Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:28:40 (31562): wrapper (7.7.26015): starting
02:28:40 (31562): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:28:40] Arguments: --nthreads 8
[2025-10-13 02:28:40] Threads: 8
[2025-10-13 02:28:40] Checking for CVMFS
[2025-10-13 02:28:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:28:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:28:40] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:28:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:28:40] 2.11.2.0 8814 53942 113884 151650 1 188 18310990 18432001 1833 130560 0 49303440 99.974 2419496 39844 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:28:40] CVMFS is ok
[2025-10-13 02:28:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:28:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:28:40] Further information can be found at the LHC@home message board.
[2025-10-13 02:28:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:28:40] Checking for apptainer binary...
[2025-10-13 02:28:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:28:40] Running /usr/bin/apptainer --version
[2025-10-13 02:28:40] apptainer version 1.3.2-1.el7
[2025-10-13 02:28:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:28:41] c-206-19.aglt2.org
[2025-10-13 02:28:41] apptainer works
[2025-10-13 02:28:41] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:28:41] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:28:41] Starting ATLAS job with PandaID=6840711677
[2025-10-13 02:28:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:36:16]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:36:16] 2025-10-13 09:35:31,942 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 05:36:16] 2025-10-13 09:35:31,943 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 05:36:16] 2025-10-13 09:35:31,948 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:36:16] 2025-10-13 09:35:31,949 | INFO     | sum of square deviations: 1931608310.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,950 | INFO     | sum of deviations: 27978798355.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,951 | INFO     | mean x: 1760342538.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,951 | INFO     | mean y: 2444657.5815217393
[2025-10-13 05:36:16] 2025-10-13 09:35:31,951 | INFO     | -- intersect: -25495617587.398415
[2025-10-13 05:36:16] 2025-10-13 09:35:31,951 | INFO     | intersect: -25495617587.398415
[2025-10-13 05:36:16] 2025-10-13 09:35:31,952 | INFO     | chi2: 2.344481081715241
[2025-10-13 05:36:16] 2025-10-13 09:35:31,952 | INFO     | sum of square deviations: 1778377530.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,954 | INFO     | sum of deviations: 39029436080.999985
[2025-10-13 05:36:16] 2025-10-13 09:35:31,954 | INFO     | mean x: 1760342386.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,954 | INFO     | mean y: 2455389.966480447
[2025-10-13 05:36:16] 2025-10-13 09:35:31,954 | INFO     | -- intersect: -38631169628.373695
[2025-10-13 05:36:16] 2025-10-13 09:35:31,954 | INFO     | intersect: -38631169628.373695
[2025-10-13 05:36:16] 2025-10-13 09:35:31,955 | INFO     | chi2: 1.5721450640870074
[2025-10-13 05:36:16] 2025-10-13 09:35:31,955 | INFO     | current chi2=1.5721450640870074 (change=32.94272765311403 %)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,955 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,957 | INFO     | sum of deviations: 37751191359.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,957 | INFO     | mean x: 1760342233.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,957 | INFO     | mean y: 2454044.3505747127
[2025-10-13 05:36:16] 2025-10-13 09:35:31,957 | INFO     | -- intersect: -40680824690.74237
[2025-10-13 05:36:16] 2025-10-13 09:35:31,958 | INFO     | intersect: -40680824690.74237
[2025-10-13 05:36:16] 2025-10-13 09:35:31,958 | INFO     | chi2: 1.5723362908921352
[2025-10-13 05:36:16] 2025-10-13 09:35:31,958 | INFO     | current chi2=1.5723362908921352 (change=-0.01216343259258288 %)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,958 | INFO     | right removable region: 173
[2025-10-13 05:36:16] 2025-10-13 09:35:31,959 | INFO     | sum of square deviations: 1778377530.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,960 | INFO     | sum of deviations: -2221514226.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,960 | INFO     | mean x: 1760342691.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,961 | INFO     | mean y: 2474397.586592179
[2025-10-13 05:36:16] 2025-10-13 09:35:31,961 | INFO     | -- intersect: 2201459857.4915104
[2025-10-13 05:36:16] 2025-10-13 09:35:31,961 | INFO     | intersect: 2201459857.4915104
[2025-10-13 05:36:16] 2025-10-13 09:35:31,961 | INFO     | chi2: 0.8375388057183172
[2025-10-13 05:36:16] 2025-10-13 09:35:31,961 | INFO     | current chi2=0.8375388057183172 (change=64.27615423087282 %)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,962 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,962 | INFO     | sum of deviations: -6810819183.499999
[2025-10-13 05:36:16] 2025-10-13 09:35:31,962 | INFO     | mean x: 1760342843.5
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | mean y: 2479161.9482758623
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | -- intersect: 7342288616.833102
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | intersect: 7342288616.833102
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | chi2: 0.7945431320383011
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | current chi2=0.7945431320383011 (change=5.133573917585916 %)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | left removable region: 20
[2025-10-13 05:36:16] 2025-10-13 09:35:31,963 | INFO     | sum of square deviations: 1110539892.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,964 | INFO     | sum of deviations: 2721501092.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,964 | INFO     | mean x: 1760342813.0
[2025-10-13 05:36:16] 2025-10-13 09:35:31,964 | INFO     | mean y: 2493158.9150326797
[2025-10-13 05:36:16] 2025-10-13 09:35:31,964 | INFO     | -- intersect: -4311422011.881779
[2025-10-13 05:36:16] 2025-10-13 09:35:31,965 | INFO     | intersect: -4311422011.881779
[2025-10-13 05:36:16] 2025-10-13 09:35:31,965 | INFO     | chi2: 0.00030615903768704713
[2025-10-13 05:36:16] 2025-10-13 09:35:31,965 | INFO     | -- intersect: -4311422011.881779
[2025-10-13 05:36:16] 2025-10-13 09:35:31,965 | INFO     | current memory leak: 2.45 B/s (using 153 data points, chi2=0.00)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,965 | INFO     | could have reported an average CPU frequency of 2543 MHz (10 samples)
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | ..............................
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . Timing measurements:
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . get job = 0 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . initial setup = 2 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . payload setup = 4 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . stage-in = 0 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . payload execution = 11168 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . stage-out = 2 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | . log creation = 0 s
[2025-10-13 05:36:16] 2025-10-13 09:35:31,966 | INFO     | ..............................
[2025-10-13 05:36:16] 2025-10-13 09:35:32,043 | INFO     | 
[2025-10-13 05:36:16] 2025-10-13 09:35:32,043 | INFO     | job summary report
[2025-10-13 05:36:16] 2025-10-13 09:35:32,043 | INFO     | --------------------------------------------------
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | PanDA job id: 6840711677
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | task id: 46676269
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | errors: (none)
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | pilot state: finished 
[2025-10-13 05:36:16] 2025-10-13 09:35:32,044 | INFO     | transexitcode: 0
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | exeerrorcode: 0
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | exeerrordiag: 
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | exitcode: 0
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | exitmsg: OK
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | cpuconsumptiontime: 84793 s
[2025-10-13 05:36:16] 2025-10-13 09:35:32,045 | INFO     | nevents: 400
[2025-10-13 05:36:16] 2025-10-13 09:35:32,046 | INFO     | neventsw: 0
[2025-10-13 05:36:16] 2025-10-13 09:35:32,046 | INFO     | pid: 9488
[2025-10-13 05:36:16] 2025-10-13 09:35:32,046 | INFO     | pgrp: 9488
[2025-10-13 05:36:16] 2025-10-13 09:35:32,046 | INFO     | corecount: 8
[2025-10-13 05:36:16] 2025-10-13 09:35:32,046 | INFO     | event service: False
[2025-10-13 05:36:16] 2025-10-13 09:35:32,047 | INFO     | sizes: {0: 2348029, 1: 2348885, 2: 2348885, 4: 2349175, 12: 2349203, 11176: 2378604, 11179: 2387658, 11184: 2387796}
[2025-10-13 05:36:16] 2025-10-13 09:35:32,047 | INFO     | --------------------------------------------------
[2025-10-13 05:36:16] 2025-10-13 09:35:32,047 | INFO     | 
[2025-10-13 05:36:16] 2025-10-13 09:35:32,047 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:36:16] 2025-10-13 09:35:32,063 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,065 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,065 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,065 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,065 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,065 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:36:16] 2025-10-13 09:35:32,066 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,067 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:36:16] 2025-10-13 09:35:32,067 | INFO     | job 6840711677 has completed (purged errors)
[2025-10-13 05:36:16] 2025-10-13 09:35:32,067 | INFO     | overall cleanup function is called
[2025-10-13 05:36:16] 2025-10-13 09:35:33,075 | INFO     | --- collectZombieJob: --- 10, [9488]
[2025-10-13 05:36:16] 2025-10-13 09:35:33,075 | INFO     | zombie collector waiting for pid 9488
[2025-10-13 05:36:16] 2025-10-13 09:35:33,075 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:36:16] 2025-10-13 09:35:33,075 | INFO     | collected zombie processes
[2025-10-13 05:36:16] 2025-10-13 09:35:33,075 | INFO     | will attempt to kill all subprocesses of pid=9488
[2025-10-13 05:36:16] 2025-10-13 09:35:33,239 | INFO     | process IDs to be killed: [9488] (in reverse order)
[2025-10-13 05:36:16] 2025-10-13 09:35:33,299 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:36:16] 2025-10-13 09:35:33,300 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:36:16] 2025-10-13 09:35:33,305 | INFO     | did not find any defunct processes belonging to 9488
[2025-10-13 05:36:16] 2025-10-13 09:35:33,310 | INFO     | did not find any defunct processes belonging to 9488
[2025-10-13 05:36:16] 2025-10-13 09:35:33,310 | INFO     | ready for new job
[2025-10-13 05:36:16] 2025-10-13 09:35:33,310 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:36:16] 2025-10-13 09:35:33,312 | INFO     | ***************************************
[2025-10-13 05:36:16] 2025-10-13 09:35:33,312 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:36:16] 2025-10-13 09:35:33,313 | INFO     | ***************************************
[2025-10-13 05:36:16] 2025-10-13 09:35:33,313 | INFO     | 
[2025-10-13 05:36:16] 2025-10-13 09:35:33,314 | INFO     | architecture information:
[2025-10-13 05:36:16] 2025-10-13 09:35:33,314 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:36:16] 2025-10-13 09:35:33,328 | INFO     | cat /etc/os-release:
[2025-10-13 05:36:16] NAME="CentOS Linux"
[2025-10-13 05:36:16] VERSION="7 (Core)"
[2025-10-13 05:36:16] ID="centos"
[2025-10-13 05:36:16] ID_LIKE="rhel fedora"
[2025-10-13 05:36:16] VERSION_ID="7"
[2025-10-13 05:36:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:36:16] ANSI_COLOR="0;31"
[2025-10-13 05:36:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:36:16] HOME_URL="https://www.centos.org/"
[2025-10-13 05:36:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:36:16] 
[2025-10-13 05:36:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:36:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:36:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:36:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:36:16] 
[2025-10-13 05:36:16] 2025-10-13 09:35:33,329 | INFO     | ***************************************
[2025-10-13 05:36:16] 2025-10-13 09:35:33,829 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:36:16] 2025-10-13 09:35:33,847 | INFO     | sufficient remaining disk space (28056748032 B)
[2025-10-13 05:36:16] 2025-10-13 09:35:33,847 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:36:16] 2025-10-13 09:35:33,848 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:36:16] 2025-10-13 09:35:33,848 | INFO     | update_server=False
[2025-10-13 05:36:16] 2025-10-13 09:35:33,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:36:16] 2025-10-13 09:35:33,848 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:36:16] 2025-10-13 09:35:33,848 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:36:16] 2025-10-13 09:35:33,912 | INFO     | all data control threads have been joined
[2025-10-13 05:36:16] 2025-10-13 09:35:33,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:36:16] 2025-10-13 09:35:33,963 | INFO     | aborting loop
[2025-10-13 05:36:16] 2025-10-13 09:35:34,093 | INFO     | all job control threads have been joined
[2025-10-13 05:36:16] 2025-10-13 09:35:34,223 | INFO     | all payload control threads have been joined
[2025-10-13 05:36:16] 2025-10-13 09:35:34,540 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:36:16] 2025-10-13 09:35:34,853 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:34,854 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:34,915 | INFO     | [data] control thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:34,969 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:34,969 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,095 | INFO     | [job] control thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,228 | INFO     | [payload] control thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,418 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,544 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,638 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,693 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:35,984 | INFO     | [job] validate thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:36,220 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:36,546 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:37,856 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:35:44,030 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:36:16] 2025-10-13 09:35:45,035 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:36:16] 2025-10-13 09:36:04,152 | INFO     | PID=2884 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 05:36:16] 2025-10-13 09:36:04,152 | INFO     | .. there are 3 such processes running
[2025-10-13 05:36:16] 2025-10-13 09:36:04,153 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:36:16] 2025-10-13 09:36:04,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:36:16] 2025-10-13 09:36:04,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:36:16] 2025-10-13 09:36:09,837 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:36:16] 2025-10-13 09:36:10,947 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140233752053568)>', '<ExcThread(monitor, started 140233081345792)>']
[2025-10-13 05:36:16] 2025-10-13 09:36:11,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:36:16] 2025-10-13 09:36:11,186 | INFO     | [monitor] control thread has ended
[2025-10-13 05:36:16] 2025-10-13 09:36:15,970 | INFO     | all workflow threads have been joined
[2025-10-13 05:36:16] 2025-10-13 09:36:15,971 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:36:16] 2025-10-13 09:36:15,971 | INFO     | traces error code: 0
[2025-10-13 05:36:16] 2025-10-13 09:36:15,971 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:36:16] 2025-10-13 09:36:16,108 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:36:16] 2025-10-13 09:36:16,111 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:36:16] 2025-10-13 09:36:16,117 [wrapper] pilotpid: 2884
[2025-10-13 05:36:16] 2025-10-13 09:36:16,120 [wrapper] Pilot exit status: 0
[2025-10-13 05:36:16] 2025-10-13 09:36:16,129 [wrapper] pandaids: 6840711677
[2025-10-13 05:36:16] 2025-10-13 09:36:16,165 [wrapper] cleanup supervisor_pilot 23686 2885
[2025-10-13 05:36:16] 2025-10-13 09:36:16,167 [wrapper] Test setup, not cleaning
[2025-10-13 05:36:16] 2025-10-13 09:36:16,170 [wrapper] apfmon messages muted
[2025-10-13 05:36:16] 2025-10-13 09:36:16,173 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:36:16] 2025-10-13 09:36:16,175 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:36:16]  *** Error codes and diagnostics ***
[2025-10-13 05:36:16]     "exeErrorCode": 0,
[2025-10-13 05:36:16]     "exeErrorDiag": "",
[2025-10-13 05:36:16]     "pilotErrorCode": 0,
[2025-10-13 05:36:16]     "pilotErrorDiag": "",
[2025-10-13 05:36:16]  *** Listing of results directory ***
[2025-10-13 05:36:16] total 418360
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 14:53 pilot3.tar.gz
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 15:18 queuedata.json
[2025-10-13 05:36:16] -rwx------ 1 boincer umatlas     36292 Oct 12 15:18 runpilot2-wrapper.sh
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:36:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:28 run_atlas
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:28 job.xml
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas 220171786 Oct 13 02:28 EVNT.46676267._004444.pool.root.1
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:28 input.tar.gz
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 05:36:16] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:28 shared
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:28 boinc_lockfile
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:28 pandaJob.out
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas    973230 Oct 13 02:28 agis_schedconf.cvmfs.json
[2025-10-13 05:36:16] drwx------ 5 boincer umatlas      4096 Oct 13 02:28 pilot3
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 05:31 init_data.xml
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas 200317250 Oct 13 05:34 HITS.46676269._087245.pool.root.1
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas       530 Oct 13 05:35 boinc_task_state.xml
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas      1055 Oct 13 05:35 memory_monitor_summary.json
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas   1560580 Oct 13 05:35 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas    427484 Oct 13 05:35 log.46676269._087245.job.log.tgz.1
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas      7870 Oct 13 05:35 heartbeat.json
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas        95 Oct 13 05:36 pilot_heartbeat.json
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 05:36 boinc_mmap_file
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas        28 Oct 13 05:36 wrapper_checkpoint.txt
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas      4892 Oct 13 05:36 pilotlog.txt
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas   1578336 Oct 13 05:36 log.46676269._087245.job.log.1
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas       357 Oct 13 05:36 output.list
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas       620 Oct 13 05:36 runtime_log
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas   2027520 Oct 13 05:36 result.tar.gz
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 05:36 runtime_log.err
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas       662 Oct 13 05:36 ATjLDmolGS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmymUMDmyqeGim.diag
[2025-10-13 05:36:16] -rw-r--r-- 1 boincer umatlas     20854 Oct 13 05:36 stderr.txt
[2025-10-13 05:36:16] HITS file was successfully produced:
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas 200317250 Oct 13 05:34 shared/HITS.pool.root.1
[2025-10-13 05:36:16]  *** Contents of shared directory: ***
[2025-10-13 05:36:16] total 413196
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas 220171786 Oct 13 02:28 ATLAS.root_0
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:28 input.tar.gz
[2025-10-13 05:36:16] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas 200317250 Oct 13 05:34 HITS.pool.root.1
[2025-10-13 05:36:16] -rw------- 1 boincer umatlas   2027520 Oct 13 05:36 result.tar.gz
05:36:18 (31562): run_atlas exited; CPU time 84927.949494
05:36:18 (31562): called boinc_finish(0)

</stderr_txt>
]]>

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