Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:16:02 (2578408): wrapper (7.7.26015): starting
18:16:02 (2578408): wrapper: running run_atlas (--nthreads 2)
[2025-10-13 18:16:02] Arguments: --nthreads 2
[2025-10-13 18:16:02] Threads: 2
[2025-10-13 18:16:02] Checking for CVMFS
[2025-10-13 18:16:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:16:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:16:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:16:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:16:03] 2.9.2.0 1226200 5875 60628 151667 1 56 28110689 36864000 0 130560 0 3547247 99.988 204918 945 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 18:16:03] CVMFS is ok
[2025-10-13 18:16:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:16:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:16:03] Further information can be found at the LHC@home message board.
[2025-10-13 18:16:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:16:03] Checking for apptainer binary...
[2025-10-13 18:16:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:16:03] Running /usr/bin/apptainer --version
[2025-10-13 18:16:03] apptainer version 1.4.1-1.1
[2025-10-13 18:16:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:16:03] thA337
[2025-10-13 18:16:03] apptainer works
[2025-10-13 18:16:03] Set ATHENA_PROC_NUMBER=2
[2025-10-13 18:16:03] Set ATHENA_CORE_NUMBER=2
[2025-10-13 18:16:03] Starting ATLAS job with PandaID=6841124575
[2025-10-13 18:16:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 20:18:33]  *** The last 200 lines of the pilot log: ***
[2025-10-13 20:18:33] 2025-10-13 18:17:45,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 20:18:33] 2025-10-13 18:17:45,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 20:18:33] 2025-10-13 18:17:46,174 | INFO     | all job control threads have been joined
[2025-10-13 20:18:33] 2025-10-13 18:17:46,566 | INFO     | all data control threads have been joined
[2025-10-13 20:18:33] 2025-10-13 18:17:46,643 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 20:18:33] 2025-10-13 18:17:46,910 | INFO     | all payload control threads have been joined
[2025-10-13 20:18:33] 2025-10-13 18:17:46,927 | INFO     | [job] job monitor thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:46,928 | INFO     | [job] retrieve thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:46,929 | INFO     | [job] queue monitor thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,046 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,078 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 20:18:33] 2025-10-13 18:17:47,088 | INFO     | [job] validate thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,160 | INFO     | [payload] failed_post thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,179 | INFO     | [job] control thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,348 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,359 | INFO     | [data] copytool_in thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,572 | INFO     | [data] control thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,606 | INFO     | [payload] validate_post thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,824 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:47,916 | INFO     | [payload] control thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:49,083 | INFO     | [data] copytool_out thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:17:50,649 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 20:18:33] 2025-10-13 18:18:27,660 | INFO     | [monitor] cgroup control has ended
[2025-10-13 20:18:33] 2025-10-13 18:18:28,027 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140040174147392)>', '<ExcThread(monitor, started 140039522596608)>']
[2025-10-13 20:18:33] 2025-10-13 18:18:28,123 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 20:18:33] 2025-10-13 18:18:28,123 | INFO     | [monitor] control thread has ended
[2025-10-13 20:18:33] 2025-10-13 18:18:33,053 | INFO     | all workflow threads have been joined
[2025-10-13 20:18:33] 2025-10-13 18:18:33,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 20:18:33] 2025-10-13 18:18:33,055 | INFO     | traces error code: 0
[2025-10-13 20:18:33] 2025-10-13 18:18:33,055 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 20:18:33] 2025-10-13 18:18:33,097 [wrapper] ==== pilot stdout END ====
[2025-10-13 20:18:33] 2025-10-13 18:18:33,099 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 20:18:33] 2025-10-13 18:18:33,101 [wrapper] pilotpid: 2582103
[2025-10-13 20:18:33] 2025-10-13 18:18:33,103 [wrapper] Pilot exit status: 0
[2025-10-13 20:18:33] 2025-10-13 18:18:33,109 [wrapper] pandaids: 6841124575
[2025-10-13 20:18:33] 2025-10-13 18:18:33,121 [wrapper] cleanup supervisor_pilot 2602735 2582104
[2025-10-13 20:18:33] 2025-10-13 18:18:33,123 [wrapper] Test setup, not cleaning
[2025-10-13 20:18:33] 2025-10-13 18:18:33,125 [wrapper] apfmon messages muted
[2025-10-13 20:18:33] 2025-10-13 18:18:33,127 [wrapper] ==== wrapper stdout END ====
[2025-10-13 20:18:33] 2025-10-13 18:18:33,129 [wrapper] ==== wrapper stderr END ====
[2025-10-13 20:18:33]  *** Error codes and diagnostics ***
[2025-10-13 20:18:33]     "exeErrorCode": 0,
[2025-10-13 20:18:33]     "exeErrorDiag": "",
[2025-10-13 20:18:33]     "pilotErrorCode": 0,
[2025-10-13 20:18:33]     "pilotErrorDiag": "",
[2025-10-13 20:18:33]  *** Listing of results directory ***
[2025-10-13 20:18:33] total 404816
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:58 queuedata.json
[2025-10-13 20:18:33] -rwx------ 1 boinc boinc     36292 Oct 13 03:59 runpilot2-wrapper.sh
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 20:18:33] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:16 run_atlas
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:16 job.xml
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc 218206666 Oct 13 18:16 EVNT.46676267._004373.pool.root.1
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc    569683 Oct 13 18:16 input.tar.gz
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:16 start_atlas.sh
[2025-10-13 20:18:33] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:16 shared
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:16 boinc_setup_complete
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      6206 Oct 13 18:16 init_data.xml
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:16 boinc_lockfile
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:16 pandaJob.out
[2025-10-13 20:18:33] -rw------- 1 boinc boinc    972783 Oct 13 18:16 agis_schedconf.cvmfs.json
[2025-10-13 20:18:33] -rw------- 1 boinc boinc   1560580 Oct 13 18:16 agis_ddmendpoints.agis.ALL.json
[2025-10-13 20:18:33] drwx------ 5 boinc boinc      4096 Oct 13 18:16 pilot3
[2025-10-13 20:18:33] -rw------- 1 boinc boinc        95 Oct 13 20:16 pilot_heartbeat.json
[2025-10-13 20:18:33] -rw------- 1 boinc boinc 189795195 Oct 13 20:17 HITS.46676269._094442.pool.root.1
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc       529 Oct 13 20:17 boinc_task_state.xml
[2025-10-13 20:18:33] -rw------- 1 boinc boinc      1013 Oct 13 20:17 memory_monitor_summary.json
[2025-10-13 20:18:33] -rw------- 1 boinc boinc    266327 Oct 13 20:17 log.46676269._094442.job.log.tgz.1
[2025-10-13 20:18:33] -rw------- 1 boinc boinc      7752 Oct 13 20:17 heartbeat.json
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      8192 Oct 13 20:18 boinc_mmap_file
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc        27 Oct 13 20:18 wrapper_checkpoint.txt
[2025-10-13 20:18:33] -rw------- 1 boinc boinc      4556 Oct 13 20:18 pilotlog.txt
[2025-10-13 20:18:33] -rw------- 1 boinc boinc   1052128 Oct 13 20:18 log.46676269._094442.job.log.1
[2025-10-13 20:18:33] -rw------- 1 boinc boinc       357 Oct 13 20:18 output.list
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc       620 Oct 13 20:18 runtime_log
[2025-10-13 20:18:33] -rw------- 1 boinc boinc   1341440 Oct 13 20:18 result.tar.gz
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      8777 Oct 13 20:18 runtime_log.err
[2025-10-13 20:18:33] -rw------- 1 boinc boinc       659 Oct 13 20:18 qqnKDmy1MS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmoQmNDm6UHW5m.diag
[2025-10-13 20:18:33] -rw-r--r-- 1 boinc boinc      6555 Oct 13 20:18 stderr.txt
[2025-10-13 20:18:33] HITS file was successfully produced:
[2025-10-13 20:18:33] -rw------- 1 boinc boinc 189795195 Oct 13 20:17 shared/HITS.pool.root.1
[2025-10-13 20:18:33]  *** Contents of shared directory: ***
[2025-10-13 20:18:33] total 400340
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc 218206666 Oct 13 18:16 ATLAS.root_0
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc    569683 Oct 13 18:16 input.tar.gz
[2025-10-13 20:18:33] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:16 start_atlas.sh
[2025-10-13 20:18:33] -rw------- 1 boinc boinc 189795195 Oct 13 20:17 HITS.pool.root.1
[2025-10-13 20:18:33] -rw------- 1 boinc boinc   1341440 Oct 13 20:18 result.tar.gz
20:18:34 (2578408): run_atlas exited; CPU time 14183.360690
20:18:34 (2578408): called boinc_finish(0)

</stderr_txt>
]]>

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