Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:35:35 (17664): wrapper (7.7.26015): starting
02:35:35 (17664): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:35:35] Arguments: --nthreads 8
[2025-10-13 02:35:35] Threads: 8
[2025-10-13 02:35:35] Checking for CVMFS
[2025-10-13 02:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:35:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:35:36] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:35:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:35:36] 2.11.2.0 12540 53954 125836 151650 0 188 16061472 18432000 1833 130560 0 49712906 99.976 2417942 38126 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:35:36] CVMFS is ok
[2025-10-13 02:35:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:35:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:35:36] Further information can be found at the LHC@home message board.
[2025-10-13 02:35:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:35:36] Checking for apptainer binary...
[2025-10-13 02:35:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:35:36] Running /usr/bin/apptainer --version
[2025-10-13 02:35:36] apptainer version 1.3.2-1.el7
[2025-10-13 02:35:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:35:36] c-206-17.aglt2.org
[2025-10-13 02:35:36] apptainer works
[2025-10-13 02:35:36] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:35:36] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:35:36] Starting ATLAS job with PandaID=6841069481
[2025-10-13 02:35:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:37:09]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:37:09] 2025-10-13 09:36:05,902 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 05:37:09] 2025-10-13 09:36:05,902 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:37:09] 2025-10-13 09:36:05,902 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:37:09] 2025-10-13 09:36:05,905 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:37:09] 2025-10-13 09:36:05,905 | INFO     | sum of square deviations: 1719429448.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,906 | INFO     | sum of deviations: 32779751596.999996
[2025-10-13 05:37:09] 2025-10-13 09:36:05,906 | INFO     | mean x: 1760342740.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,906 | INFO     | mean y: 2460218.418079096
[2025-10-13 05:37:09] 2025-10-13 09:36:05,906 | INFO     | -- intersect: -33557275431.045074
[2025-10-13 05:37:09] 2025-10-13 09:36:05,907 | INFO     | intersect: -33557275431.045074
[2025-10-13 05:37:09] 2025-10-13 09:36:05,907 | INFO     | chi2: 1.3703290806689903
[2025-10-13 05:37:09] 2025-10-13 09:36:05,907 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,908 | INFO     | sum of deviations: 31766448297.499996
[2025-10-13 05:37:09] 2025-10-13 09:36:05,908 | INFO     | mean x: 1760342587.5
[2025-10-13 05:37:09] 2025-10-13 09:36:05,908 | INFO     | mean y: 2459127.145348837
[2025-10-13 05:37:09] 2025-10-13 09:36:05,908 | INFO     | -- intersect: -35439422600.442474
[2025-10-13 05:37:09] 2025-10-13 09:36:05,908 | INFO     | intersect: -35439422600.442474
[2025-10-13 05:37:09] 2025-10-13 09:36:05,909 | INFO     | chi2: 1.3705383887234819
[2025-10-13 05:37:09] 2025-10-13 09:36:05,909 | INFO     | current chi2=1.3705383887234819 (change=-0.015274291222763334 %)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,909 | INFO     | right removable region: 171
[2025-10-13 05:37:09] 2025-10-13 09:36:05,909 | INFO     | sum of square deviations: 1577789583.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,910 | INFO     | sum of deviations: 6664823064.5
[2025-10-13 05:37:09] 2025-10-13 09:36:05,910 | INFO     | mean x: 1760342892.5
[2025-10-13 05:37:09] 2025-10-13 09:36:05,910 | INFO     | mean y: 2487988.215116279
[2025-10-13 05:37:09] 2025-10-13 09:36:05,910 | INFO     | -- intersect: -7433468008.562841
[2025-10-13 05:37:09] 2025-10-13 09:36:05,910 | INFO     | intersect: -7433468008.562841
[2025-10-13 05:37:09] 2025-10-13 09:36:05,911 | INFO     | chi2: 0.023541079525959126
[2025-10-13 05:37:09] 2025-10-13 09:36:05,911 | INFO     | current chi2=0.023541079525959126 (change=98.28208567868482 %)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,911 | INFO     | sum of square deviations: 1444149868.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | sum of deviations: 3682579272.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | mean x: 1760343045.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | mean y: 2491340.6586826346
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | -- intersect: -4486379899.626168
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | intersect: -4486379899.626168
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | chi2: 0.0011047570255045833
[2025-10-13 05:37:09] 2025-10-13 09:36:05,912 | INFO     | current chi2=0.0011047570255045833 (change=95.30710975133341 %)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,913 | INFO     | sum of square deviations: 1318277740.5
[2025-10-13 05:37:09] 2025-10-13 09:36:05,913 | INFO     | sum of deviations: 3381824810.9999995
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | mean x: 1760343197.5
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | mean y: 2491703.098765432
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | -- intersect: -4513379359.794731
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | intersect: -4513379359.794731
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | chi2: 0.0009840983068823837
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | current chi2=0.0009840983068823837 (change=10.921742594675084 %)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,914 | INFO     | left removable region: 30
[2025-10-13 05:37:09] 2025-10-13 09:36:05,915 | INFO     | sum of square deviations: 869188390.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,915 | INFO     | sum of deviations: 2453205402.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,915 | INFO     | mean x: 1760343472.0
[2025-10-13 05:37:09] 2025-10-13 09:36:05,915 | INFO     | mean y: 2492549.7517730496
[2025-10-13 05:37:09] 2025-10-13 09:36:05,915 | INFO     | -- intersect: -4965917250.206365
[2025-10-13 05:37:09] 2025-10-13 09:36:05,916 | INFO     | intersect: -4965917250.206365
[2025-10-13 05:37:09] 2025-10-13 09:36:05,916 | INFO     | chi2: 0.0008353734115143368
[2025-10-13 05:37:09] 2025-10-13 09:36:05,916 | INFO     | -- intersect: -4965917250.206365
[2025-10-13 05:37:09] 2025-10-13 09:36:05,916 | INFO     | current memory leak: 2.82 B/s (using 141 data points, chi2=0.00)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,916 | INFO     | could have reported an average CPU frequency of 2572 MHz (9 samples)
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | ..............................
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . Timing measurements:
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . get job = 0 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . initial setup = 2 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . payload setup = 4 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . stage-in = 0 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . payload execution = 10786 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . stage-out = 2 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | . log creation = 0 s
[2025-10-13 05:37:09] 2025-10-13 09:36:05,917 | INFO     | ..............................
[2025-10-13 05:37:09] 2025-10-13 09:36:06,039 | INFO     | 
[2025-10-13 05:37:09] 2025-10-13 09:36:06,039 | INFO     | job summary report
[2025-10-13 05:37:09] 2025-10-13 09:36:06,039 | INFO     | --------------------------------------------------
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | PanDA job id: 6841069481
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | task id: 46676269
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | errors: (none)
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | pilot state: finished 
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | transexitcode: 0
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | exeerrorcode: 0
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | exeerrordiag: 
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | exitcode: 0
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | exitmsg: OK
[2025-10-13 05:37:09] 2025-10-13 09:36:06,040 | INFO     | cpuconsumptiontime: 81666 s
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | nevents: 400
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | neventsw: 0
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | pid: 27916
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | pgrp: 27916
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | corecount: 8
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | event service: False
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | sizes: {0: 2348857, 1: 2348857, 4: 2349147, 12: 2349175, 10794: 2378250, 10795: 2378249, 10798: 2387431, 10800: 2387487, 10803: 2387745}
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | --------------------------------------------------
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | 
[2025-10-13 05:37:09] 2025-10-13 09:36:06,041 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 05:37:09] 2025-10-13 09:36:06,066 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,066 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,067 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,068 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,068 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,068 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,068 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,068 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:37:09] 2025-10-13 09:36:06,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:37:09] 2025-10-13 09:36:06,070 | INFO     | job 6841069481 has completed (purged errors)
[2025-10-13 05:37:09] 2025-10-13 09:36:06,070 | INFO     | overall cleanup function is called
[2025-10-13 05:37:09] 2025-10-13 09:36:07,078 | INFO     | --- collectZombieJob: --- 10, [27916]
[2025-10-13 05:37:09] 2025-10-13 09:36:07,079 | INFO     | zombie collector waiting for pid 27916
[2025-10-13 05:37:09] 2025-10-13 09:36:07,079 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:37:09] 2025-10-13 09:36:07,079 | INFO     | collected zombie processes
[2025-10-13 05:37:09] 2025-10-13 09:36:07,079 | INFO     | will attempt to kill all subprocesses of pid=27916
[2025-10-13 05:37:09] 2025-10-13 09:36:07,218 | INFO     | process IDs to be killed: [27916] (in reverse order)
[2025-10-13 05:37:09] 2025-10-13 09:36:07,272 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:37:09] 2025-10-13 09:36:07,273 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:37:09] 2025-10-13 09:36:07,278 | INFO     | did not find any defunct processes belonging to 27916
[2025-10-13 05:37:09] 2025-10-13 09:36:07,282 | INFO     | did not find any defunct processes belonging to 27916
[2025-10-13 05:37:09] 2025-10-13 09:36:07,282 | INFO     | ready for new job
[2025-10-13 05:37:09] 2025-10-13 09:36:07,283 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:37:09] 2025-10-13 09:36:07,284 | INFO     | ***************************************
[2025-10-13 05:37:09] 2025-10-13 09:36:07,285 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:37:09] 2025-10-13 09:36:07,285 | INFO     | ***************************************
[2025-10-13 05:37:09] 2025-10-13 09:36:07,285 | INFO     | 
[2025-10-13 05:37:09] 2025-10-13 09:36:07,286 | INFO     | architecture information:
[2025-10-13 05:37:09] 2025-10-13 09:36:07,287 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:37:09] 2025-10-13 09:36:07,301 | INFO     | cat /etc/os-release:
[2025-10-13 05:37:09] NAME="CentOS Linux"
[2025-10-13 05:37:09] VERSION="7 (Core)"
[2025-10-13 05:37:09] ID="centos"
[2025-10-13 05:37:09] ID_LIKE="rhel fedora"
[2025-10-13 05:37:09] VERSION_ID="7"
[2025-10-13 05:37:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:37:09] ANSI_COLOR="0;31"
[2025-10-13 05:37:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:37:09] HOME_URL="https://www.centos.org/"
[2025-10-13 05:37:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:37:09] 
[2025-10-13 05:37:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:37:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:37:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:37:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:37:09] 
[2025-10-13 05:37:09] 2025-10-13 09:36:07,301 | INFO     | ***************************************
[2025-10-13 05:37:09] 2025-10-13 09:36:07,804 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 05:37:09] 2025-10-13 09:36:07,823 | INFO     | sufficient remaining disk space (28155314176 B)
[2025-10-13 05:37:09] 2025-10-13 09:36:07,824 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:37:09] 2025-10-13 09:36:07,824 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:37:09] 2025-10-13 09:36:07,824 | INFO     | update_server=False
[2025-10-13 05:37:09] 2025-10-13 09:36:07,824 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:37:09] 2025-10-13 09:36:07,825 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:37:09] 2025-10-13 09:36:08,295 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:37:09] 2025-10-13 09:36:08,296 | INFO     | aborting loop
[2025-10-13 05:37:09] 2025-10-13 09:36:08,648 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:37:09] 2025-10-13 09:36:08,741 | INFO     | all data control threads have been joined
[2025-10-13 05:37:09] 2025-10-13 09:36:08,830 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:08,831 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:08,885 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:37:09] 2025-10-13 09:36:08,896 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:08,942 | INFO     | all job control threads have been joined
[2025-10-13 05:37:09] 2025-10-13 09:36:09,009 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,044 | INFO     | all payload control threads have been joined
[2025-10-13 05:37:09] 2025-10-13 09:36:09,181 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,301 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,721 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,747 | INFO     | [data] control thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,795 | INFO     | [job] validate thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,946 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:09,948 | INFO     | [job] control thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:10,050 | INFO     | [payload] control thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:10,179 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:10,285 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:10,890 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:12,656 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:37:09] 2025-10-13 09:36:38,454 | INFO     | PID=21398 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 05:37:09] 2025-10-13 09:36:38,454 | INFO     | .. there are 3 such processes running
[2025-10-13 05:37:09] 2025-10-13 09:36:38,455 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:37:09] 2025-10-13 09:36:38,456 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:37:09] 2025-10-13 09:36:38,456 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:37:09] 2025-10-13 09:37:04,394 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:37:09] 2025-10-13 09:37:04,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635633571648)>', '<ExcThread(monitor, started 139635183298304)>']
[2025-10-13 05:37:09] 2025-10-13 09:37:04,575 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:37:09] 2025-10-13 09:37:04,576 | INFO     | [monitor] control thread has ended
[2025-10-13 05:37:09] 2025-10-13 09:37:09,586 | INFO     | all workflow threads have been joined
[2025-10-13 05:37:09] 2025-10-13 09:37:09,586 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:37:09] 2025-10-13 09:37:09,587 | INFO     | traces error code: 0
[2025-10-13 05:37:09] 2025-10-13 09:37:09,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:37:09] 2025-10-13 09:37:09,719 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:37:09] 2025-10-13 09:37:09,722 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:37:09] 2025-10-13 09:37:09,724 [wrapper] pilotpid: 21398
[2025-10-13 05:37:09] 2025-10-13 09:37:09,727 [wrapper] Pilot exit status: 0
[2025-10-13 05:37:09] 2025-10-13 09:37:09,738 [wrapper] pandaids: 6841069481
[2025-10-13 05:37:09] 2025-10-13 09:37:09,780 [wrapper] cleanup supervisor_pilot 18130 21399
[2025-10-13 05:37:09] 2025-10-13 09:37:09,784 [wrapper] Test setup, not cleaning
[2025-10-13 05:37:09] 2025-10-13 09:37:09,787 [wrapper] apfmon messages muted
[2025-10-13 05:37:09] 2025-10-13 09:37:09,789 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:37:09] 2025-10-13 09:37:09,792 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:37:09]  *** Error codes and diagnostics ***
[2025-10-13 05:37:09]     "exeErrorCode": 0,
[2025-10-13 05:37:09]     "exeErrorDiag": "",
[2025-10-13 05:37:09]     "pilotErrorCode": 0,
[2025-10-13 05:37:09]     "pilotErrorDiag": "",
[2025-10-13 05:37:09]  *** Listing of results directory ***
[2025-10-13 05:37:09] total 417504
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 20:57 queuedata.json
[2025-10-13 05:37:09] -rwx------ 1 boincer umatlas     36292 Oct 12 20:57 runpilot2-wrapper.sh
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:37:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:35 run_atlas
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:35 job.xml
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas 221009388 Oct 13 02:35 EVNT.46676267._004711.pool.root.1
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:35 start_atlas.sh
[2025-10-13 05:37:09] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:35 shared
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:35 input.tar.gz
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:35 boinc_lockfile
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:35 pandaJob.out
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas    973230 Oct 13 02:35 agis_schedconf.cvmfs.json
[2025-10-13 05:37:09] drwx------ 5 boincer umatlas      4096 Oct 13 02:35 pilot3
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas      5952 Oct 13 05:30 init_data.xml
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas 198739850 Oct 13 05:35 HITS.46676269._093613.pool.root.1
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas       530 Oct 13 05:35 boinc_task_state.xml
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas      1055 Oct 13 05:35 memory_monitor_summary.json
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas   1560580 Oct 13 05:35 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas    415754 Oct 13 05:36 log.46676269._093613.job.log.tgz.1
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas      7858 Oct 13 05:36 heartbeat.json
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas        95 Oct 13 05:36 pilot_heartbeat.json
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 05:36 boinc_mmap_file
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas        28 Oct 13 05:36 wrapper_checkpoint.txt
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas      4821 Oct 13 05:37 pilotlog.txt
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas   1517724 Oct 13 05:37 log.46676269._093613.job.log.1
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas       357 Oct 13 05:37 output.list
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas       620 Oct 13 05:37 runtime_log
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas   1955840 Oct 13 05:37 result.tar.gz
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas       662 Oct 13 05:37 s5mNDmu3LS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmwHmNDm4w5BDo.diag
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 05:37 runtime_log.err
[2025-10-13 05:37:09] -rw-r--r-- 1 boincer umatlas     20909 Oct 13 05:37 stderr.txt
[2025-10-13 05:37:09] HITS file was successfully produced:
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas 198739850 Oct 13 05:35 shared/HITS.pool.root.1
[2025-10-13 05:37:09]  *** Contents of shared directory: ***
[2025-10-13 05:37:09] total 412412
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas 221009388 Oct 13 02:35 ATLAS.root_0
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:35 start_atlas.sh
[2025-10-13 05:37:09] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:35 input.tar.gz
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas 198739850 Oct 13 05:35 HITS.pool.root.1
[2025-10-13 05:37:09] -rw------- 1 boincer umatlas   1955840 Oct 13 05:37 result.tar.gz
05:37:11 (17664): run_atlas exited; CPU time 81803.130339
05:37:11 (17664): called boinc_finish(0)

</stderr_txt>
]]>

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