Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:46:54 (2994346): wrapper (7.7.26015): starting
22:46:54 (2994346): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 22:46:54] Arguments: --nthreads 6
[2025-10-13 22:46:54] Threads: 6
[2025-10-13 22:46:54] Checking for CVMFS
[2025-10-13 22:46:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:46:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:46:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:46:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:46:55] 2.11.5.0 3385007 5928 98460 151662 1 187 13696636 20971520 869 130560 0 11803645 99.996 200429 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 22:46:55] CVMFS is ok
[2025-10-13 22:46:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:46:55] Checking for apptainer binary...
[2025-10-13 22:46:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:46:55] Running /usr/bin/apptainer --version
[2025-10-13 22:46:55] apptainer version 1.3.6-1.el9
[2025-10-13 22:46:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:46:55] testio006
[2025-10-13 22:46:55] apptainer works
[2025-10-13 22:46:55] Set ATHENA_PROC_NUMBER=6
[2025-10-13 22:46:55] Set ATHENA_CORE_NUMBER=6
[2025-10-13 22:46:55] Starting ATLAS job with PandaID=6840969493
[2025-10-13 22:46:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:10:15]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:10:15] 2025-10-13 15:09:13,468 | INFO     | time since job start (4930s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:15,474 | INFO     | time since job start (4932s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:15,490 | INFO     | monitor loop #389: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:15,490 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:17,479 | INFO     | time since job start (4934s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:17,993 | INFO     | monitor loop #390: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:17,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:19,485 | INFO     | time since job start (4936s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:20,496 | INFO     | monitor loop #391: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:20,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:21,490 | INFO     | time since job start (4938s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:22,999 | INFO     | monitor loop #392: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:22,999 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:23,495 | INFO     | time since job start (4940s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:25,498 | INFO     | time since job start (4942s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:25,502 | INFO     | monitor loop #393: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:25,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:27,504 | INFO     | time since job start (4944s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:28,005 | INFO     | monitor loop #394: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:28,005 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:29,509 | INFO     | time since job start (4946s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:30,508 | INFO     | monitor loop #395: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:30,508 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:30,616 | INFO     | PID=2998119 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:10:15] 2025-10-13 15:09:30,616 | INFO     | .. there are 2 such processes running
[2025-10-14 00:10:15] 2025-10-13 15:09:31,616 | INFO     | time since job start (4948s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:33,011 | INFO     | monitor loop #396: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:33,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:33,622 | INFO     | time since job start (4950s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:35,514 | INFO     | monitor loop #397: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:35,515 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:35,627 | INFO     | time since job start (4952s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:37,633 | INFO     | time since job start (4954s) is within the limit (172800.0s)
[2025-10-14 00:10:15] 2025-10-13 15:09:38,017 | INFO     | monitor loop #398: job 0:6840969493 is in state 'finished'
[2025-10-14 00:10:15] 2025-10-13 15:09:38,018 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,040 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 00:10:15] 2025-10-13 15:09:39,042 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4016.7144375000003
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6840969493/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | INFO     | extracted standard info from prmon json
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 00:10:15] 2025-10-13 15:09:39,044 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 00:10:15] 2025-10-13 15:09:39,045 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | sum of square deviations: 120605052.0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | sum of deviations: -1060586443.0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | mean x: 1760365743.0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | mean y: 2471691.684931507
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | -- intersect: 15482918080.841349
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | intersect: 15482918080.841349
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | chi2: 0.09286346210095953
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | -- intersect: 15482918080.841349
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | current memory leak: -8.79 B/s (using 73 data points, chi2=0.09)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | could have reported an average CPU frequency of 4026 MHz (6 samples)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | ..............................
[2025-10-14 00:10:15] 2025-10-13 15:09:39,046 | INFO     | . Timing measurements:
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . get job = 0 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . initial setup = 4 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . payload setup = 2 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . stage-in = 0 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . payload execution = 4875 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . stage-out = 0 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | . log creation = 0 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,047 | INFO     | ..............................
[2025-10-14 00:10:15] 2025-10-13 15:09:39,097 | INFO     | 
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | job summary report
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | --------------------------------------------------
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | PanDA job id: 6840969493
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | task id: 46676269
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | errors: (none)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | pilot state: finished 
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | transexitcode: 0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | exeerrorcode: 0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | exeerrordiag: 
[2025-10-14 00:10:15] 2025-10-13 15:09:39,098 | INFO     | exitcode: 0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | exitmsg: OK
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | cpuconsumptiontime: 26459 s
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | nevents: 400
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | neventsw: 0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | pid: 3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | pgrp: 3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | corecount: 6
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | event service: False
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | sizes: {0: 2348028, 1: 2348884, 3: 2349146, 11: 2349174, 4882: 2375461, 4883: 2384643, 4942: 2384781}
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | --------------------------------------------------
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | 
[2025-10-14 00:10:15] 2025-10-13 15:09:39,099 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,115 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | job 6840969493 has completed (purged errors)
[2025-10-14 00:10:15] 2025-10-13 15:09:39,116 | INFO     | overall cleanup function is called
[2025-10-14 00:10:15] 2025-10-13 15:09:40,122 | INFO     | --- collectZombieJob: --- 10, [3004824]
[2025-10-14 00:10:15] 2025-10-13 15:09:40,123 | INFO     | zombie collector waiting for pid 3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:40,123 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:10:15] 2025-10-13 15:09:40,123 | INFO     | collected zombie processes
[2025-10-14 00:10:15] 2025-10-13 15:09:40,123 | INFO     | will attempt to kill all subprocesses of pid=3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:40,188 | INFO     | process IDs to be killed: [3004824] (in reverse order)
[2025-10-14 00:10:15] 2025-10-13 15:09:40,226 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:10:15] 2025-10-13 15:09:40,226 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:10:15] 2025-10-13 15:09:40,229 | INFO     | did not find any defunct processes belonging to 3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:40,231 | INFO     | did not find any defunct processes belonging to 3004824
[2025-10-14 00:10:15] 2025-10-13 15:09:40,231 | INFO     | ready for new job
[2025-10-14 00:10:15] 2025-10-13 15:09:40,231 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:10:15] 2025-10-13 15:09:40,232 | INFO     | ***************************************
[2025-10-14 00:10:15] 2025-10-13 15:09:40,232 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 00:10:15] 2025-10-13 15:09:40,232 | INFO     | ***************************************
[2025-10-14 00:10:15] 2025-10-13 15:09:40,232 | INFO     | 
[2025-10-14 00:10:15] 2025-10-13 15:09:40,233 | INFO     | architecture information:
[2025-10-14 00:10:15] 2025-10-13 15:09:40,233 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:10:15] 2025-10-13 15:09:40,243 | INFO     | cat /etc/os-release:
[2025-10-14 00:10:15] NAME="CentOS Linux"
[2025-10-14 00:10:15] VERSION="7 (Core)"
[2025-10-14 00:10:15] ID="centos"
[2025-10-14 00:10:15] ID_LIKE="rhel fedora"
[2025-10-14 00:10:15] VERSION_ID="7"
[2025-10-14 00:10:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:10:15] ANSI_COLOR="0;31"
[2025-10-14 00:10:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:10:15] HOME_URL="https://www.centos.org/"
[2025-10-14 00:10:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:10:15] 
[2025-10-14 00:10:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:10:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:10:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:10:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:10:15] 
[2025-10-14 00:10:15] 2025-10-13 15:09:40,244 | INFO     | ***************************************
[2025-10-14 00:10:15] 2025-10-13 15:09:40,746 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | INFO     | sufficient remaining disk space (84889567232 B)
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | INFO     | update_server=False
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:10:15] 2025-10-13 15:09:40,756 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:10:15] 2025-10-13 15:09:40,757 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:10:15] 2025-10-13 15:09:41,056 | INFO     | all data control threads have been joined
[2025-10-14 00:10:15] 2025-10-13 15:09:41,526 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:10:15] 2025-10-13 15:09:41,526 | INFO     | aborting loop
[2025-10-14 00:10:15] 2025-10-13 15:09:41,758 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:41,762 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:41,993 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,059 | INFO     | [data] control thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,144 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,189 | INFO     | all payload control threads have been joined
[2025-10-14 00:10:15] 2025-10-13 15:09:42,426 | INFO     | all job control threads have been joined
[2025-10-14 00:10:15] 2025-10-13 15:09:42,531 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,676 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,702 | INFO     | [job] validate thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,730 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,762 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,801 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:42,870 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:43,195 | INFO     | [payload] control thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:43,431 | INFO     | [job] control thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:44,762 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:09:51,560 | INFO     | job.realtimelogging is not enabled
[2025-10-14 00:10:15] 2025-10-13 15:09:52,565 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:10:15] 2025-10-13 15:10:09,714 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:10:15] 2025-10-13 15:10:10,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139649600489280)>', '<ExcThread(monitor, started 139648823183104)>']
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | INFO     | PID=2998119 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | INFO     | .. there are 2 such processes running
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:10:15] 2025-10-13 15:10:10,807 | INFO     | [monitor] control thread has ended
[2025-10-14 00:10:15] 2025-10-13 15:10:15,061 | INFO     | all workflow threads have been joined
[2025-10-14 00:10:15] 2025-10-13 15:10:15,062 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:10:15] 2025-10-13 15:10:15,062 | INFO     | traces error code: 0
[2025-10-14 00:10:15] 2025-10-13 15:10:15,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:10:15] 2025-10-13 15:10:15,135 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:10:15] 2025-10-13 15:10:15,137 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:10:15] 2025-10-13 15:10:15,139 [wrapper] pilotpid: 2998119
[2025-10-14 00:10:15] 2025-10-13 15:10:15,140 [wrapper] Pilot exit status: 0
[2025-10-14 00:10:15] 2025-10-13 15:10:15,147 [wrapper] pandaids: 6840969493
[2025-10-14 00:10:15] 2025-10-13 15:10:15,173 [wrapper] cleanup supervisor_pilot 3040920 2998120
[2025-10-14 00:10:15] 2025-10-13 15:10:15,175 [wrapper] Test setup, not cleaning
[2025-10-14 00:10:15] 2025-10-13 15:10:15,176 [wrapper] apfmon messages muted
[2025-10-14 00:10:15] 2025-10-13 15:10:15,178 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:10:15] 2025-10-13 15:10:15,180 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:10:15]  *** Error codes and diagnostics ***
[2025-10-14 00:10:15]     "exeErrorCode": 0,
[2025-10-14 00:10:15]     "exeErrorDiag": "",
[2025-10-14 00:10:15]     "pilotErrorCode": 0,
[2025-10-14 00:10:15]     "pilotErrorDiag": "",
[2025-10-14 00:10:15]  *** Listing of results directory ***
[2025-10-14 00:10:15] total 423944
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc    557409 Oct 13 08:11 pilot3.tar.gz
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc      5112 Oct 13 08:41 queuedata.json
[2025-10-14 00:10:15] -rwx------. 1 boinc boinc     36292 Oct 13 08:41 runpilot2-wrapper.sh
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc       100 Oct 13 22:46 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:10:15] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 22:46 run_atlas
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc       105 Oct 13 22:46 job.xml
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc      9465 Oct 13 22:46 init_data.xml
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc 223561730 Oct 13 22:46 EVNT.46676267._004662.pool.root.1
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:46 start_atlas.sh
[2025-10-14 00:10:15] drwxrwx--x. 2 boinc boinc        68 Oct 13 22:46 shared
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:46 input.tar.gz
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc         0 Oct 13 22:46 boinc_lockfile
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc      2549 Oct 13 22:46 pandaJob.out
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc    972489 Oct 13 22:46 agis_schedconf.cvmfs.json
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc   1560580 Oct 13 22:47 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:10:15] drwx------. 5 boinc boinc      4096 Oct 13 22:47 pilot3
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc 204574213 Oct 14 00:08 HITS.46676269._092339.pool.root.1
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc      1015 Oct 14 00:08 memory_monitor_summary.json
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc       529 Oct 14 00:08 boinc_task_state.xml
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc    311059 Oct 14 00:08 log.46676269._092339.job.log.tgz.1
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc        95 Oct 14 00:09 pilot_heartbeat.json
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc      7753 Oct 14 00:09 heartbeat.json
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc      8192 Oct 14 00:10 boinc_mmap_file
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc        27 Oct 14 00:10 wrapper_checkpoint.txt
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc      4895 Oct 14 00:10 pilotlog.txt
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc    738816 Oct 14 00:10 log.46676269._092339.job.log.1
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc       357 Oct 14 00:10 output.list
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc       620 Oct 14 00:10 runtime_log
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc   1064960 Oct 14 00:10 result.tar.gz
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc       641 Oct 14 00:10 ZE1NDm1rKS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmp4lNDmfQ5Ztn.diag
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc      8661 Oct 14 00:10 runtime_log.err
[2025-10-14 00:10:15] -rw-r--r--. 1 boinc boinc     21934 Oct 14 00:10 stderr.txt
[2025-10-14 00:10:15] HITS file was successfully produced:
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc 204574213 Oct 14 00:08 shared/HITS.pool.root.1
[2025-10-14 00:10:15]  *** Contents of shared directory: ***
[2025-10-14 00:10:15] total 419720
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc 223561730 Oct 13 22:46 ATLAS.root_0
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:46 start_atlas.sh
[2025-10-14 00:10:15] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:46 input.tar.gz
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc 204574213 Oct 14 00:08 HITS.pool.root.1
[2025-10-14 00:10:15] -rw-------. 1 boinc boinc   1064960 Oct 14 00:10 result.tar.gz
00:10:16 (2994346): run_atlas exited; CPU time 26500.808876
00:10:16 (2994346): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN