Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
23:06:32 (3107841): wrapper (7.7.26015): starting
23:06:32 (3107841): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 23:06:32] Arguments: --nthreads 3
[2025-10-13 23:06:32] Threads: 3
[2025-10-13 23:06:32] Checking for CVMFS
[2025-10-13 23:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 23:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 23:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 23:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 23:06:32] 2.9.2.0 1204004 6200 83184 151672 0 57 4493338 36864001 0 130560 0 4794916 99.991 209232 750 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 23:06:32] CVMFS is ok
[2025-10-13 23:06:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 23:06:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 23:06:32] Further information can be found at the LHC@home message board.
[2025-10-13 23:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 23:06:32] Checking for apptainer binary...
[2025-10-13 23:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 23:06:32] Running /usr/bin/apptainer --version
[2025-10-13 23:06:32] apptainer version 1.4.1-1.1
[2025-10-13 23:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 23:06:32] thA312
[2025-10-13 23:06:32] apptainer works
[2025-10-13 23:06:32] Set ATHENA_PROC_NUMBER=3
[2025-10-13 23:06:32] Set ATHENA_CORE_NUMBER=3
[2025-10-13 23:06:32] Starting ATLAS job with PandaID=6826079513
[2025-10-13 23:06:32] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:52:51]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:52:51] 2025-10-13 22:52:10,972 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:52:51] 2025-10-13 22:52:10,972 | INFO     | aborting loop
[2025-10-14 00:52:51] 2025-10-13 22:52:11,394 | INFO     | all data control threads have been joined
[2025-10-14 00:52:51] 2025-10-13 22:52:11,590 | INFO     | all job control threads have been joined
[2025-10-14 00:52:51] 2025-10-13 22:52:11,976 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:11,977 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:11,977 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,216 | INFO     | all payload control threads have been joined
[2025-10-14 00:52:51] 2025-10-13 22:52:12,394 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,400 | INFO     | [data] control thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,445 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,595 | INFO     | [job] control thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,749 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,816 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,933 | INFO     | [job] validate thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:12,978 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:13,012 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:13,018 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:13,063 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:52:51] 2025-10-13 22:52:13,222 | INFO     | [payload] control thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:13,359 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:17,069 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:52:51] 2025-10-13 22:52:41,890 | INFO     | PID=3111562 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:52:51] 2025-10-13 22:52:41,890 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:52:51] 2025-10-13 22:52:41,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:52:51] 2025-10-13 22:52:41,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:52:51] 2025-10-13 22:52:45,260 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:52:51] 2025-10-13 22:52:45,924 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139981491304256)>', '<ExcThread(monitor, started 139980995274496)>']
[2025-10-14 00:52:51] 2025-10-13 22:52:46,917 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:52:51] 2025-10-13 22:52:46,918 | INFO     | [monitor] control thread has ended
[2025-10-14 00:52:51] 2025-10-13 22:52:50,950 | INFO     | all workflow threads have been joined
[2025-10-14 00:52:51] 2025-10-13 22:52:50,950 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:52:51] 2025-10-13 22:52:50,951 | INFO     | traces error code: 0
[2025-10-14 00:52:51] 2025-10-13 22:52:50,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:52:51] 2025-10-13 22:52:51,004 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:52:51] 2025-10-13 22:52:51,006 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:52:51] 2025-10-13 22:52:51,008 [wrapper] pilotpid: 3111562
[2025-10-14 00:52:51] 2025-10-13 22:52:51,010 [wrapper] Pilot exit status: 0
[2025-10-14 00:52:51] 2025-10-13 22:52:51,017 [wrapper] pandaids: 6826079513
[2025-10-14 00:52:51] 2025-10-13 22:52:51,034 [wrapper] cleanup supervisor_pilot 3133364 3111563
[2025-10-14 00:52:51] 2025-10-13 22:52:51,036 [wrapper] Test setup, not cleaning
[2025-10-14 00:52:51] 2025-10-13 22:52:51,039 [wrapper] apfmon messages muted
[2025-10-14 00:52:51] 2025-10-13 22:52:51,041 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:52:51] 2025-10-13 22:52:51,043 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:52:51]  *** Error codes and diagnostics ***
[2025-10-14 00:52:51]     "exeErrorCode": 0,
[2025-10-14 00:52:51]     "exeErrorDiag": "",
[2025-10-14 00:52:51]     "pilotErrorCode": 0,
[2025-10-14 00:52:51]     "pilotErrorDiag": "",
[2025-10-14 00:52:51]  *** Listing of results directory ***
[2025-10-14 00:52:51] total 419568
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc    552446 Sep 30 17:06 pilot3.tar.gz
[2025-10-14 00:52:51] -rwx------ 1 boinc boinc     36292 Sep 30 17:15 runpilot2-wrapper.sh
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      5112 Sep 30 17:15 queuedata.json
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc       100 Oct 13 23:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:52:51] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 23:06 run_atlas
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc       105 Oct 13 23:06 job.xml
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc 221493319 Oct 13 23:06 EVNT.46373045._002038.pool.root.1
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc    565595 Oct 13 23:06 input.tar.gz
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 23:06 start_atlas.sh
[2025-10-14 00:52:51] drwxrwx--x 2 boinc boinc      4096 Oct 13 23:06 shared
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc         0 Oct 13 23:06 boinc_setup_complete
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      6437 Oct 13 23:06 init_data.xml
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc         0 Oct 13 23:06 boinc_lockfile
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      2538 Oct 13 23:06 pandaJob.out
[2025-10-14 00:52:51] -rw------- 1 boinc boinc    972799 Oct 13 23:06 agis_schedconf.cvmfs.json
[2025-10-14 00:52:51] -rw------- 1 boinc boinc   1560580 Oct 13 23:06 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:52:51] drwx------ 4 boinc boinc      4096 Oct 13 23:06 pilot3
[2025-10-14 00:52:51] -rw------- 1 boinc boinc 201910416 Oct 14 00:51 HITS.46373048._063703.pool.root.1
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc       530 Oct 14 00:51 boinc_task_state.xml
[2025-10-14 00:52:51] -rw------- 1 boinc boinc      1020 Oct 14 00:51 memory_monitor_summary.json
[2025-10-14 00:52:51] -rw------- 1 boinc boinc    268569 Oct 14 00:51 log.46373048._063703.job.log.tgz.1
[2025-10-14 00:52:51] -rw------- 1 boinc boinc      7758 Oct 14 00:52 heartbeat.json
[2025-10-14 00:52:51] -rw------- 1 boinc boinc        95 Oct 14 00:52 pilot_heartbeat.json
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      8192 Oct 14 00:52 boinc_mmap_file
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc        27 Oct 14 00:52 wrapper_checkpoint.txt
[2025-10-14 00:52:51] -rw------- 1 boinc boinc      4752 Oct 14 00:52 pilotlog.txt
[2025-10-14 00:52:51] -rw------- 1 boinc boinc    913047 Oct 14 00:52 log.46373048._063703.job.log.1
[2025-10-14 00:52:51] -rw------- 1 boinc boinc       357 Oct 14 00:52 output.list
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc       620 Oct 14 00:52 runtime_log
[2025-10-14 00:52:51] -rw------- 1 boinc boinc   1198080 Oct 14 00:52 result.tar.gz
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      8777 Oct 14 00:52 runtime_log.err
[2025-10-14 00:52:51] -rw------- 1 boinc boinc       659 Oct 14 00:52 loJKDmPFrN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm3e8MDmnAqeam.diag
[2025-10-14 00:52:51] -rw-r--r-- 1 boinc boinc      6937 Oct 14 00:52 stderr.txt
[2025-10-14 00:52:51] HITS file was successfully produced:
[2025-10-14 00:52:51] -rw------- 1 boinc boinc 201910416 Oct 14 00:51 shared/HITS.pool.root.1
[2025-10-14 00:52:51]  *** Contents of shared directory: ***
[2025-10-14 00:52:51] total 415236
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc 221493319 Oct 13 23:06 ATLAS.root_0
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc    565595 Oct 13 23:06 input.tar.gz
[2025-10-14 00:52:51] -rw-r--r-- 2 boinc boinc     15120 Oct 13 23:06 start_atlas.sh
[2025-10-14 00:52:51] -rw------- 1 boinc boinc 201910416 Oct 14 00:51 HITS.pool.root.1
[2025-10-14 00:52:51] -rw------- 1 boinc boinc   1198080 Oct 14 00:52 result.tar.gz
00:52:52 (3107841): run_atlas exited; CPU time 18282.189448
00:52:52 (3107841): called boinc_finish(0)

</stderr_txt>
]]>

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