Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:34:37 (29469): wrapper (7.7.26015): starting
02:34:37 (29469): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:34:37] Arguments: --nthreads 8
[2025-10-13 02:34:37] Threads: 8
[2025-10-13 02:34:37] Checking for CVMFS
[2025-10-13 02:34:38] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:34:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:34:38] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:34:38] 2.11.2.0 2932 202494 119220 151650 1 59 14182082 20275200 1 130560 1 73483033 99.973 10291454 13776 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:34:38] CVMFS is ok
[2025-10-13 02:34:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:34:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:34:38] Further information can be found at the LHC@home message board.
[2025-10-13 02:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:34:38] Checking for apptainer binary...
[2025-10-13 02:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:34:38] Running /usr/bin/apptainer --version
[2025-10-13 02:34:38] apptainer version 1.3.2-1.el7
[2025-10-13 02:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:34:40] c-204-17.aglt2.org
[2025-10-13 02:34:40] apptainer works
[2025-10-13 02:34:40] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:34:40] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:34:40] Starting ATLAS job with PandaID=6840531998
[2025-10-13 02:34:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:43:17]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:43:17] 2025-10-13 08:42:23,306 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:43:17] 2025-10-13 08:42:23,306 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:43:17] 2025-10-13 08:42:23,306 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:43:17] 2025-10-13 08:42:23,309 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:43:17] 2025-10-13 08:42:23,310 | INFO     | sum of square deviations: 605592750.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,310 | INFO     | sum of deviations: 21261871592.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,310 | INFO     | mean x: 1760341111.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,310 | INFO     | mean y: 2464619.008
[2025-10-13 04:43:17] 2025-10-13 08:42:23,311 | INFO     | -- intersect: -61801687858.379845
[2025-10-13 04:43:17] 2025-10-13 08:42:23,311 | INFO     | intersect: -61801687858.379845
[2025-10-13 04:43:17] 2025-10-13 08:42:23,311 | INFO     | chi2: 1.4745282536844413
[2025-10-13 04:43:17] 2025-10-13 08:42:23,311 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,312 | INFO     | sum of deviations: 20371715976.999996
[2025-10-13 04:43:17] 2025-10-13 08:42:23,312 | INFO     | mean x: 1760340958.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,312 | INFO     | mean y: 2462673.35
[2025-10-13 04:43:17] 2025-10-13 08:42:23,312 | INFO     | -- intersect: -66929321944.26243
[2025-10-13 04:43:17] 2025-10-13 08:42:23,312 | INFO     | intersect: -66929321944.26243
[2025-10-13 04:43:17] 2025-10-13 08:42:23,313 | INFO     | chi2: 1.4753787392340678
[2025-10-13 04:43:17] 2025-10-13 08:42:23,313 | INFO     | current chi2=1.4753787392340678 (change=-0.05767848445775068 %)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,313 | INFO     | right removable region: 119
[2025-10-13 04:43:17] 2025-10-13 08:42:23,313 | INFO     | sum of square deviations: 535786790.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,314 | INFO     | sum of deviations: 1146348447.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,314 | INFO     | mean x: 1760341263.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,314 | INFO     | mean y: 2507915.5083333333
[2025-10-13 04:43:17] 2025-10-13 08:42:23,314 | INFO     | -- intersect: -3763849359.7119336
[2025-10-13 04:43:17] 2025-10-13 08:42:23,314 | INFO     | intersect: -3763849359.7119336
[2025-10-13 04:43:17] 2025-10-13 08:42:23,315 | INFO     | chi2: 0.03486016740030159
[2025-10-13 04:43:17] 2025-10-13 08:42:23,315 | INFO     | current chi2=0.03486016740030159 (change=97.63584269659157 %)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,315 | INFO     | sum of square deviations: 471562330.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,315 | INFO     | sum of deviations: -1396635443.0000002
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | mean x: 1760341416.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | mean y: 2513826.9826086955
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | -- intersect: 5216151679.196986
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | intersect: 5216151679.196986
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | chi2: 0.003135029836929836
[2025-10-13 04:43:17] 2025-10-13 08:42:23,316 | INFO     | current chi2=0.003135029836929836 (change=91.00684227665896 %)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,317 | INFO     | sum of square deviations: 412686807.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,317 | INFO     | sum of deviations: -1517046179.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,317 | INFO     | mean x: 1760341568.5
[2025-10-13 04:43:17] 2025-10-13 08:42:23,317 | INFO     | mean y: 2514130.4454545453
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | -- intersect: 6473570153.015216
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | intersect: 6473570153.015216
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | chi2: 0.0028185915164901476
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | current chi2=0.0028185915164901476 (change=10.093630265081602 %)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | left removable region: 30
[2025-10-13 04:43:17] 2025-10-13 08:42:23,318 | INFO     | sum of square deviations: 218571540.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,319 | INFO     | sum of deviations: -504509650.00000006
[2025-10-13 04:43:17] 2025-10-13 08:42:23,319 | INFO     | mean x: 1760341843.0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,319 | INFO     | mean y: 2510801.0674157306
[2025-10-13 04:43:17] 2025-10-13 08:42:23,319 | INFO     | -- intersect: 4065754565.9797416
[2025-10-13 04:43:17] 2025-10-13 08:42:23,319 | INFO     | intersect: 4065754565.9797416
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | chi2: 0.0021408582202328556
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | -- intersect: 4065754565.9797416
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | current memory leak: -2.31 B/s (using 89 data points, chi2=0.00)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | could have reported an average CPU frequency of 1989 MHz (8 samples)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | ..............................
[2025-10-13 04:43:17] 2025-10-13 08:42:23,320 | INFO     | . Timing measurements:
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . get job = 0 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . initial setup = 2 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . payload setup = 8 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . stage-in = 0 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . payload execution = 7609 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . stage-out = 0 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | . log creation = 0 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,321 | INFO     | ..............................
[2025-10-13 04:43:17] 2025-10-13 08:42:23,589 | INFO     | 
[2025-10-13 04:43:17] 2025-10-13 08:42:23,589 | INFO     | job summary report
[2025-10-13 04:43:17] 2025-10-13 08:42:23,589 | INFO     | --------------------------------------------------
[2025-10-13 04:43:17] 2025-10-13 08:42:23,589 | INFO     | PanDA job id: 6840531998
[2025-10-13 04:43:17] 2025-10-13 08:42:23,589 | INFO     | task id: 46676269
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | errors: (none)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | pilot state: finished 
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | transexitcode: 0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | exeerrorcode: 0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,590 | INFO     | exeerrordiag: 
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | exitcode: 0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | exitmsg: OK
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | cpuconsumptiontime: 56465 s
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | nevents: 400
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | neventsw: 0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,591 | INFO     | pid: 9229
[2025-10-13 04:43:17] 2025-10-13 08:42:23,592 | INFO     | pgrp: 9229
[2025-10-13 04:43:17] 2025-10-13 08:42:23,592 | INFO     | corecount: 8
[2025-10-13 04:43:17] 2025-10-13 08:42:23,592 | INFO     | event service: False
[2025-10-13 04:43:17] 2025-10-13 08:42:23,592 | INFO     | sizes: {0: 2348686, 1: 2348885, 6: 2349147, 11: 2349175, 7621: 2376724, 7622: 2385906, 7628: 2386044}
[2025-10-13 04:43:17] 2025-10-13 08:42:23,592 | INFO     | --------------------------------------------------
[2025-10-13 04:43:17] 2025-10-13 08:42:23,593 | INFO     | 
[2025-10-13 04:43:17] 2025-10-13 08:42:23,593 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:43:17] 2025-10-13 08:42:23,623 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,623 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,624 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,624 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,624 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,624 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,624 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,625 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,625 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,625 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,625 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,625 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,626 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,627 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,627 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:43:17] 2025-10-13 08:42:23,627 | INFO     | job 6840531998 has completed (purged errors)
[2025-10-13 04:43:17] 2025-10-13 08:42:23,627 | INFO     | overall cleanup function is called
[2025-10-13 04:43:17] 2025-10-13 08:42:24,635 | INFO     | --- collectZombieJob: --- 10, [9229]
[2025-10-13 04:43:17] 2025-10-13 08:42:24,635 | INFO     | zombie collector waiting for pid 9229
[2025-10-13 04:43:17] 2025-10-13 08:42:24,635 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:43:17] 2025-10-13 08:42:24,636 | INFO     | collected zombie processes
[2025-10-13 04:43:17] 2025-10-13 08:42:24,636 | INFO     | will attempt to kill all subprocesses of pid=9229
[2025-10-13 04:43:17] 2025-10-13 08:42:24,722 | INFO     | process IDs to be killed: [9229] (in reverse order)
[2025-10-13 04:43:17] 2025-10-13 08:42:24,783 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:43:17] 2025-10-13 08:42:24,783 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:43:17] 2025-10-13 08:42:24,788 | INFO     | did not find any defunct processes belonging to 9229
[2025-10-13 04:43:17] 2025-10-13 08:42:24,790 | INFO     | did not find any defunct processes belonging to 9229
[2025-10-13 04:43:17] 2025-10-13 08:42:24,791 | INFO     | ready for new job
[2025-10-13 04:43:17] 2025-10-13 08:42:24,791 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:43:17] 2025-10-13 08:42:24,792 | INFO     | ***************************************
[2025-10-13 04:43:17] 2025-10-13 08:42:24,793 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:43:17] 2025-10-13 08:42:24,793 | INFO     | ***************************************
[2025-10-13 04:43:17] 2025-10-13 08:42:24,793 | INFO     | 
[2025-10-13 04:43:17] 2025-10-13 08:42:24,793 | INFO     | architecture information:
[2025-10-13 04:43:17] 2025-10-13 08:42:24,794 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:43:17] 2025-10-13 08:42:24,812 | INFO     | cat /etc/os-release:
[2025-10-13 04:43:17] NAME="CentOS Linux"
[2025-10-13 04:43:17] VERSION="7 (Core)"
[2025-10-13 04:43:17] ID="centos"
[2025-10-13 04:43:17] ID_LIKE="rhel fedora"
[2025-10-13 04:43:17] VERSION_ID="7"
[2025-10-13 04:43:17] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:43:17] ANSI_COLOR="0;31"
[2025-10-13 04:43:17] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:43:17] HOME_URL="https://www.centos.org/"
[2025-10-13 04:43:17] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:43:17] 
[2025-10-13 04:43:17] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:43:17] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:43:17] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:43:17] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:43:17] 
[2025-10-13 04:43:17] 2025-10-13 08:42:24,812 | INFO     | ***************************************
[2025-10-13 04:43:17] 2025-10-13 08:42:25,315 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:43:17] 2025-10-13 08:42:25,337 | INFO     | sufficient remaining disk space (18556649472 B)
[2025-10-13 04:43:17] 2025-10-13 08:42:25,337 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:43:17] 2025-10-13 08:42:25,337 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:43:17] 2025-10-13 08:42:25,338 | INFO     | update_server=False
[2025-10-13 04:43:17] 2025-10-13 08:42:25,338 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:43:17] 2025-10-13 08:42:25,338 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:43:17] 2025-10-13 08:42:25,339 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:43:17] 2025-10-13 08:42:25,339 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:43:17] 2025-10-13 08:42:25,339 | INFO     | aborting loop
[2025-10-13 04:43:17] 2025-10-13 08:42:25,825 | INFO     | all payload control threads have been joined
[2025-10-13 04:43:17] 2025-10-13 08:42:26,056 | INFO     | all data control threads have been joined
[2025-10-13 04:43:17] 2025-10-13 08:42:26,341 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,343 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,345 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,433 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,599 | INFO     | all job control threads have been joined
[2025-10-13 04:43:17] 2025-10-13 08:42:26,600 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,648 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,670 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:26,831 | INFO     | [payload] control thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,062 | INFO     | [data] control thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,089 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,220 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:43:17] 2025-10-13 08:42:27,344 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,605 | INFO     | [job] control thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,706 | INFO     | [job] validate thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:27,832 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:31,226 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:35,879 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:43:17] 2025-10-13 08:42:36,885 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:43:17] 2025-10-13 08:42:56,380 | INFO     | PID=702 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 04:43:17] 2025-10-13 08:42:56,381 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:43:17] 2025-10-13 08:42:56,381 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:43:17] 2025-10-13 08:42:56,381 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:43:17] 2025-10-13 08:43:09,778 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:43:17] 2025-10-13 08:43:11,885 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024246232896)>', '<ExcThread(monitor, started 140023944947456)>']
[2025-10-13 04:43:17] 2025-10-13 08:43:12,450 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:43:17] 2025-10-13 08:43:12,450 | INFO     | [monitor] control thread has ended
[2025-10-13 04:43:17] 2025-10-13 08:43:16,911 | INFO     | all workflow threads have been joined
[2025-10-13 04:43:17] 2025-10-13 08:43:16,911 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:43:17] 2025-10-13 08:43:16,911 | INFO     | traces error code: 0
[2025-10-13 04:43:17] 2025-10-13 08:43:16,912 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:43:17] 2025-10-13 08:43:17,032 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:43:17] 2025-10-13 08:43:17,037 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:43:17] 2025-10-13 08:43:17,041 [wrapper] pilotpid: 702
[2025-10-13 04:43:17] 2025-10-13 08:43:17,046 [wrapper] Pilot exit status: 0
[2025-10-13 04:43:17] 2025-10-13 08:43:17,065 [wrapper] pandaids: 6840531998
[2025-10-13 04:43:17] 2025-10-13 08:43:17,115 [wrapper] cleanup supervisor_pilot  5701 703
[2025-10-13 04:43:17] 2025-10-13 08:43:17,119 [wrapper] Test setup, not cleaning
[2025-10-13 04:43:17] 2025-10-13 08:43:17,124 [wrapper] apfmon messages muted
[2025-10-13 04:43:17] 2025-10-13 08:43:17,129 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:43:17] 2025-10-13 08:43:17,133 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:43:17]  *** Error codes and diagnostics ***
[2025-10-13 04:43:17]     "exeErrorCode": 0,
[2025-10-13 04:43:17]     "exeErrorDiag": "",
[2025-10-13 04:43:17]     "pilotErrorCode": 0,
[2025-10-13 04:43:17]     "pilotErrorDiag": "",
[2025-10-13 04:43:17]  *** Listing of results directory ***
[2025-10-13 04:43:17] total 404968
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:20 pilot3.tar.gz
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 14:22 queuedata.json
[2025-10-13 04:43:17] -rwx------ 1 boincer umatlas     36292 Oct 12 14:22 runpilot2-wrapper.sh
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:43:17] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:34 run_atlas
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:34 job.xml
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas 219647339 Oct 13 02:34 EVNT.46676267._004400.pool.root.1
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:34 start_atlas.sh
[2025-10-13 04:43:17] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:34 shared
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 02:34 input.tar.gz
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:34 boinc_lockfile
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:34 pandaJob.out
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas    973230 Oct 13 02:34 agis_schedconf.cvmfs.json
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas   1560580 Oct 13 02:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:43:17] drwx------ 5 boincer umatlas      4096 Oct 13 02:34 pilot3
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas      5910 Oct 13 04:36 init_data.xml
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas 188234546 Oct 13 04:41 HITS.46676269._086019.pool.root.1
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas       529 Oct 13 04:41 boinc_task_state.xml
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas      1050 Oct 13 04:42 memory_monitor_summary.json
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas    381991 Oct 13 04:42 log.46676269._086019.job.log.tgz.1
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas      7852 Oct 13 04:42 heartbeat.json
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas        95 Oct 13 04:42 pilot_heartbeat.json
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:42 boinc_mmap_file
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas        27 Oct 13 04:42 wrapper_checkpoint.txt
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas      4816 Oct 13 04:43 pilotlog.txt
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas   1072258 Oct 13 04:43 log.46676269._086019.job.log.1
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas       357 Oct 13 04:43 output.list
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:43 runtime_log
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas   1474560 Oct 13 04:43 result.tar.gz
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas      8703 Oct 13 04:43 runtime_log.err
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas       660 Oct 13 04:43 JHELDmStFS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmG2kNDmZWu17m.diag
[2025-10-13 04:43:17] -rw-r--r-- 1 boincer umatlas     20834 Oct 13 04:43 stderr.txt
[2025-10-13 04:43:17] HITS file was successfully produced:
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas 188234546 Oct 13 04:41 shared/HITS.pool.root.1
[2025-10-13 04:43:17]  *** Contents of shared directory: ***
[2025-10-13 04:43:17] total 400344
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas 219647339 Oct 13 02:34 ATLAS.root_0
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:34 start_atlas.sh
[2025-10-13 04:43:17] -rw-r--r-- 2 boincer umatlas    569678 Oct 13 02:34 input.tar.gz
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas 188234546 Oct 13 04:41 HITS.pool.root.1
[2025-10-13 04:43:17] -rw------- 1 boincer umatlas   1474560 Oct 13 04:43 result.tar.gz
04:43:18 (29469): run_atlas exited; CPU time 56410.438992
04:43:18 (29469): called boinc_finish(0)

</stderr_txt>
]]>

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