Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:45:41 (1981093): wrapper (7.7.26015): starting
02:45:41 (1981093): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:45:41] Arguments: --nthreads 8
[2025-10-13 02:45:41] Threads: 8
[2025-10-13 02:45:41] Checking for CVMFS
[2025-10-13 02:45:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:45:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:45:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:45:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:45:41] 2.13.2.0 1483043 130358 532228 151652 0 238 39075238 40960000 41586 16776704 0 459736896 99.752 301673180 16709 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:45:41] CVMFS is ok
[2025-10-13 02:45:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:45:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:45:41] Further information can be found at the LHC@home message board.
[2025-10-13 02:45:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:45:41] Checking for apptainer binary...
[2025-10-13 02:45:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:45:41] Running /usr/bin/apptainer --version
[2025-10-13 02:45:41] apptainer version 1.4.3-1.el9
[2025-10-13 02:45:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:45:42] c7-4-30.aglt2.org
[2025-10-13 02:45:42] apptainer works
[2025-10-13 02:45:42] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:45:42] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:45:42] Starting ATLAS job with PandaID=6841124271
[2025-10-13 02:45:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:25:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:25:43] 2025-10-13 08:24:53,860 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 04:25:43] 2025-10-13 08:24:53,860 | INFO     | summary of transferred files:
[2025-10-13 04:25:43] 2025-10-13 08:24:53,861 | INFO     |  -- lfn=log.46676269._094179.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 04:25:43] 2025-10-13 08:24:53,861 | INFO     | stage-out finished correctly
[2025-10-13 04:25:43] 2025-10-13 08:24:55,427 | INFO     | time since job start (5933s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:24:55,890 | INFO     | monitor loop #402: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:24:55,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:24:56,393 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 04:25:43] 2025-10-13 08:24:57,442 | INFO     | time since job start (5935s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:24:58,395 | INFO     | monitor loop #403: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:24:58,395 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:24:58,708 | INFO     | job 6841124271 has state=finished
[2025-10-13 04:25:43] 2025-10-13 08:24:58,708 | INFO     | preparing for final server update for job 6841124271 in state='finished'
[2025-10-13 04:25:43] 2025-10-13 08:24:58,709 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:25:43] 2025-10-13 08:24:58,709 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:25:43] 2025-10-13 08:24:58,709 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:25:43] 2025-10-13 08:24:58,709 | INFO     | job 6841124271 has finished - writing final server update
[2025-10-13 04:25:43] 2025-10-13 08:24:58,712 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:25:43] 2025-10-13 08:24:58,713 | INFO     | executing command: lscpu
[2025-10-13 04:25:43] 2025-10-13 08:24:58,793 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:25:43] 2025-10-13 08:24:59,450 | INFO     | time since job start (5937s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:25:00,900 | INFO     | monitor loop #404: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:25:00,900 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:25:01,456 | INFO     | time since job start (5939s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:25:03,421 | INFO     | monitor loop #405: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:25:03,421 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:25:03,462 | INFO     | time since job start (5941s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:25:05,600 | INFO     | PID=1985088 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 04:25:43] 2025-10-13 08:25:05,601 | INFO     | .. there are 51 such processes running
[2025-10-13 04:25:43] 2025-10-13 08:25:05,928 | INFO     | monitor loop #406: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:25:05,928 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:25:06,602 | INFO     | time since job start (5944s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:25:08,432 | INFO     | monitor loop #407: job 0:6841124271 is in state 'finished'
[2025-10-13 04:25:43] 2025-10-13 08:25:08,454 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:25:43] 2025-10-13 08:25:08,609 | INFO     | time since job start (5946s) is within the limit (172800.0s)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,082 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:25:43] 2025-10-13 08:25:09,087 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3173.014291666667
[2025-10-13 04:25:43] 2025-10-13 08:25:09,099 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6841124271/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,100 | INFO     | extracted standard info from prmon json
[2025-10-13 04:25:43] 2025-10-13 08:25:09,100 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:25:43] 2025-10-13 08:25:09,101 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:25:43] 2025-10-13 08:25:09,101 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:25:43] 2025-10-13 08:25:09,101 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:25:43] 2025-10-13 08:25:09,102 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | sum of square deviations: 226052559.59999987
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | sum of deviations: -10414997008.6
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | mean x: 1760341022.6
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | mean y: 2231662.1222222224
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | -- intersect: 81107026568.83238
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | intersect: 81107026568.83238
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | chi2: 0.10300465713503225
[2025-10-13 04:25:43] 2025-10-13 08:25:09,103 | INFO     | -- intersect: 81107026568.83238
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | current memory leak: -46.07 B/s (using 90 data points, chi2=0.10)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | could have reported an average CPU frequency of 3192 MHz (7 samples)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | ..............................
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . Timing measurements:
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . get job = 0 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . initial setup = 2 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . payload setup = 11 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . stage-in = 0 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . payload execution = 5894 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . stage-out = 0 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,104 | INFO     | . log creation = 0 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,105 | INFO     | ..............................
[2025-10-13 04:25:43] 2025-10-13 08:25:09,175 | INFO     | 
[2025-10-13 04:25:43] 2025-10-13 08:25:09,175 | INFO     | job summary report
[2025-10-13 04:25:43] 2025-10-13 08:25:09,175 | INFO     | --------------------------------------------------
[2025-10-13 04:25:43] 2025-10-13 08:25:09,175 | INFO     | PanDA job id: 6841124271
[2025-10-13 04:25:43] 2025-10-13 08:25:09,175 | INFO     | task id: 46676269
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | errors: (none)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | pilot state: finished 
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | transexitcode: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | exeerrorcode: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | exeerrordiag: 
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | exitcode: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | exitmsg: OK
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | cpuconsumptiontime: 30040 s
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | nevents: 400
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | neventsw: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | pid: 1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | pgrp: 1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | corecount: 8
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | event service: False
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | sizes: {0: 2348635, 1: 2348834, 10: 2349096, 11: 2349124, 5910: 2376209, 5913: 2385207, 5916: 2385391, 5928: 2385585}
[2025-10-13 04:25:43] 2025-10-13 08:25:09,176 | INFO     | --------------------------------------------------
[2025-10-13 04:25:43] 2025-10-13 08:25:09,177 | INFO     | 
[2025-10-13 04:25:43] 2025-10-13 08:25:09,177 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-13 04:25:43] 2025-10-13 08:25:09,198 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,198 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,198 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,198 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:25:43] 2025-10-13 08:25:09,199 | INFO     | job 6841124271 has completed (purged errors)
[2025-10-13 04:25:43] 2025-10-13 08:25:09,200 | INFO     | overall cleanup function is called
[2025-10-13 04:25:43] 2025-10-13 08:25:10,208 | INFO     | --- collectZombieJob: --- 10, [1992163]
[2025-10-13 04:25:43] 2025-10-13 08:25:10,208 | INFO     | zombie collector waiting for pid 1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:10,208 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:25:43] 2025-10-13 08:25:10,208 | INFO     | collected zombie processes
[2025-10-13 04:25:43] 2025-10-13 08:25:10,208 | INFO     | will attempt to kill all subprocesses of pid=1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:10,822 | INFO     | process IDs to be killed: [1992163] (in reverse order)
[2025-10-13 04:25:43] 2025-10-13 08:25:11,071 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:25:43] 2025-10-13 08:25:11,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:25:43] 2025-10-13 08:25:11,096 | INFO     | did not find any defunct processes belonging to 1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:11,120 | INFO     | did not find any defunct processes belonging to 1992163
[2025-10-13 04:25:43] 2025-10-13 08:25:11,120 | INFO     | ready for new job
[2025-10-13 04:25:43] 2025-10-13 08:25:11,120 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:25:43] 2025-10-13 08:25:11,122 | INFO     | ***************************************
[2025-10-13 04:25:43] 2025-10-13 08:25:11,122 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:25:43] 2025-10-13 08:25:11,122 | INFO     | ***************************************
[2025-10-13 04:25:43] 2025-10-13 08:25:11,122 | INFO     | 
[2025-10-13 04:25:43] 2025-10-13 08:25:11,147 | INFO     | architecture information:
[2025-10-13 04:25:43] 2025-10-13 08:25:11,150 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:25:43] 2025-10-13 08:25:11,212 | INFO     | cat /etc/os-release:
[2025-10-13 04:25:43] NAME="CentOS Linux"
[2025-10-13 04:25:43] VERSION="7 (Core)"
[2025-10-13 04:25:43] ID="centos"
[2025-10-13 04:25:43] ID_LIKE="rhel fedora"
[2025-10-13 04:25:43] VERSION_ID="7"
[2025-10-13 04:25:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:25:43] ANSI_COLOR="0;31"
[2025-10-13 04:25:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:25:43] HOME_URL="https://www.centos.org/"
[2025-10-13 04:25:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:25:43] 
[2025-10-13 04:25:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:25:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:25:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:25:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:25:43] 
[2025-10-13 04:25:43] 2025-10-13 08:25:11,212 | INFO     | ***************************************
[2025-10-13 04:25:43] 2025-10-13 08:25:11,716 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-13 04:25:43] 2025-10-13 08:25:11,755 | INFO     | sufficient remaining disk space (127167102976 B)
[2025-10-13 04:25:43] 2025-10-13 08:25:11,755 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:25:43] 2025-10-13 08:25:11,756 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:25:43] 2025-10-13 08:25:11,756 | INFO     | update_server=False
[2025-10-13 04:25:43] 2025-10-13 08:25:11,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:25:43] 2025-10-13 08:25:11,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:25:43] 2025-10-13 08:25:11,920 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:25:43] 2025-10-13 08:25:11,967 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:25:43] 2025-10-13 08:25:11,967 | INFO     | aborting loop
[2025-10-13 04:25:43] 2025-10-13 08:25:12,028 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:25:43] 2025-10-13 08:25:12,322 | INFO     | all data control threads have been joined
[2025-10-13 04:25:43] 2025-10-13 08:25:12,761 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:12,973 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,038 | INFO     | all payload control threads have been joined
[2025-10-13 04:25:43] 2025-10-13 08:25:13,062 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,100 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,121 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,279 | INFO     | all job control threads have been joined
[2025-10-13 04:25:43] 2025-10-13 08:25:13,328 | INFO     | [data] control thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,480 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,635 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:13,900 | INFO     | [job] validate thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:14,041 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:14,045 | INFO     | [payload] control thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:14,193 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:25:43] 2025-10-13 08:25:14,285 | INFO     | [job] control thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:15,199 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:15,764 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:22,753 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:25:43] 2025-10-13 08:25:23,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:25:43] 2025-10-13 08:25:24,474 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140067144435520)>', '<ExcThread(monitor, started 140066668148480)>']
[2025-10-13 04:25:43] 2025-10-13 08:25:29,500 | INFO     | all workflow threads have been joined
[2025-10-13 04:25:43] 2025-10-13 08:25:29,500 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:25:43] 2025-10-13 08:25:29,500 | INFO     | traces error code: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:29,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:25:43] 2025-10-13 08:25:42,627 | INFO     | PID=1985088 has CPU usage=3.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:25:43] 2025-10-13 08:25:42,627 | INFO     | .. there are 51 such processes running
[2025-10-13 04:25:43] 2025-10-13 08:25:42,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:25:43] 2025-10-13 08:25:42,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:25:43] 2025-10-13 08:25:42,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:25:43] 2025-10-13 08:25:42,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:25:43] 2025-10-13 08:25:42,632 | INFO     | [monitor] control thread has ended
[2025-10-13 04:25:43] 2025-10-13 08:25:42,803 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:25:43] 2025-10-13 08:25:42,805 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:25:43] 2025-10-13 08:25:42,808 [wrapper] pilotpid: 1985088
[2025-10-13 04:25:43] 2025-10-13 08:25:42,809 [wrapper] Pilot exit status: 0
[2025-10-13 04:25:43] 2025-10-13 08:25:42,822 [wrapper] pandaids: 6841124271
[2025-10-13 04:25:43] 2025-10-13 08:25:43,084 [wrapper] cleanup supervisor_pilot 2511817 1985089
[2025-10-13 04:25:43] 2025-10-13 08:25:43,099 [wrapper] Test setup, not cleaning
[2025-10-13 04:25:43] 2025-10-13 08:25:43,126 [wrapper] apfmon messages muted
[2025-10-13 04:25:43] 2025-10-13 08:25:43,141 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:25:43] 2025-10-13 08:25:43,144 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:25:43]  *** Error codes and diagnostics ***
[2025-10-13 04:25:43]     "exeErrorCode": 0,
[2025-10-13 04:25:43]     "exeErrorDiag": "",
[2025-10-13 04:25:43]     "pilotErrorCode": 0,
[2025-10-13 04:25:43]     "pilotErrorDiag": "",
[2025-10-13 04:25:43]  *** Listing of results directory ***
[2025-10-13 04:25:43] total 409872
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:34 queuedata.json
[2025-10-13 04:25:43] -rwx------. 1 boincer umatlas     36292 Oct 12 21:35 runpilot2-wrapper.sh
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:25:43] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:45 run_atlas
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:45 job.xml
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas 223506768 Oct 13 02:45 EVNT.46676267._002383.pool.root.1
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:45 start_atlas.sh
[2025-10-13 04:25:43] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:45 shared
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 02:45 input.tar.gz
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:45 boinc_lockfile
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 02:45 pandaJob.out
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas    972849 Oct 13 02:45 agis_schedconf.cvmfs.json
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:46 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:25:43] drwx------. 5 boincer umatlas      4096 Oct 13 02:46 pilot3
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas      6937 Oct 13 04:22 init_data.xml
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas 189922805 Oct 13 04:24 HITS.46676269._094179.pool.root.1
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas       529 Oct 13 04:24 boinc_task_state.xml
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas      1032 Oct 13 04:24 memory_monitor_summary.json
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas    358265 Oct 13 04:24 log.46676269._094179.job.log.tgz.1
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas      7777 Oct 13 04:25 heartbeat.json
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:25 boinc_mmap_file
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:25 wrapper_checkpoint.txt
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas        95 Oct 13 04:25 pilot_heartbeat.json
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas       823 Oct 13 04:25 pilotlog.txt
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas    833254 Oct 13 04:25 log.46676269._094179.job.log.1
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas       357 Oct 13 04:25 output.list
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:25 runtime_log
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas   1208320 Oct 13 04:25 result.tar.gz
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas       651 Oct 13 04:25 wjZMDmaeMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmeNmNDmuxwOen.diag
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 04:25 runtime_log.err
[2025-10-13 04:25:43] -rw-r--r--. 1 boincer umatlas     22257 Oct 13 04:25 stderr.txt
[2025-10-13 04:25:43] HITS file was successfully produced:
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas 189922805 Oct 13 04:24 shared/HITS.pool.root.1
[2025-10-13 04:25:43]  *** Contents of shared directory: ***
[2025-10-13 04:25:43] total 405508
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas 223506768 Oct 13 02:45 ATLAS.root_0
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:45 start_atlas.sh
[2025-10-13 04:25:43] -rw-r--r--. 2 boincer umatlas    569684 Oct 13 02:45 input.tar.gz
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas 189922805 Oct 13 04:24 HITS.pool.root.1
[2025-10-13 04:25:43] -rw-------. 1 boincer umatlas   1208320 Oct 13 04:25 result.tar.gz
04:25:45 (1981093): run_atlas exited; CPU time 30236.223356
04:25:45 (1981093): called boinc_finish(0)

</stderr_txt>
]]>

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