Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:28:30 (3976112): wrapper (7.7.26015): starting
03:28:30 (3976112): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 03:28:30] Arguments: --nthreads 9
[2025-10-13 03:28:30] Threads: 9
[2025-10-13 03:28:30] Checking for CVMFS
[2025-10-13 03:28:30] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:28:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:28:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:28:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:28:31] 2.13.2.0 276976 137431 348436 151653 3 313 32833536 32935936 37339 16776704 0 267064638 99.600 264179300 20520 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 03:28:31] CVMFS is ok
[2025-10-13 03:28:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:28:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:28:31] Further information can be found at the LHC@home message board.
[2025-10-13 03:28:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:28:31] Checking for apptainer binary...
[2025-10-13 03:28:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:28:31] Running /usr/bin/apptainer --version
[2025-10-13 03:28:32] apptainer version 1.4.3-1.el9
[2025-10-13 03:28:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:28:32] c6-8-25-3.aglt2.org
[2025-10-13 03:28:32] apptainer works
[2025-10-13 03:28:33] Set ATHENA_PROC_NUMBER=9
[2025-10-13 03:28:33] Set ATHENA_CORE_NUMBER=9
[2025-10-13 03:28:33] Starting ATLAS job with PandaID=6841124432
[2025-10-13 03:28:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:36:21]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:36:21] 2025-10-13 10:35:37,451 | INFO     | time since job start (11159s) is within the limit (172800.0s)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,569 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 06:36:21] 2025-10-13 10:35:38,612 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2629.530614583333
[2025-10-13 06:36:21] 2025-10-13 10:35:38,720 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6841124432/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,721 | INFO     | extracted standard info from prmon json
[2025-10-13 06:36:21] 2025-10-13 10:35:38,721 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 06:36:21] 2025-10-13 10:35:38,721 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 06:36:21] 2025-10-13 10:35:38,725 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 06:36:21] 2025-10-13 10:35:38,726 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 06:36:21] 2025-10-13 10:35:38,751 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:36:21] 2025-10-13 10:35:38,752 | INFO     | sum of square deviations: 1808286537.7999911
[2025-10-13 06:36:21] 2025-10-13 10:35:38,753 | INFO     | sum of deviations: -3578103993.499997
[2025-10-13 06:36:21] 2025-10-13 10:35:38,753 | INFO     | mean x: 1760346177.7
[2025-10-13 06:36:21] 2025-10-13 10:35:38,753 | INFO     | mean y: 2147659.4166666665
[2025-10-13 06:36:21] 2025-10-13 10:35:38,753 | INFO     | -- intersect: 3485390805.1816025
[2025-10-13 06:36:21] 2025-10-13 10:35:38,753 | INFO     | intersect: 3485390805.1816025
[2025-10-13 06:36:21] 2025-10-13 10:35:38,754 | INFO     | chi2: 2.8941024910026147
[2025-10-13 06:36:21] 2025-10-13 10:35:38,754 | INFO     | sum of square deviations: 1661745932.594286
[2025-10-13 06:36:21] 2025-10-13 10:35:38,763 | INFO     | sum of deviations: 9154913283.434284
[2025-10-13 06:36:21] 2025-10-13 10:35:38,764 | INFO     | mean x: 1760346025.2057142
[2025-10-13 06:36:21] 2025-10-13 10:35:38,764 | INFO     | mean y: 2160698.765714286
[2025-10-13 06:36:21] 2025-10-13 10:35:38,775 | INFO     | -- intersect: -9695961555.360601
[2025-10-13 06:36:21] 2025-10-13 10:35:38,775 | INFO     | intersect: -9695961555.360601
[2025-10-13 06:36:21] 2025-10-13 10:35:38,776 | INFO     | chi2: 2.201766895779668
[2025-10-13 06:36:21] 2025-10-13 10:35:38,776 | INFO     | current chi2=2.201766895779668 (change=23.922290153003477 %)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,776 | INFO     | right removable region: 174
[2025-10-13 06:36:21] 2025-10-13 10:35:38,777 | INFO     | sum of square deviations: 1661723972.594286
[2025-10-13 06:36:21] 2025-10-13 10:35:38,778 | INFO     | sum of deviations: -34025364959.2343
[2025-10-13 06:36:21] 2025-10-13 10:35:38,778 | INFO     | mean x: 1760346330.2057142
[2025-10-13 06:36:21] 2025-10-13 10:35:38,778 | INFO     | mean y: 2179095.0342857144
[2025-10-13 06:36:21] 2025-10-13 10:35:38,778 | INFO     | -- intersect: 36046929804.376114
[2025-10-13 06:36:21] 2025-10-13 10:35:38,778 | INFO     | intersect: 36046929804.376114
[2025-10-13 06:36:21] 2025-10-13 10:35:38,779 | INFO     | chi2: 1.0383081214752963
[2025-10-13 06:36:21] 2025-10-13 10:35:38,779 | INFO     | current chi2=1.0383081214752963 (change=64.12331198693688 %)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,819 | INFO     | sum of square deviations: 1523301094.876478
[2025-10-13 06:36:21] 2025-10-13 10:35:38,820 | INFO     | sum of deviations: -40319898673.38826
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | mean x: 1760346482.7117648
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | mean y: 2185902.094117647
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | -- intersect: 46596383235.582664
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | intersect: 46596383235.582664
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | chi2: 0.8502957748320323
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | current chi2=0.8502957748320323 (change=18.10756775899274 %)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | left removable region: 20
[2025-10-13 06:36:21] 2025-10-13 10:35:38,821 | INFO     | sum of square deviations: 1132434255.0389667
[2025-10-13 06:36:21] 2025-10-13 10:35:38,822 | INFO     | sum of deviations: -20084783722.025978
[2025-10-13 06:36:21] 2025-10-13 10:35:38,822 | INFO     | mean x: 1760346604.6883116
[2025-10-13 06:36:21] 2025-10-13 10:35:38,822 | INFO     | mean y: 2194147.2077922076
[2025-10-13 06:36:21] 2025-10-13 10:35:38,822 | INFO     | -- intersect: 31223592364.052536
[2025-10-13 06:36:21] 2025-10-13 10:35:38,822 | INFO     | intersect: 31223592364.052536
[2025-10-13 06:36:21] 2025-10-13 10:35:38,823 | INFO     | chi2: 0.1305083324576087
[2025-10-13 06:36:21] 2025-10-13 10:35:38,841 | INFO     | -- intersect: 31223592364.052536
[2025-10-13 06:36:21] 2025-10-13 10:35:38,841 | INFO     | current memory leak: -17.74 B/s (using 154 data points, chi2=0.13)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,842 | INFO     | could have reported an average CPU frequency of 2659 MHz (10 samples)
[2025-10-13 06:36:21] 2025-10-13 10:35:38,842 | INFO     | ..............................
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . Timing measurements:
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . get job = 0 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . initial setup = 5 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . payload setup = 41 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . stage-in = 0 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . payload execution = 10993 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . stage-out = 9 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | . log creation = 1 s
[2025-10-13 06:36:21] 2025-10-13 10:35:38,843 | INFO     | ..............................
[2025-10-13 06:36:21] 2025-10-13 10:35:39,472 | INFO     | time since job start (11161s) is within the limit (172800.0s)
[2025-10-13 06:36:21] 2025-10-13 10:35:39,625 | INFO     | 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | job summary report
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | --------------------------------------------------
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | PanDA job id: 6841124432
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | task id: 46676269
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | errors: (none)
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | pilot state: finished 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | transexitcode: 0
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | exeerrorcode: 0
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | exeerrordiag: 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | exitcode: 0
[2025-10-13 06:36:21] 2025-10-13 10:35:39,626 | INFO     | exitmsg: OK
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | cpuconsumptiontime: 39763 s
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | nevents: 400
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | neventsw: 0
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | pid: 3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | pgrp: 3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | corecount: 9
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | event service: False
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | sizes: {0: 2348630, 1: 2348714, 2: 2348885, 3: 2348913, 14: 2348941, 24: 2348969, 31: 2349387, 35: 2349415, 11039: 2378396, 11050: 2387394, 11051: 2387450, 11093: 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | --------------------------------------------------
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | 
[2025-10-13 06:36:21] 2025-10-13 10:35:39,627 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 06:36:21] 2025-10-13 10:35:39,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,819 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,820 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:36:21] 2025-10-13 10:35:39,820 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,820 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:36:21] 2025-10-13 10:35:39,820 | INFO     | job 6841124432 has completed (purged errors)
[2025-10-13 06:36:21] 2025-10-13 10:35:39,820 | INFO     | overall cleanup function is called
[2025-10-13 06:36:21] 2025-10-13 10:35:40,867 | INFO     | --- collectZombieJob: --- 10, [3994972]
[2025-10-13 06:36:21] 2025-10-13 10:35:40,867 | INFO     | zombie collector waiting for pid 3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:40,867 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:36:21] 2025-10-13 10:35:40,868 | INFO     | collected zombie processes
[2025-10-13 06:36:21] 2025-10-13 10:35:40,868 | INFO     | will attempt to kill all subprocesses of pid=3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:44,788 | INFO     | process IDs to be killed: [3994972] (in reverse order)
[2025-10-13 06:36:21] 2025-10-13 10:35:45,136 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:36:21] 2025-10-13 10:35:45,136 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:36:21] 2025-10-13 10:35:45,275 | INFO     | did not find any defunct processes belonging to 3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:45,374 | INFO     | did not find any defunct processes belonging to 3994972
[2025-10-13 06:36:21] 2025-10-13 10:35:45,374 | INFO     | ready for new job
[2025-10-13 06:36:21] 2025-10-13 10:35:45,375 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:36:21] 2025-10-13 10:35:45,426 | INFO     | ***************************************
[2025-10-13 06:36:21] 2025-10-13 10:35:45,427 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:36:21] 2025-10-13 10:35:45,427 | INFO     | ***************************************
[2025-10-13 06:36:21] 2025-10-13 10:35:45,427 | INFO     | 
[2025-10-13 06:36:21] 2025-10-13 10:35:45,466 | INFO     | architecture information:
[2025-10-13 06:36:21] 2025-10-13 10:35:45,493 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:36:21] 2025-10-13 10:35:45,647 | INFO     | cat /etc/os-release:
[2025-10-13 06:36:21] NAME="CentOS Linux"
[2025-10-13 06:36:21] VERSION="7 (Core)"
[2025-10-13 06:36:21] ID="centos"
[2025-10-13 06:36:21] ID_LIKE="rhel fedora"
[2025-10-13 06:36:21] VERSION_ID="7"
[2025-10-13 06:36:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:36:21] ANSI_COLOR="0;31"
[2025-10-13 06:36:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:36:21] HOME_URL="https://www.centos.org/"
[2025-10-13 06:36:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:36:21] 
[2025-10-13 06:36:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:36:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:36:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:36:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:36:21] 
[2025-10-13 06:36:21] 2025-10-13 10:35:45,648 | INFO     | ***************************************
[2025-10-13 06:36:21] 2025-10-13 10:35:46,151 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 06:36:21] 2025-10-13 10:35:46,247 | INFO     | sufficient remaining disk space (74210869248 B)
[2025-10-13 06:36:21] 2025-10-13 10:35:46,247 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:36:21] 2025-10-13 10:35:46,248 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:36:21] 2025-10-13 10:35:46,248 | INFO     | update_server=False
[2025-10-13 06:36:21] 2025-10-13 10:35:46,248 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:36:21] 2025-10-13 10:35:46,249 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:36:21] 2025-10-13 10:35:46,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:36:21] 2025-10-13 10:35:46,253 | INFO     | aborting loop
[2025-10-13 06:36:21] 2025-10-13 10:35:46,348 | INFO     | all payload control threads have been joined
[2025-10-13 06:36:21] 2025-10-13 10:35:47,034 | INFO     | all data control threads have been joined
[2025-10-13 06:36:21] 2025-10-13 10:35:47,254 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,259 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,341 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,342 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,342 | INFO     | [job] validate thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,353 | INFO     | [payload] control thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,429 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:47,541 | INFO     | all job control threads have been joined
[2025-10-13 06:36:21] 2025-10-13 10:35:47,939 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,040 | INFO     | [data] control thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,256 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,296 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,317 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,497 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,547 | INFO     | [job] control thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:48,672 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:36:21] 2025-10-13 10:35:49,362 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:36:21] 2025-10-13 10:35:49,678 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:53,371 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:36:21] 2025-10-13 10:35:58,322 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:36:21] 2025-10-13 10:35:59,331 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140120089732928)>', '<ExcThread(monitor, started 140119600256768)>']
[2025-10-13 06:36:21] 2025-10-13 10:36:04,373 | INFO     | all workflow threads have been joined
[2025-10-13 06:36:21] 2025-10-13 10:36:04,373 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:36:21] 2025-10-13 10:36:04,374 | INFO     | traces error code: 0
[2025-10-13 06:36:21] 2025-10-13 10:36:04,374 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:36:21] 2025-10-13 10:36:17,761 | INFO     | PID=3983168 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:36:21] 2025-10-13 10:36:17,761 | INFO     | .. there are 40 such processes running
[2025-10-13 06:36:21] 2025-10-13 10:36:17,762 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:36:21] 2025-10-13 10:36:17,762 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:36:21] 2025-10-13 10:36:17,787 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:36:21] 2025-10-13 10:36:17,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:36:21] 2025-10-13 10:36:17,788 | CRITICAL | thread 'MainThread' is not alive
[2025-10-13 06:36:21] 2025-10-13 10:36:17,788 | INFO     | [monitor] control thread has ended
[2025-10-13 06:36:21] 2025-10-13 10:36:19,934 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:36:21] 2025-10-13 10:36:20,048 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:36:21] 2025-10-13 10:36:20,099 [wrapper] pilotpid: 3983168
[2025-10-13 06:36:21] 2025-10-13 10:36:20,133 [wrapper] Pilot exit status: 0
[2025-10-13 06:36:21] 2025-10-13 10:36:20,288 [wrapper] pandaids: 6841124432
[2025-10-13 06:36:21] 2025-10-13 10:36:20,667 [wrapper] cleanup supervisor_pilot  444241 3983169
[2025-10-13 06:36:21] 2025-10-13 10:36:20,686 [wrapper] Test setup, not cleaning
[2025-10-13 06:36:21] 2025-10-13 10:36:20,732 [wrapper] apfmon messages muted
[2025-10-13 06:36:21] 2025-10-13 10:36:20,769 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:36:21] 2025-10-13 10:36:20,796 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:36:21]  *** Error codes and diagnostics ***
[2025-10-13 06:36:21]     "exeErrorCode": 0,
[2025-10-13 06:36:21]     "exeErrorDiag": "",
[2025-10-13 06:36:21]     "pilotErrorCode": 0,
[2025-10-13 06:36:21]     "pilotErrorDiag": "",
[2025-10-13 06:36:21]  *** Listing of results directory ***
[2025-10-13 06:36:21] total 402604
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:49 queuedata.json
[2025-10-13 06:36:21] -rwx------. 1 boincer umatlas     36292 Oct 12 21:49 runpilot2-wrapper.sh
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:36:21] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:28 run_atlas
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:28 job.xml
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas 219765346 Oct 13 03:28 EVNT.46676267._004366.pool.root.1
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:28 start_atlas.sh
[2025-10-13 06:36:21] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:28 shared
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 03:28 input.tar.gz
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:28 boinc_lockfile
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:28 pandaJob.out
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas    972849 Oct 13 03:29 agis_schedconf.cvmfs.json
[2025-10-13 06:36:21] drwx------. 5 boincer umatlas      4096 Oct 13 03:29 pilot3
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 06:31 init_data.xml
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas 185298879 Oct 13 06:33 HITS.46676269._094340.pool.root.1
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas       530 Oct 13 06:33 boinc_task_state.xml
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas      1044 Oct 13 06:34 memory_monitor_summary.json
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas   1560580 Oct 13 06:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas    408192 Oct 13 06:34 log.46676269._094340.job.log.tgz.1
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas        95 Oct 13 06:35 pilot_heartbeat.json
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas      7835 Oct 13 06:35 heartbeat.json
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:36 boinc_mmap_file
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas        28 Oct 13 06:36 wrapper_checkpoint.txt
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas       893 Oct 13 06:36 pilotlog.txt
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas   1246218 Oct 13 06:36 log.46676269._094340.job.log.1
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas       357 Oct 13 06:36 output.list
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:36 runtime_log
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas   1669120 Oct 13 06:36 result.tar.gz
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 06:36 runtime_log.err
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas       656 Oct 13 06:36 9JZLDmsrMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDm1TVMDmx2faKm.diag
[2025-10-13 06:36:21] -rw-r--r--. 1 boincer umatlas     21208 Oct 13 06:36 stderr.txt
[2025-10-13 06:36:21] HITS file was successfully produced:
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas 185298879 Oct 13 06:33 shared/HITS.pool.root.1
[2025-10-13 06:36:21]  *** Contents of shared directory: ***
[2025-10-13 06:36:21] total 397788
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas 219765346 Oct 13 03:28 ATLAS.root_0
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:28 start_atlas.sh
[2025-10-13 06:36:21] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 03:28 input.tar.gz
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas 185298879 Oct 13 06:33 HITS.pool.root.1
[2025-10-13 06:36:21] -rw-------. 1 boincer umatlas   1669120 Oct 13 06:36 result.tar.gz
06:36:22 (3976112): run_atlas exited; CPU time 40328.705174
06:36:22 (3976112): called boinc_finish(0)

</stderr_txt>
]]>

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