Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:41:55 (1118878): wrapper (7.7.26015): starting
02:41:55 (1118878): wrapper: running run_atlas (--nthreads 11)
[2025-10-13 02:41:55] Arguments: --nthreads 11
[2025-10-13 02:41:55] Threads: 11
[2025-10-13 02:41:55] Checking for CVMFS
[2025-10-13 02:41:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:41:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:41:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:41:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:41:56] 2.13.2.0 79137 135996 597008 151652 3 28 28978806 40960000 43840 16776704 0 475930406 99.819 223908542 32253 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:41:56] CVMFS is ok
[2025-10-13 02:41:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:41:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:41:56] Further information can be found at the LHC@home message board.
[2025-10-13 02:41:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:41:56] Checking for apptainer binary...
[2025-10-13 02:41:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:41:56] Running /usr/bin/apptainer --version
[2025-10-13 02:41:56] apptainer version 1.4.3-1.el9
[2025-10-13 02:41:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:41:56] c8-7-6.aglt2.org
[2025-10-13 02:41:56] apptainer works
[2025-10-13 02:41:56] Set ATHENA_PROC_NUMBER=11
[2025-10-13 02:41:56] Set ATHENA_CORE_NUMBER=11
[2025-10-13 02:41:56] Starting ATLAS job with PandaID=6841124351
[2025-10-13 02:41:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:22:52]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:22:52] 2025-10-13 08:21:45,974 | WARNING  | process 1142763 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 04:22:52] 2025-10-13 08:21:45,974 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6841124351/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:22:52] 2025-10-13 08:21:45,975 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4458415 B
[2025-10-13 04:22:52] 2025-10-13 08:21:45,975 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 16508 B
[2025-10-13 04:22:52] 2025-10-13 08:21:45,976 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 04:22:52] 2025-10-13 08:21:47,081 | INFO     | PID=1125584 has CPU usage=13.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 04:22:52] 2025-10-13 08:21:47,081 | INFO     | .. there are 62 such processes running
[2025-10-13 04:22:52] 2025-10-13 08:21:48,082 | INFO     | time since job start (5977s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:21:50,089 | INFO     | time since job start (5979s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:21:52,096 | INFO     | time since job start (5981s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:21:54,109 | INFO     | time since job start (5983s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:21:56,124 | INFO     | time since job start (5985s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:21:58,131 | INFO     | time since job start (5987s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:00,158 | INFO     | time since job start (5989s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:02,165 | INFO     | time since job start (5991s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:04,173 | INFO     | time since job start (5993s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:06,180 | INFO     | time since job start (5995s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:08,202 | INFO     | time since job start (5997s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:10,682 | INFO     | PID=1125584 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:22:52] 2025-10-13 08:22:10,682 | INFO     | .. there are 62 such processes running
[2025-10-13 04:22:52] 2025-10-13 08:22:11,684 | INFO     | time since job start (6000s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:11,684 | INFO     | 6002s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 04:22:52] 2025-10-13 08:22:13,691 | INFO     | time since job start (6002s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:15,698 | INFO     | time since job start (6004s) is within the limit (172800.0s)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,073 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-13 04:22:52] 2025-10-13 08:22:16,091 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3794.127398437499
[2025-10-13 04:22:52] 2025-10-13 08:22:16,130 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6841124351/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,130 | INFO     | extracted standard info from prmon json
[2025-10-13 04:22:52] 2025-10-13 08:22:16,130 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:22:52] 2025-10-13 08:22:16,131 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:22:52] 2025-10-13 08:22:16,179 | INFO     | sufficient remaining disk space (169071345664 B)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,180 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,180 | INFO     | size of work directory /tmp/boinchome/slots/5/PanDA_Pilot-6841124351: 4768529 B (within 2537553920 B limit)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,180 | INFO     | pfn file=/tmp/boinchome/slots/5/PanDA_Pilot-6841124351/HITS.46676269._094259.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,180 | INFO     | total size of present files: 0 B (workdir size: 4768529 B)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,181 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/5/PanDA_Pilot-6841124351/HITS.46676269._094259.pool.root.1 since it does not exist
[2025-10-13 04:22:52] 2025-10-13 08:22:16,183 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:22:52] 2025-10-13 08:22:16,183 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:22:52] 2025-10-13 08:22:16,184 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:22:52] 2025-10-13 08:22:16,184 | INFO     | sum of square deviations: 226012609.65555552
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | sum of deviations: -3150952839.544445
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | mean x: 1760340814.6777778
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | mean y: 2427721.8777777776
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | -- intersect: 24544203939.71007
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | intersect: 24544203939.71007
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | chi2: 0.013031331457062714
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | -- intersect: 24544203939.71007
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | current memory leak: -13.94 B/s (using 90 data points, chi2=0.01)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | could have reported an average CPU frequency of 3795 MHz (7 samples)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | ..............................
[2025-10-13 04:22:52] 2025-10-13 08:22:16,185 | INFO     | . Timing measurements:
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . get job = 0 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . initial setup = 2 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . payload setup = 20 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . stage-in = 0 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . payload execution = 5916 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . stage-out = 1 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | . log creation = 0 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,186 | INFO     | ..............................
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | 
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | job summary report
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | --------------------------------------------------
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | PanDA job id: 6841124351
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | task id: 46676269
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | errors: (none)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | pilot state: finished 
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | transexitcode: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:16,432 | INFO     | exeerrorcode: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | exeerrordiag: 
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | exitcode: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | exitmsg: OK
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | cpuconsumptiontime: 23616 s
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | nevents: 400
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | neventsw: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | pid: 1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | pgrp: 1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | corecount: 11
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | event service: False
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | sizes: {0: 2348857, 7: 2349119, 11: 2349147, 5940: 2375767, 5941: 2375766, 5943: 2384820, 5946: 2385004, 5978: 2385226}
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | --------------------------------------------------
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | 
[2025-10-13 04:22:52] 2025-10-13 08:22:16,433 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,512 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | job 6841124351 has completed (purged errors)
[2025-10-13 04:22:52] 2025-10-13 08:22:16,513 | INFO     | overall cleanup function is called
[2025-10-13 04:22:52] 2025-10-13 08:22:17,518 | INFO     | number of running child processes to parent process 1142763: 1
[2025-10-13 04:22:52] 2025-10-13 08:22:17,518 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:22:52] 2025-10-13 08:22:17,519 | INFO     | aborting job monitoring since job object (job id=6841124351) has expired
[2025-10-13 04:22:52] 2025-10-13 08:22:17,532 | INFO     | --- collectZombieJob: --- 10, [1142763]
[2025-10-13 04:22:52] 2025-10-13 08:22:17,533 | INFO     | zombie collector waiting for pid 1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:17,533 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:22:52] 2025-10-13 08:22:17,533 | INFO     | collected zombie processes
[2025-10-13 04:22:52] 2025-10-13 08:22:17,533 | INFO     | will attempt to kill all subprocesses of pid=1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:18,926 | INFO     | process IDs to be killed: [1142763] (in reverse order)
[2025-10-13 04:22:52] 2025-10-13 08:22:19,272 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:22:52] 2025-10-13 08:22:19,275 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:22:52] 2025-10-13 08:22:19,311 | INFO     | did not find any defunct processes belonging to 1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:19,341 | INFO     | did not find any defunct processes belonging to 1142763
[2025-10-13 04:22:52] 2025-10-13 08:22:19,341 | INFO     | ready for new job
[2025-10-13 04:22:52] 2025-10-13 08:22:19,341 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:22:52] 2025-10-13 08:22:19,342 | INFO     | ***************************************
[2025-10-13 04:22:52] 2025-10-13 08:22:19,342 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:22:52] 2025-10-13 08:22:19,342 | INFO     | ***************************************
[2025-10-13 04:22:52] 2025-10-13 08:22:19,342 | INFO     | 
[2025-10-13 04:22:52] 2025-10-13 08:22:19,347 | INFO     | architecture information:
[2025-10-13 04:22:52] 2025-10-13 08:22:19,349 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:22:52] 2025-10-13 08:22:19,387 | INFO     | cat /etc/os-release:
[2025-10-13 04:22:52] NAME="CentOS Linux"
[2025-10-13 04:22:52] VERSION="7 (Core)"
[2025-10-13 04:22:52] ID="centos"
[2025-10-13 04:22:52] ID_LIKE="rhel fedora"
[2025-10-13 04:22:52] VERSION_ID="7"
[2025-10-13 04:22:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:22:52] ANSI_COLOR="0;31"
[2025-10-13 04:22:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:22:52] HOME_URL="https://www.centos.org/"
[2025-10-13 04:22:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:22:52] 
[2025-10-13 04:22:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:22:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:22:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:22:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:22:52] 
[2025-10-13 04:22:52] 2025-10-13 08:22:19,388 | INFO     | ***************************************
[2025-10-13 04:22:52] 2025-10-13 08:22:19,905 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-13 04:22:52] 2025-10-13 08:22:20,019 | INFO     | sufficient remaining disk space (169273720832 B)
[2025-10-13 04:22:52] 2025-10-13 08:22:20,019 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:22:52] 2025-10-13 08:22:20,020 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:22:52] 2025-10-13 08:22:20,020 | INFO     | update_server=False
[2025-10-13 04:22:52] 2025-10-13 08:22:20,020 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:22:52] 2025-10-13 08:22:20,048 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 04:22:52] 2025-10-13 08:22:20,048 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 04:22:52] 2025-10-13 08:22:20,048 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:22:52] 2025-10-13 08:22:20,048 | INFO     | will abort loop
[2025-10-13 04:22:52] 2025-10-13 08:22:20,059 | INFO     | all job control threads have been joined
[2025-10-13 04:22:52] 2025-10-13 08:22:20,219 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:22:52] 2025-10-13 08:22:20,911 | INFO     | all payload control threads have been joined
[2025-10-13 04:22:52] 2025-10-13 08:22:21,025 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,054 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,064 | INFO     | [job] control thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,113 | INFO     | all data control threads have been joined
[2025-10-13 04:22:52] 2025-10-13 08:22:21,429 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:22:52] 2025-10-13 08:22:21,436 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,513 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,733 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:22:52] 2025-10-13 08:22:21,830 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:21,929 | INFO     | [payload] control thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,119 | INFO     | [data] control thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:22:52] 2025-10-13 08:22:22,250 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,296 | INFO     | [job] validate thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,296 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,365 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,435 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:22,474 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:26,231 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:30,929 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:22:52] 2025-10-13 08:22:31,935 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:22:52] 2025-10-13 08:22:33,178 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140218951604032)>', '<ExcThread(monitor, started 140217780524800)>']
[2025-10-13 04:22:52] 2025-10-13 08:22:38,204 | INFO     | all workflow threads have been joined
[2025-10-13 04:22:52] 2025-10-13 08:22:38,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:22:52] 2025-10-13 08:22:38,204 | INFO     | traces error code: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:38,204 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:22:52] 2025-10-13 08:22:49,796 | INFO     | PID=1125584 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:22:52] 2025-10-13 08:22:49,797 | INFO     | .. there are 62 such processes running
[2025-10-13 04:22:52] 2025-10-13 08:22:49,798 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:22:52] 2025-10-13 08:22:49,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:22:52] 2025-10-13 08:22:49,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:22:52] 2025-10-13 08:22:49,798 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:22:52] 2025-10-13 08:22:49,798 | INFO     | [monitor] control thread has ended
[2025-10-13 04:22:52] 2025-10-13 08:22:50,386 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:22:52] 2025-10-13 08:22:50,407 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:22:52] 2025-10-13 08:22:50,427 [wrapper] pilotpid: 1125584
[2025-10-13 04:22:52] 2025-10-13 08:22:50,446 [wrapper] Pilot exit status: 0
[2025-10-13 04:22:52] 2025-10-13 08:22:50,538 [wrapper] pandaids: 6841124351
[2025-10-13 04:22:52] 2025-10-13 08:22:51,608 [wrapper] cleanup supervisor_pilot 1838146 1125585
[2025-10-13 04:22:52] 2025-10-13 08:22:51,639 [wrapper] Test setup, not cleaning
[2025-10-13 04:22:52] 2025-10-13 08:22:51,674 [wrapper] apfmon messages muted
[2025-10-13 04:22:52] 2025-10-13 08:22:51,700 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:22:52] 2025-10-13 08:22:51,831 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:22:52]  *** Error codes and diagnostics ***
[2025-10-13 04:22:52]     "exeErrorCode": 0,
[2025-10-13 04:22:52]     "exeErrorDiag": "",
[2025-10-13 04:22:52]     "pilotErrorCode": 0,
[2025-10-13 04:22:52]     "pilotErrorDiag": "",
[2025-10-13 04:22:52]  *** Listing of results directory ***
[2025-10-13 04:22:52] total 411852
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 04:22:52] -rwx------. 1 boincer umatlas     36292 Oct 12 21:38 runpilot2-wrapper.sh
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:38 queuedata.json
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:22:52] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:41 run_atlas
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:41 job.xml
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas 221634882 Oct 13 02:41 EVNT.46676267._004362.pool.root.1
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:41 start_atlas.sh
[2025-10-13 04:22:52] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:41 shared
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 02:41 input.tar.gz
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:41 boinc_lockfile
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 02:41 pandaJob.out
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas    972849 Oct 13 02:42 agis_schedconf.cvmfs.json
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:42 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:22:52] drwx------. 5 boincer umatlas      4096 Oct 13 02:42 pilot3
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas      7161 Oct 13 04:18 init_data.xml
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas 193876201 Oct 13 04:20 HITS.46676269._094259.pool.root.1
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas       530 Oct 13 04:20 boinc_task_state.xml
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas      1045 Oct 13 04:21 memory_monitor_summary.json
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas    398511 Oct 13 04:21 log.46676269._094259.job.log.tgz.1
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas      7800 Oct 13 04:22 heartbeat.json
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:22 boinc_mmap_file
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:22 wrapper_checkpoint.txt
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas       823 Oct 13 04:22 pilotlog.txt
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas        95 Oct 13 04:22 pilot_heartbeat.json
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas    763971 Oct 13 04:22 log.46676269._094259.job.log.1
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas       357 Oct 13 04:22 output.list
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:22 runtime_log
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas   1177600 Oct 13 04:22 result.tar.gz
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas      8695 Oct 13 04:22 runtime_log.err
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas       655 Oct 13 04:22 MRtLDmghMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPOmNDmw2uRDn.diag
[2025-10-13 04:22:52] -rw-r--r--. 1 boincer umatlas     22525 Oct 13 04:22 stderr.txt
[2025-10-13 04:22:52] HITS file was successfully produced:
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas 193876201 Oct 13 04:20 shared/HITS.pool.root.1
[2025-10-13 04:22:52]  *** Contents of shared directory: ***
[2025-10-13 04:22:52] total 407516
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas 221634882 Oct 13 02:41 ATLAS.root_0
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:41 start_atlas.sh
[2025-10-13 04:22:52] -rw-r--r--. 2 boincer umatlas    569680 Oct 13 02:41 input.tar.gz
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas 193876201 Oct 13 04:20 HITS.pool.root.1
[2025-10-13 04:22:52] -rw-------. 1 boincer umatlas   1177600 Oct 13 04:22 result.tar.gz
04:22:54 (1118878): run_atlas exited; CPU time 23806.047991
04:22:54 (1118878): called boinc_finish(0)

</stderr_txt>
]]>

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