square deviations: 1025693650.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,482 | INFO     | sum of deviations: -1912813783.0000005
[2025-10-13 05:51:10] 2025-10-13 09:50:25,482 | INFO     | mean x: 1760343825.0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,482 | INFO     | mean y: 2494942.436241611
[2025-10-13 05:51:10] 2025-10-13 09:50:25,482 | INFO     | -- intersect: 3285356185.926382
[2025-10-13 05:51:10] 2025-10-13 09:50:25,482 | INFO     | intersect: 3285356185.926382
[2025-10-13 05:51:10] 2025-10-13 09:50:25,483 | INFO     | chi2: 0.01933397728988632
[2025-10-13 05:51:10] 2025-10-13 09:50:25,483 | INFO     | -- intersect: 3285356185.926382
[2025-10-13 05:51:10] 2025-10-13 09:50:25,483 | INFO     | current memory leak: -1.86 B/s (using 149 data points, chi2=0.02)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,483 | INFO     | could have reported an average CPU frequency of 2522 MHz (9 samples)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,483 | INFO     | ..............................
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . Timing measurements:
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . get job = 0 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . initial setup = 2 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . payload setup = 4 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . stage-in = 0 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . payload execution = 10927 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . stage-out = 2 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | . log creation = 0 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,484 | INFO     | ..............................
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | 
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | job summary report
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | --------------------------------------------------
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | PanDA job id: 6840749778
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | task id: 46676269
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | errors: (none)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:51:10] 2025-10-13 09:50:25,561 | INFO     | pilot state: finished 
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | transexitcode: 0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | exeerrorcode: 0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | exeerrordiag: 
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | exitcode: 0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | exitmsg: OK
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | cpuconsumptiontime: 82154 s
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | nevents: 400
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | neventsw: 0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | pid: 21717
[2025-10-13 05:51:10] 2025-10-13 09:50:25,562 | INFO     | pgrp: 21717
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | corecount: 8
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | event service: False
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | sizes: {0: 2348856, 1: 2348856, 4: 2349146, 11: 2349174, 10935: 2378253, 10938: 2387251, 10941: 2387435, 10944: 2387693}
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | --------------------------------------------------
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | 
[2025-10-13 05:51:10] 2025-10-13 09:50:25,563 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:51:10] 2025-10-13 09:50:25,578 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,578 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,578 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,578 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,578 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,579 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | job 6840749778 has completed (purged errors)
[2025-10-13 05:51:10] 2025-10-13 09:50:25,580 | INFO     | overall cleanup function is called
[2025-10-13 05:51:10] 2025-10-13 09:50:26,585 | INFO     | --- collectZombieJob: --- 10, [21717]
[2025-10-13 05:51:10] 2025-10-13 09:50:26,586 | INFO     | zombie collector waiting for pid 21717
[2025-10-13 05:51:10] 2025-10-13 09:50:26,586 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:51:10] 2025-10-13 09:50:26,586 | INFO     | collected zombie processes
[2025-10-13 05:51:10] 2025-10-13 09:50:26,586 | INFO     | will attempt to kill all subprocesses of pid=21717
[2025-10-13 05:51:10] 2025-10-13 09:50:26,738 | INFO     | process IDs to be killed: [21717] (in reverse order)
[2025-10-13 05:51:10] 2025-10-13 09:50:26,780 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:51:10] 2025-10-13 09:50:26,780 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:51:10] 2025-10-13 09:50:26,786 | INFO     | did not find any defunct processes belonging to 21717
[2025-10-13 05:51:10] 2025-10-13 09:50:26,791 | INFO     | did not find any defunct processes belonging to 21717
[2025-10-13 05:51:10] 2025-10-13 09:50:26,791 | INFO     | ready for new job
[2025-10-13 05:51:10] 2025-10-13 09:50:26,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:51:10] 2025-10-13 09:50:26,793 | INFO     | ***************************************
[2025-10-13 05:51:10] 2025-10-13 09:50:26,793 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:51:10] 2025-10-13 09:50:26,794 | INFO     | ***************************************
[2025-10-13 05:51:10] 2025-10-13 09:50:26,794 | INFO     | 
[2025-10-13 05:51:10] 2025-10-13 09:50:26,795 | INFO     | architecture information:
[2025-10-13 05:51:10] 2025-10-13 09:50:26,795 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:51:10] 2025-10-13 09:50:26,807 | INFO     | cat /etc/os-release:
[2025-10-13 05:51:10] NAME="CentOS Linux"
[2025-10-13 05:51:10] VERSION="7 (Core)"
[2025-10-13 05:51:10] ID="centos"
[2025-10-13 05:51:10] ID_LIKE="rhel fedora"
[2025-10-13 05:51:10] VERSION_ID="7"
[2025-10-13 05:51:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:51:10] ANSI_COLOR="0;31"
[2025-10-13 05:51:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:51:10] HOME_URL="https://www.centos.org/"
[2025-10-13 05:51:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:51:10] 
[2025-10-13 05:51:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:51:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:51:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:51:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:51:10] 
[2025-10-13 05:51:10] 2025-10-13 09:50:26,807 | INFO     | ***************************************
[2025-10-13 05:51:10] 2025-10-13 09:50:27,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:51:10] 2025-10-13 09:50:27,326 | INFO     | sufficient remaining disk space (27974959104 B)
[2025-10-13 05:51:10] 2025-10-13 09:50:27,327 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:51:10] 2025-10-13 09:50:27,327 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:51:10] 2025-10-13 09:50:27,327 | INFO     | update_server=False
[2025-10-13 05:51:10] 2025-10-13 09:50:27,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:51:10] 2025-10-13 09:50:27,328 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:51:10] 2025-10-13 09:50:27,751 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:51:10] 2025-10-13 09:50:27,899 | INFO     | all data control threads have been joined
[2025-10-13 05:51:10] 2025-10-13 09:50:28,316 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:51:10] 2025-10-13 09:50:28,316 | INFO     | aborting loop
[2025-10-13 05:51:10] 2025-10-13 09:50:28,333 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:28,333 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:28,341 | INFO     | all payload control threads have been joined
[2025-10-13 05:51:10] 2025-10-13 09:50:28,484 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:51:10] 2025-10-13 09:50:28,708 | INFO     | all job control threads have been joined
[2025-10-13 05:51:10] 2025-10-13 09:50:28,750 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:28,751 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:28,905 | INFO     | [data] control thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,166 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,188 | INFO     | [job] validate thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,321 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,346 | INFO     | [payload] control thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,369 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,590 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,714 | INFO     | [job] control thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,756 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:29,886 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:32,489 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:38,185 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:51:10] 2025-10-13 09:50:39,191 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:51:10] 2025-10-13 09:50:57,991 | INFO     | PID=14937 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:51:10] 2025-10-13 09:50:57,991 | INFO     | .. there are 3 such processes running
[2025-10-13 05:51:10] 2025-10-13 09:50:57,992 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:51:10] 2025-10-13 09:50:57,992 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:51:10] 2025-10-13 09:50:57,992 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:51:10] 2025-10-13 09:51:03,784 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:51:10] 2025-10-13 09:51:05,546 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140487187953472)>', '<ExcThread(monitor, started 140486736066304)>']
[2025-10-13 05:51:10] 2025-10-13 09:51:06,029 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:51:10] 2025-10-13 09:51:06,029 | INFO     | [monitor] control thread has ended
[2025-10-13 05:51:10] 2025-10-13 09:51:10,572 | INFO     | all workflow threads have been joined
[2025-10-13 05:51:10] 2025-10-13 09:51:10,572 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:51:10] 2025-10-13 09:51:10,573 | INFO     | traces error code: 0
[2025-10-13 05:51:10] 2025-10-13 09:51:10,573 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:51:10] 2025-10-13 09:51:10,673 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:51:10] 2025-10-13 09:51:10,675 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:51:10] 2025-10-13 09:51:10,677 [wrapper] pilotpid: 14937
[2025-10-13 05:51:10] 2025-10-13 09:51:10,679 [wrapper] Pilot exit status: 0
[2025-10-13 05:51:10] 2025-10-13 09:51:10,688 [wrapper] pandaids: 6840749778
[2025-10-13 05:51:10] 2025-10-13 09:51:10,731 [wrapper] cleanup supervisor_pilot  3585 14938
[2025-10-13 05:51:10] 2025-10-13 09:51:10,733 [wrapper] Test setup, not cleaning
[2025-10-13 05:51:10] 2025-10-13 09:51:10,736 [wrapper] apfmon messages muted
[2025-10-13 05:51:10] 2025-10-13 09:51:10,738 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:51:10] 2025-10-13 09:51:10,741 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:51:10]  *** Error codes and diagnostics ***
[2025-10-13 05:51:10]     "exeErrorCode": 0,
[2025-10-13 05:51:10]     "exeErrorDiag": "",
[2025-10-13 05:51:10]     "pilotErrorCode": 0,
[2025-10-13 05:51:10]     "pilotErrorDiag": "",
[2025-10-13 05:51:10]  *** Listing of results directory ***
[2025-10-13 05:51:10] total 412832
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 16:55 pilot3.tar.gz
[2025-10-13 05:51:10] -rwx------ 1 boincer umatlas     36292 Oct 12 16:56 runpilot2-wrapper.sh
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 16:56 queuedata.json
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:51:10] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:47 run_atlas
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:47 job.xml
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas 220331241 Oct 13 02:47 EVNT.46676267._004758.pool.root.1
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:47 start_atlas.sh
[2025-10-13 05:51:10] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:47 shared
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas    569675 Oct 13 02:47 input.tar.gz
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:47 boinc_lockfile
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 02:47 pandaJob.out
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas    972849 Oct 13 02:47 agis_schedconf.cvmfs.json
[2025-10-13 05:51:10] drwx------ 5 boincer umatlas      4096 Oct 13 02:47 pilot3
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 05:45 init_data.xml
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas 194598560 Oct 13 05:49 HITS.46676269._089206.pool.root.1
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas       530 Oct 13 05:49 boinc_task_state.xml
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas      1067 Oct 13 05:50 memory_monitor_summary.json
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas   1560580 Oct 13 05:50 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas    415050 Oct 13 05:50 log.46676269._089206.job.log.tgz.1
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas      7854 Oct 13 05:50 heartbeat.json
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas        95 Oct 13 05:50 pilot_heartbeat.json
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 05:50 boinc_mmap_file
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas        28 Oct 13 05:50 wrapper_checkpoint.txt
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas      4893 Oct 13 05:51 pilotlog.txt
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas   1537951 Oct 13 05:51 log.46676269._089206.job.log.1
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas       357 Oct 13 05:51 output.list
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas       620 Oct 13 05:51 runtime_log
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas   1976320 Oct 13 05:51 result.tar.gz
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 05:51 runtime_log.err
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas       661 Oct 13 05:51 kaJLDmeIIS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmpWlNDm510TQn.diag
[2025-10-13 05:51:10] -rw-r--r-- 1 boincer umatlas     20861 Oct 13 05:51 stderr.txt
[2025-10-13 05:51:10] HITS file was successfully produced:
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas 194598560 Oct 13 05:49 shared/HITS.pool.root.1
[2025-10-13 05:51:10]  *** Contents of shared directory: ***
[2025-10-13 05:51:10] total 407720
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas 220331241 Oct 13 02:47 ATLAS.root_0
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:47 start_atlas.sh
[2025-10-13 05:51:10] -rw-r--r-- 2 boincer umatlas    569675 Oct 13 02:47 input.tar.gz
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas 194598560 Oct 13 05:49 HITS.pool.root.1
[2025-10-13 05:51:10] -rw------- 1 boincer umatlas   1976320 Oct 13 05:51 result.tar.gz
05:51:11 (11234): run_atlas exited; CPU time 82298.966615
05:51:11 (11234): called boinc_finish(0)

</stderr_txt>
]]>

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