Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:44:03 (20385): wrapper (7.7.26015): starting
02:44:03 (20385): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:44:03] Arguments: --nthreads 8
[2025-10-13 02:44:03] Threads: 8
[2025-10-13 02:44:03] Checking for CVMFS
[2025-10-13 02:44:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:44:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:44:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:44:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:44:04] 2.11.2.0 2797 2010 66864 151652 2 56 14328116 20275201 1 130560 0 1433227 99.990 70253 35935 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:44:04] CVMFS is ok
[2025-10-13 02:44:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:44:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:44:04] Further information can be found at the LHC@home message board.
[2025-10-13 02:44:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:44:04] Checking for apptainer binary...
[2025-10-13 02:44:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:44:04] Running /usr/bin/apptainer --version
[2025-10-13 02:44:04] apptainer version 1.3.2-1.el7
[2025-10-13 02:44:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:44:05] c-204-11.aglt2.org
[2025-10-13 02:44:05] apptainer works
[2025-10-13 02:44:05] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:44:05] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:44:05] Starting ATLAS job with PandaID=6841124585
[2025-10-13 02:44:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:49:40]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:49:40] 2025-10-13 08:48:35,423 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:49:40] 2025-10-13 08:48:35,423 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:49:40] 2025-10-13 08:48:35,423 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:49:40] 2025-10-13 08:48:35,423 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:49:40] 2025-10-13 08:48:35,426 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:49:40] 2025-10-13 08:48:35,426 | INFO     | sum of square deviations: 563026370.5
[2025-10-13 04:49:40] 2025-10-13 08:48:35,427 | INFO     | sum of deviations: -8446518689.499993
[2025-10-13 04:49:40] 2025-10-13 08:48:35,427 | INFO     | mean x: 1760341583.5
[2025-10-13 04:49:40] 2025-10-13 08:48:35,427 | INFO     | mean y: 2522864.9098360655
[2025-10-13 04:49:40] 2025-10-13 08:48:35,427 | INFO     | -- intersect: 26411158168.67446
[2025-10-13 04:49:40] 2025-10-13 08:48:35,427 | INFO     | intersect: 26411158168.67446
[2025-10-13 04:49:40] 2025-10-13 08:48:35,428 | INFO     | chi2: 2.421215036038937
[2025-10-13 04:49:40] 2025-10-13 08:48:35,428 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,428 | INFO     | sum of deviations: 450425891.0000001
[2025-10-13 04:49:40] 2025-10-13 08:48:35,428 | INFO     | mean x: 1760341431.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,429 | INFO     | mean y: 2542644.2564102565
[2025-10-13 04:49:40] 2025-10-13 08:48:35,429 | INFO     | -- intersect: -1594130330.9079213
[2025-10-13 04:49:40] 2025-10-13 08:48:35,429 | INFO     | intersect: -1594130330.9079213
[2025-10-13 04:49:40] 2025-10-13 08:48:35,429 | INFO     | chi2: 1.5814897809979187
[2025-10-13 04:49:40] 2025-10-13 08:48:35,429 | INFO     | current chi2=1.5814897809979187 (change=34.681977541936675 %)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,430 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,430 | INFO     | sum of deviations: 755932923.0000011
[2025-10-13 04:49:40] 2025-10-13 08:48:35,430 | INFO     | mean x: 1760341278.5
[2025-10-13 04:49:40] 2025-10-13 08:48:35,430 | INFO     | mean y: 2543410.0714285714
[2025-10-13 04:49:40] 2025-10-13 08:48:35,430 | INFO     | -- intersect: -3052252950.433991
[2025-10-13 04:49:40] 2025-10-13 08:48:35,431 | INFO     | intersect: -3052252950.433991
[2025-10-13 04:49:40] 2025-10-13 08:48:35,431 | INFO     | chi2: 1.583215130976807
[2025-10-13 04:49:40] 2025-10-13 08:48:35,431 | INFO     | current chi2=1.583215130976807 (change=-0.10909649873296029 %)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,431 | INFO     | right removable region: 111
[2025-10-13 04:49:40] 2025-10-13 08:48:35,431 | INFO     | sum of square deviations: 496597218.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,432 | INFO     | sum of deviations: -26113484266.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,432 | INFO     | mean x: 1760341736.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,432 | INFO     | mean y: 2562633.794871795
[2025-10-13 04:49:40] 2025-10-13 08:48:35,432 | INFO     | -- intersect: 92569847668.03992
[2025-10-13 04:49:40] 2025-10-13 08:48:35,432 | INFO     | intersect: 92569847668.03992
[2025-10-13 04:49:40] 2025-10-13 08:48:35,433 | INFO     | chi2: 1.0176600273726104
[2025-10-13 04:49:40] 2025-10-13 08:48:35,433 | INFO     | current chi2=1.0176600273726104 (change=57.96903570211246 %)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,433 | INFO     | sum of square deviations: 435610028.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | sum of deviations: -25272664292.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | mean x: 1760341888.5
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | mean y: 2560386.464285714
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | -- intersect: 102131819879.09882
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | intersect: 102131819879.09882
[2025-10-13 04:49:40] 2025-10-13 08:48:35,434 | INFO     | chi2: 0.9977349539943631
[2025-10-13 04:49:40] 2025-10-13 08:48:35,435 | INFO     | current chi2=0.9977349539943631 (change=1.957930236258743 %)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,435 | INFO     | left removable region: 20
[2025-10-13 04:49:40] 2025-10-13 08:48:35,435 | INFO     | sum of square deviations: 233641590.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,435 | INFO     | sum of deviations: -8855366706.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,435 | INFO     | mean x: 1760341858.0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | mean y: 2564180.1208791207
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | -- intersect: 66722160980.12289
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | intersect: 66722160980.12289
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | chi2: 0.09065785495429213
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | -- intersect: 66722160980.12289
[2025-10-13 04:49:40] 2025-10-13 08:48:35,436 | INFO     | current memory leak: -37.90 B/s (using 91 data points, chi2=0.09)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,437 | INFO     | could have reported an average CPU frequency of 1943 MHz (8 samples)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,437 | INFO     | ..............................
[2025-10-13 04:49:40] 2025-10-13 08:48:35,437 | INFO     | . Timing measurements:
[2025-10-13 04:49:40] 2025-10-13 08:48:35,437 | INFO     | . get job = 0 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,437 | INFO     | . initial setup = 2 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | . payload setup = 7 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | . stage-in = 0 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | . payload execution = 7412 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | . stage-out = 0 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | . log creation = 0 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,438 | INFO     | ..............................
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | 
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | job summary report
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | --------------------------------------------------
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | PanDA job id: 6841124585
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | task id: 46676269
[2025-10-13 04:49:40] 2025-10-13 08:48:35,532 | INFO     | errors: (none)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | pilot state: finished 
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | transexitcode: 0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | exeerrorcode: 0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | exeerrordiag: 
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | exitcode: 0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,533 | INFO     | exitmsg: OK
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | cpuconsumptiontime: 54808 s
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | nevents: 400
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | neventsw: 0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | pid: 31474
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | pgrp: 31474
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | corecount: 8
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | event service: False
[2025-10-13 04:49:40] 2025-10-13 08:48:35,534 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7423: 2376565, 7425: 2385563, 7427: 2385747, 7436: 2385941}
[2025-10-13 04:49:40] 2025-10-13 08:48:35,535 | INFO     | --------------------------------------------------
[2025-10-13 04:49:40] 2025-10-13 08:48:35,535 | INFO     | 
[2025-10-13 04:49:40] 2025-10-13 08:48:35,535 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:49:40] 2025-10-13 08:48:35,561 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,562 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,562 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,562 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,563 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,563 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,563 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,563 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,563 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,564 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,564 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,564 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,564 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,564 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,565 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,565 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,565 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,565 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,565 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,566 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:49:40] 2025-10-13 08:48:35,566 | INFO     | job 6841124585 has completed (purged errors)
[2025-10-13 04:49:40] 2025-10-13 08:48:35,566 | INFO     | overall cleanup function is called
[2025-10-13 04:49:40] 2025-10-13 08:48:36,570 | INFO     | --- collectZombieJob: --- 10, [31474]
[2025-10-13 04:49:40] 2025-10-13 08:48:36,570 | INFO     | zombie collector waiting for pid 31474
[2025-10-13 04:49:40] 2025-10-13 08:48:36,570 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:49:40] 2025-10-13 08:48:36,571 | INFO     | collected zombie processes
[2025-10-13 04:49:40] 2025-10-13 08:48:36,571 | INFO     | will attempt to kill all subprocesses of pid=31474
[2025-10-13 04:49:40] 2025-10-13 08:48:36,664 | INFO     | process IDs to be killed: [31474] (in reverse order)
[2025-10-13 04:49:40] 2025-10-13 08:48:36,721 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:49:40] 2025-10-13 08:48:36,721 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:49:40] 2025-10-13 08:48:36,725 | INFO     | did not find any defunct processes belonging to 31474
[2025-10-13 04:49:40] 2025-10-13 08:48:36,728 | INFO     | did not find any defunct processes belonging to 31474
[2025-10-13 04:49:40] 2025-10-13 08:48:36,729 | INFO     | ready for new job
[2025-10-13 04:49:40] 2025-10-13 08:48:36,729 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:49:40] 2025-10-13 08:48:36,730 | INFO     | ***************************************
[2025-10-13 04:49:40] 2025-10-13 08:48:36,731 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:49:40] 2025-10-13 08:48:36,731 | INFO     | ***************************************
[2025-10-13 04:49:40] 2025-10-13 08:48:36,731 | INFO     | 
[2025-10-13 04:49:40] 2025-10-13 08:48:36,731 | INFO     | architecture information:
[2025-10-13 04:49:40] 2025-10-13 08:48:36,732 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:49:40] 2025-10-13 08:48:36,749 | INFO     | cat /etc/os-release:
[2025-10-13 04:49:40] NAME="CentOS Linux"
[2025-10-13 04:49:40] VERSION="7 (Core)"
[2025-10-13 04:49:40] ID="centos"
[2025-10-13 04:49:40] ID_LIKE="rhel fedora"
[2025-10-13 04:49:40] VERSION_ID="7"
[2025-10-13 04:49:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:49:40] ANSI_COLOR="0;31"
[2025-10-13 04:49:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:49:40] HOME_URL="https://www.centos.org/"
[2025-10-13 04:49:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:49:40] 
[2025-10-13 04:49:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:49:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:49:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:49:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:49:40] 
[2025-10-13 04:49:40] 2025-10-13 08:48:36,750 | INFO     | ***************************************
[2025-10-13 04:49:40] 2025-10-13 08:48:37,253 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:49:40] 2025-10-13 08:48:37,274 | INFO     | sufficient remaining disk space (18594398208 B)
[2025-10-13 04:49:40] 2025-10-13 08:48:37,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:49:40] 2025-10-13 08:48:37,275 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:49:40] 2025-10-13 08:48:37,276 | INFO     | update_server=False
[2025-10-13 04:49:40] 2025-10-13 08:48:37,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:49:40] 2025-10-13 08:48:37,276 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:40] 2025-10-13 08:48:37,277 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:49:40] 2025-10-13 08:48:37,277 | INFO     | aborting loop
[2025-10-13 04:49:40] 2025-10-13 08:48:37,422 | INFO     | all data control threads have been joined
[2025-10-13 04:49:40] 2025-10-13 08:48:37,663 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:49:40] 2025-10-13 08:48:37,737 | INFO     | all payload control threads have been joined
[2025-10-13 04:49:40] 2025-10-13 08:48:38,247 | INFO     | all job control threads have been joined
[2025-10-13 04:49:40] 2025-10-13 08:48:38,279 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:49:40] 2025-10-13 08:48:38,280 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,282 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,282 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,428 | INFO     | [data] control thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,505 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,723 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,743 | INFO     | [payload] control thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:38,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,009 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,252 | INFO     | [job] control thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,568 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,570 | INFO     | [job] validate thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,662 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:39,751 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:40,286 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:48:41,665 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:49:40] 2025-10-13 08:49:08,475 | INFO     | PID=24057 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 04:49:40] 2025-10-13 08:49:08,477 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:49:40] 2025-10-13 08:49:08,477 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:49:40] 2025-10-13 08:49:08,477 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:49:40] 2025-10-13 08:49:34,329 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:49:40] 2025-10-13 08:49:34,645 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295262762816)>', '<ExcThread(monitor, started 140294209128192)>']
[2025-10-13 04:49:40] 2025-10-13 08:49:35,593 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:49:40] 2025-10-13 08:49:35,593 | INFO     | [monitor] control thread has ended
[2025-10-13 04:49:40] 2025-10-13 08:49:39,670 | INFO     | all workflow threads have been joined
[2025-10-13 04:49:40] 2025-10-13 08:49:39,671 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:49:40] 2025-10-13 08:49:39,671 | INFO     | traces error code: 0
[2025-10-13 04:49:40] 2025-10-13 08:49:39,672 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:49:40] 2025-10-13 08:49:39,792 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:49:40] 2025-10-13 08:49:39,797 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:49:40] 2025-10-13 08:49:39,801 [wrapper] pilotpid: 24057
[2025-10-13 04:49:40] 2025-10-13 08:49:39,806 [wrapper] Pilot exit status: 0
[2025-10-13 04:49:40] 2025-10-13 08:49:39,822 [wrapper] pandaids: 6841124585
[2025-10-13 04:49:40] 2025-10-13 08:49:39,870 [wrapper] cleanup supervisor_pilot 25149 24058
[2025-10-13 04:49:40] 2025-10-13 08:49:39,875 [wrapper] Test setup, not cleaning
[2025-10-13 04:49:40] 2025-10-13 08:49:39,880 [wrapper] apfmon messages muted
[2025-10-13 04:49:40] 2025-10-13 08:49:39,884 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:49:40] 2025-10-13 08:49:39,888 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:49:40]  *** Error codes and diagnostics ***
[2025-10-13 04:49:40]     "exeErrorCode": 0,
[2025-10-13 04:49:40]     "exeErrorDiag": "",
[2025-10-13 04:49:40]     "pilotErrorCode": 0,
[2025-10-13 04:49:40]     "pilotErrorDiag": "",
[2025-10-13 04:49:40]  *** Listing of results directory ***
[2025-10-13 04:49:40] total 409872
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:58 queuedata.json
[2025-10-13 04:49:40] -rwx------ 1 boincer umatlas     36292 Oct 12 21:59 runpilot2-wrapper.sh
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:49:40] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:44 run_atlas
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:44 job.xml
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas 218206666 Oct 13 02:44 EVNT.46676267._004373.pool.root.1
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:44 start_atlas.sh
[2025-10-13 04:49:40] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:44 shared
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 02:44 input.tar.gz
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:44 boinc_lockfile
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:44 pandaJob.out
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas    972849 Oct 13 02:44 agis_schedconf.cvmfs.json
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas   1560580 Oct 13 02:44 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:49:40] drwx------ 5 boincer umatlas      4096 Oct 13 02:44 pilot3
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas      5909 Oct 13 04:37 init_data.xml
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas 194744350 Oct 13 04:47 HITS.46676269._094452.pool.root.1
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas       529 Oct 13 04:48 boinc_task_state.xml
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas      1051 Oct 13 04:48 memory_monitor_summary.json
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas    374146 Oct 13 04:48 log.46676269._094452.job.log.tgz.1
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas      7854 Oct 13 04:48 heartbeat.json
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas        95 Oct 13 04:49 pilot_heartbeat.json
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:49 boinc_mmap_file
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas        27 Oct 13 04:49 wrapper_checkpoint.txt
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas      4746 Oct 13 04:49 pilotlog.txt
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas   1054156 Oct 13 04:49 log.46676269._094452.job.log.1
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas       357 Oct 13 04:49 output.list
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:49 runtime_log
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas   1443840 Oct 13 04:49 result.tar.gz
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 04:49 runtime_log.err
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas       659 Oct 13 04:49 0nzKDmy1MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmyQmNDm2R99Tm.diag
[2025-10-13 04:49:40] -rw-r--r-- 1 boincer umatlas     20859 Oct 13 04:49 stderr.txt
[2025-10-13 04:49:40] HITS file was successfully produced:
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas 194744350 Oct 13 04:47 shared/HITS.pool.root.1
[2025-10-13 04:49:40]  *** Contents of shared directory: ***
[2025-10-13 04:49:40] total 405272
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas 218206666 Oct 13 02:44 ATLAS.root_0
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:44 start_atlas.sh
[2025-10-13 04:49:40] -rw-r--r-- 2 boincer umatlas    569682 Oct 13 02:44 input.tar.gz
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas 194744350 Oct 13 04:47 HITS.pool.root.1
[2025-10-13 04:49:40] -rw------- 1 boincer umatlas   1443840 Oct 13 04:49 result.tar.gz
04:49:41 (20385): run_atlas exited; CPU time 54812.877795
04:49:41 (20385): called boinc_finish(0)

</stderr_txt>
]]>

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