Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:34:13 (3666012): wrapper (7.7.26015): starting
18:34:13 (3666012): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 18:34:13] Arguments: --nthreads 3
[2025-10-13 18:34:13] Threads: 3
[2025-10-13 18:34:13] Checking for CVMFS
[2025-10-13 18:34:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:34:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:34:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:34:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:34:13] 2.9.2.0 1842130 5994 85656 151667 2 57 29834735 36864000 0 130560 0 4792113 99.991 205555 860 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 18:34:13] CVMFS is ok
[2025-10-13 18:34:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:34:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:34:13] Further information can be found at the LHC@home message board.
[2025-10-13 18:34:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:34:13] Checking for apptainer binary...
[2025-10-13 18:34:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:34:13] Running /usr/bin/apptainer --version
[2025-10-13 18:34:13] apptainer version 1.4.1-1.1
[2025-10-13 18:34:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:34:13] thA335a
[2025-10-13 18:34:13] apptainer works
[2025-10-13 18:34:13] Set ATHENA_PROC_NUMBER=3
[2025-10-13 18:34:13] Set ATHENA_CORE_NUMBER=3
[2025-10-13 18:34:13] Starting ATLAS job with PandaID=6840715331
[2025-10-13 18:34:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:52:30]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:52:30] 2025-10-13 17:52:07,037 | INFO     | executing command: cat /etc/os-release
[2025-10-13 19:52:30] 2025-10-13 17:52:07,046 | INFO     | cat /etc/os-release:
[2025-10-13 19:52:30] NAME="CentOS Linux"
[2025-10-13 19:52:30] VERSION="7 (Core)"
[2025-10-13 19:52:30] ID="centos"
[2025-10-13 19:52:30] ID_LIKE="rhel fedora"
[2025-10-13 19:52:30] VERSION_ID="7"
[2025-10-13 19:52:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:52:30] ANSI_COLOR="0;31"
[2025-10-13 19:52:30] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:52:30] HOME_URL="https://www.centos.org/"
[2025-10-13 19:52:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:52:30] 
[2025-10-13 19:52:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:52:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:52:30] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:52:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:52:30] 
[2025-10-13 19:52:30] 2025-10-13 17:52:07,046 | INFO     | ***************************************
[2025-10-13 19:52:30] 2025-10-13 17:52:07,549 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 19:52:30] 2025-10-13 17:52:07,562 | INFO     | sufficient remaining disk space (376157765632 B)
[2025-10-13 19:52:30] 2025-10-13 17:52:07,562 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | INFO     | update_server=False
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | INFO     | aborting loop
[2025-10-13 19:52:30] 2025-10-13 17:52:07,563 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:52:30] 2025-10-13 17:52:07,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:52:30] 2025-10-13 17:52:07,978 | INFO     | all job control threads have been joined
[2025-10-13 19:52:30] 2025-10-13 17:52:08,158 | INFO     | all data control threads have been joined
[2025-10-13 19:52:30] 2025-10-13 17:52:08,568 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:08,569 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:08,569 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:08,827 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:08,984 | INFO     | [job] control thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,035 | INFO     | all payload control threads have been joined
[2025-10-13 19:52:30] 2025-10-13 17:52:09,164 | INFO     | [data] control thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,369 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,379 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:52:30] 2025-10-13 17:52:09,395 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,570 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,695 | INFO     | [job] validate thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,710 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,720 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,740 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:09,822 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:10,040 | INFO     | [payload] control thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:13,387 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:52:30] 2025-10-13 17:52:24,519 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:52:30] 2025-10-13 17:52:25,741 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140219518232384)>', '<ExcThread(monitor, started 140218795550464)>']
[2025-10-13 19:52:30] 2025-10-13 17:52:26,665 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:52:30] 2025-10-13 17:52:26,665 | INFO     | [monitor] control thread has ended
[2025-10-13 19:52:30] 2025-10-13 17:52:30,766 | INFO     | all workflow threads have been joined
[2025-10-13 19:52:30] 2025-10-13 17:52:30,767 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:52:30] 2025-10-13 17:52:30,767 | INFO     | traces error code: 0
[2025-10-13 19:52:30] 2025-10-13 17:52:30,767 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:52:30] 2025-10-13 17:52:30,818 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:52:30] 2025-10-13 17:52:30,820 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:52:30] 2025-10-13 17:52:30,823 [wrapper] pilotpid: 3669731
[2025-10-13 19:52:30] 2025-10-13 17:52:30,825 [wrapper] Pilot exit status: 0
[2025-10-13 19:52:30] 2025-10-13 17:52:30,833 [wrapper] pandaids: 6840715331
[2025-10-13 19:52:30] 2025-10-13 17:52:30,850 [wrapper] cleanup supervisor_pilot 3688393 3669732
[2025-10-13 19:52:30] 2025-10-13 17:52:30,853 [wrapper] Test setup, not cleaning
[2025-10-13 19:52:30] 2025-10-13 17:52:30,855 [wrapper] apfmon messages muted
[2025-10-13 19:52:30] 2025-10-13 17:52:30,858 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:52:30] 2025-10-13 17:52:30,860 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:52:30]  *** Error codes and diagnostics ***
[2025-10-13 19:52:30]     "exeErrorCode": 0,
[2025-10-13 19:52:30]     "exeErrorDiag": "",
[2025-10-13 19:52:30]     "pilotErrorCode": 0,
[2025-10-13 19:52:30]     "pilotErrorDiag": "",
[2025-10-13 19:52:30]  *** Listing of results directory ***
[2025-10-13 19:52:30] total 410068
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      5112 Oct 12 22:08 queuedata.json
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc    557409 Oct 12 22:08 pilot3.tar.gz
[2025-10-13 19:52:30] -rwx------ 1 boinc boinc     36292 Oct 12 22:09 runpilot2-wrapper.sh
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:52:30] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:34 run_atlas
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:34 job.xml
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc 222250554 Oct 13 18:34 EVNT.46676267._004486.pool.root.1
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc    569677 Oct 13 18:34 input.tar.gz
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:34 start_atlas.sh
[2025-10-13 19:52:30] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:34 shared
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:34 boinc_setup_complete
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      6447 Oct 13 18:34 init_data.xml
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:34 boinc_lockfile
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      2549 Oct 13 18:34 pandaJob.out
[2025-10-13 19:52:30] -rw------- 1 boinc boinc    972783 Oct 13 18:34 agis_schedconf.cvmfs.json
[2025-10-13 19:52:30] -rw------- 1 boinc boinc   1560580 Oct 13 18:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:52:30] drwx------ 5 boinc boinc      4096 Oct 13 18:34 pilot3
[2025-10-13 19:52:30] -rw------- 1 boinc boinc 191904448 Oct 13 19:51 HITS.46676269._088283.pool.root.1
[2025-10-13 19:52:30] -rw------- 1 boinc boinc        95 Oct 13 19:51 pilot_heartbeat.json
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc       529 Oct 13 19:51 boinc_task_state.xml
[2025-10-13 19:52:30] -rw------- 1 boinc boinc      1013 Oct 13 19:51 memory_monitor_summary.json
[2025-10-13 19:52:30] -rw------- 1 boinc boinc    239422 Oct 13 19:51 log.46676269._088283.job.log.tgz.1
[2025-10-13 19:52:30] -rw------- 1 boinc boinc      7752 Oct 13 19:52 heartbeat.json
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc        27 Oct 13 19:52 wrapper_checkpoint.txt
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      8192 Oct 13 19:52 boinc_mmap_file
[2025-10-13 19:52:30] -rw------- 1 boinc boinc      4556 Oct 13 19:52 pilotlog.txt
[2025-10-13 19:52:30] -rw------- 1 boinc boinc    689100 Oct 13 19:52 log.46676269._088283.job.log.1
[2025-10-13 19:52:30] -rw------- 1 boinc boinc       357 Oct 13 19:52 output.list
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc       620 Oct 13 19:52 runtime_log
[2025-10-13 19:52:30] -rw------- 1 boinc boinc    952320 Oct 13 19:52 result.tar.gz
[2025-10-13 19:52:30] -rw------- 1 boinc boinc       659 Oct 13 19:52 vC3NDmyYHS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmCvUMDmgkjHGn.diag
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      8782 Oct 13 19:52 runtime_log.err
[2025-10-13 19:52:30] -rw-r--r-- 1 boinc boinc      8807 Oct 13 19:52 stderr.txt
[2025-10-13 19:52:30] HITS file was successfully produced:
[2025-10-13 19:52:30] -rw------- 1 boinc boinc 191904448 Oct 13 19:51 shared/HITS.pool.root.1
[2025-10-13 19:52:30]  *** Contents of shared directory: ***
[2025-10-13 19:52:30] total 405968
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc 222250554 Oct 13 18:34 ATLAS.root_0
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc    569677 Oct 13 18:34 input.tar.gz
[2025-10-13 19:52:30] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:34 start_atlas.sh
[2025-10-13 19:52:30] -rw------- 1 boinc boinc 191904448 Oct 13 19:51 HITS.pool.root.1
[2025-10-13 19:52:30] -rw------- 1 boinc boinc    952320 Oct 13 19:52 result.tar.gz
19:52:32 (3666012): run_atlas exited; CPU time 13314.630443
19:52:32 (3666012): called boinc_finish(0)

</stderr_txt>
]]>

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