Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:15:15 (1125741): wrapper (7.7.26015): starting
16:15:15 (1125741): wrapper: running run_atlas (--nthreads 4)
[2025-10-14 16:15:15] Arguments: --nthreads 4
[2025-10-14 16:15:15] Threads: 4
[2025-10-14 16:15:15] Checking for CVMFS
[2025-10-14 16:15:15] No cvmfs_config command found, will try listing directly
[2025-10-14 16:15:15] CVMFS is ok
[2025-10-14 16:15:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-14 16:15:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-14 16:15:15] Further information can be found at the LHC@home message board.
[2025-10-14 16:15:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-14 16:15:15] Checking for apptainer binary...
[2025-10-14 16:15:15] which: no apptainer in ((null))
[2025-10-14 16:15:15] apptainer is not installed, using version from CVMFS
[2025-10-14 16:15:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-14 16:15:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-10-14 16:15:15] apptainer works
[2025-10-14 16:15:15] Set ATHENA_PROC_NUMBER=4
[2025-10-14 16:15:15] Set ATHENA_CORE_NUMBER=4
[2025-10-14 16:15:15] Starting ATLAS job with PandaID=6841124362
[2025-10-14 16:15:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 19:07:26]  *** The last 200 lines of the pilot log: ***
[2025-10-14 19:07:26] 2025-10-14 17:00:14,735 | INFO     | fitting pss+swap vs Time
[2025-10-14 19:07:26] 2025-10-14 17:00:14,735 | INFO     | sum of square deviations: 1318277740.5
[2025-10-14 19:07:26] 2025-10-14 17:00:14,736 | INFO     | sum of deviations: 5863883396.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,736 | INFO     | mean x: 1760456275.5
[2025-10-14 19:07:26] 2025-10-14 17:00:14,736 | INFO     | mean y: 2307986.24691358
[2025-10-14 19:07:26] 2025-10-14 17:00:14,736 | INFO     | -- intersect: -7828447253.064853
[2025-10-14 19:07:26] 2025-10-14 17:00:14,736 | INFO     | intersect: -7828447253.064853
[2025-10-14 19:07:26] 2025-10-14 17:00:14,737 | INFO     | chi2: 2.1027243405722302
[2025-10-14 19:07:26] 2025-10-14 17:00:14,737 | INFO     | sum of square deviations: 1199940638.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,738 | INFO     | sum of deviations: 15662568619.999998
[2025-10-14 19:07:26] 2025-10-14 17:00:14,738 | INFO     | mean x: 1760456123.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,738 | INFO     | mean y: 2320289.076433121
[2025-10-14 19:07:26] 2025-10-14 17:00:14,738 | INFO     | -- intersect: -22976537127.524086
[2025-10-14 19:07:26] 2025-10-14 17:00:14,738 | INFO     | intersect: -22976537127.524086
[2025-10-14 19:07:26] 2025-10-14 17:00:14,739 | INFO     | chi2: 1.313758311555314
[2025-10-14 19:07:26] 2025-10-14 17:00:14,739 | INFO     | current chi2=1.313758311555314 (change=37.52113454882103 %)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,739 | INFO     | sum of square deviations: 1088905998.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,740 | INFO     | sum of deviations: 15205382434.500002
[2025-10-14 19:07:26] 2025-10-14 17:00:14,740 | INFO     | mean x: 1760455970.5
[2025-10-14 19:07:26] 2025-10-14 17:00:14,740 | INFO     | mean y: 2319661.072368421
[2025-10-14 19:07:26] 2025-10-14 17:00:14,740 | INFO     | -- intersect: -24580524349.078224
[2025-10-14 19:07:26] 2025-10-14 17:00:14,740 | INFO     | intersect: -24580524349.078224
[2025-10-14 19:07:26] 2025-10-14 17:00:14,741 | INFO     | chi2: 1.314916413514225
[2025-10-14 19:07:26] 2025-10-14 17:00:14,741 | INFO     | current chi2=1.314916413514225 (change=-0.08815182737379194 %)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,741 | INFO     | right removable region: 151
[2025-10-14 19:07:26] 2025-10-14 17:00:14,741 | INFO     | sum of square deviations: 1199940638.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,742 | INFO     | sum of deviations: -13912934107.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,742 | INFO     | mean x: 1760456428.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,742 | INFO     | mean y: 2333055.7579617836
[2025-10-14 19:07:26] 2025-10-14 17:00:14,742 | INFO     | -- intersect: 20414271367.83352
[2025-10-14 19:07:26] 2025-10-14 17:00:14,742 | INFO     | intersect: 20414271367.83352
[2025-10-14 19:07:26] 2025-10-14 17:00:14,743 | INFO     | chi2: 0.825679874378151
[2025-10-14 19:07:26] 2025-10-14 17:00:14,743 | INFO     | current chi2=0.825679874378151 (change=60.73285221240876 %)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,743 | INFO     | sum of square deviations: 1088905998.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,744 | INFO     | sum of deviations: -14759425952.5
[2025-10-14 19:07:26] 2025-10-14 17:00:14,744 | INFO     | mean x: 1760456580.5
[2025-10-14 19:07:26] 2025-10-14 17:00:14,744 | INFO     | mean y: 2334183.9671052634
[2025-10-14 19:07:26] 2025-10-14 17:00:14,744 | INFO     | -- intersect: 23864199753.818714
[2025-10-14 19:07:26] 2025-10-14 17:00:14,744 | INFO     | intersect: 23864199753.818714
[2025-10-14 19:07:26] 2025-10-14 17:00:14,745 | INFO     | chi2: 0.8182695821916427
[2025-10-14 19:07:26] 2025-10-14 17:00:14,745 | INFO     | current chi2=0.8182695821916427 (change=0.8974776322469171 %)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,745 | INFO     | left removable region: 20
[2025-10-14 19:07:26] 2025-10-14 17:00:14,745 | INFO     | sum of square deviations: 697054930.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | sum of deviations: -4054891125.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | mean x: 1760456550.0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | mean y: 2347435.717557252
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | -- intersect: 10243232814.066605
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | intersect: 10243232814.066605
[2025-10-14 19:07:26] 2025-10-14 17:00:14,746 | INFO     | chi2: 0.004918255644961541
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | -- intersect: 10243232814.066605
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | current memory leak: -5.82 B/s (using 131 data points, chi2=0.00)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | could have reported an average CPU frequency of 2711 MHz (9 samples)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | ..............................
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | . Timing measurements:
[2025-10-14 19:07:26] 2025-10-14 17:00:14,747 | INFO     | . get job = 0 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . initial setup = 1 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . payload setup = 9 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . stage-in = 0 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . payload execution = 9840 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . stage-out = 0 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | . log creation = 0 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,748 | INFO     | ..............................
[2025-10-14 19:07:26] 2025-10-14 17:00:14,845 | INFO     | 
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | job summary report
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | --------------------------------------------------
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | PanDA job id: 6841124362
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | task id: 46676269
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | errors: (none)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 19:07:26] 2025-10-14 17:00:14,846 | INFO     | pilot state: finished 
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | transexitcode: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | exeerrorcode: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | exeerrordiag: 
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | exitcode: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | exitmsg: OK
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | cpuconsumptiontime: 37477 s
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | nevents: 400
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | neventsw: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | pid: 1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | pgrp: 1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | corecount: 4
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | event service: False
[2025-10-14 19:07:26] 2025-10-14 17:00:14,847 | INFO     | sizes: {0: 2348882, 7: 2349144, 11: 2349172, 9853: 2378224, 9855: 2387246, 9858: 2387302, 9866: 2387688}
[2025-10-14 19:07:26] 2025-10-14 17:00:14,848 | INFO     | --------------------------------------------------
[2025-10-14 19:07:26] 2025-10-14 17:00:14,848 | INFO     | 
[2025-10-14 19:07:26] 2025-10-14 17:00:14,848 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-10-14 19:07:26] 2025-10-14 17:00:14,881 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,881 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,881 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,881 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,882 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | job 6841124362 has completed (purged errors)
[2025-10-14 19:07:26] 2025-10-14 17:00:14,883 | INFO     | overall cleanup function is called
[2025-10-14 19:07:26] 2025-10-14 17:00:15,892 | INFO     | --- collectZombieJob: --- 10, [1189013]
[2025-10-14 19:07:26] 2025-10-14 17:00:15,892 | INFO     | zombie collector waiting for pid 1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:15,892 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 19:07:26] 2025-10-14 17:00:15,892 | INFO     | collected zombie processes
[2025-10-14 19:07:26] 2025-10-14 17:00:15,893 | INFO     | will attempt to kill all subprocesses of pid=1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:16,619 | INFO     | process IDs to be killed: [1189013] (in reverse order)
[2025-10-14 19:07:26] 2025-10-14 17:00:16,867 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 19:07:26] 2025-10-14 17:00:16,867 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 19:07:26] 2025-10-14 17:00:16,897 | INFO     | did not find any defunct processes belonging to 1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:16,927 | INFO     | did not find any defunct processes belonging to 1189013
[2025-10-14 19:07:26] 2025-10-14 17:00:16,927 | INFO     | ready for new job
[2025-10-14 19:07:26] 2025-10-14 17:00:16,927 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 19:07:26] 2025-10-14 17:00:16,929 | INFO     | ***************************************
[2025-10-14 19:07:26] 2025-10-14 17:00:16,930 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 19:07:26] 2025-10-14 17:00:16,930 | INFO     | ***************************************
[2025-10-14 19:07:26] 2025-10-14 17:00:16,930 | INFO     | 
[2025-10-14 19:07:26] 2025-10-14 17:00:16,938 | INFO     | architecture information:
[2025-10-14 19:07:26] 2025-10-14 17:00:16,939 | INFO     | executing command: cat /etc/os-release
[2025-10-14 19:07:26] 2025-10-14 17:00:16,964 | INFO     | cat /etc/os-release:
[2025-10-14 19:07:26] NAME="CentOS Linux"
[2025-10-14 19:07:26] VERSION="7 (Core)"
[2025-10-14 19:07:26] ID="centos"
[2025-10-14 19:07:26] ID_LIKE="rhel fedora"
[2025-10-14 19:07:26] VERSION_ID="7"
[2025-10-14 19:07:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 19:07:26] ANSI_COLOR="0;31"
[2025-10-14 19:07:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 19:07:26] HOME_URL="https://www.centos.org/"
[2025-10-14 19:07:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 19:07:26] 
[2025-10-14 19:07:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 19:07:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 19:07:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 19:07:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 19:07:26] 
[2025-10-14 19:07:26] 2025-10-14 17:00:16,965 | INFO     | ***************************************
[2025-10-14 19:07:26] 2025-10-14 17:00:17,468 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-10-14 19:07:26] 2025-10-14 17:00:17,495 | INFO     | sufficient remaining disk space (3330574123008 B)
[2025-10-14 19:07:26] 2025-10-14 17:00:17,495 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 19:07:26] 2025-10-14 17:00:17,495 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 19:07:26] 2025-10-14 17:00:17,496 | INFO     | update_server=False
[2025-10-14 19:07:26] 2025-10-14 17:00:17,496 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 19:07:26] 2025-10-14 17:00:17,496 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 19:07:26] 2025-10-14 17:00:17,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 19:07:26] 2025-10-14 17:00:17,497 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-14 19:07:26] 2025-10-14 17:00:17,498 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-14 19:07:26] 2025-10-14 17:00:17,498 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:07:26] 2025-10-14 17:00:17,498 | INFO     | will abort loop
[2025-10-14 19:07:26] 2025-10-14 17:00:18,245 | INFO     | all payload control threads have been joined
[2025-10-14 19:07:26] 2025-10-14 17:00:18,446 | INFO     | all job control threads have been joined
[2025-10-14 19:07:26] 2025-10-14 17:00:18,501 | INFO     | [job] retrieve thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:18,502 | INFO     | [job] job monitor thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:18,507 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:18,554 | INFO     | all data control threads have been joined
[2025-10-14 19:07:26] 2025-10-14 17:00:18,810 | INFO     | [payload] validate_post thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,191 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,215 | INFO     | [payload] failed_post thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,251 | INFO     | [payload] control thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,261 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,451 | INFO     | [job] control thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,500 | INFO     | [data] copytool_out thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,560 | INFO     | [data] control thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,636 | INFO     | [data] copytool_in thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,643 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,773 | INFO     | [job] validate thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:19,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 19:07:26] 2025-10-14 17:00:20,861 | INFO     | [job] queue monitor thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:21,503 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 19:07:26] 2025-10-14 17:00:27,816 [wrapper] supervise_pilot (15 min periods counter: 12)
[2025-10-14 19:07:26] 2025-10-14 17:00:45,678 | INFO     | [monitor] cgroup control has ended
[2025-10-14 19:07:26] 2025-10-14 17:00:45,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23050524747584)>', '<ExcThread(monitor, started 23049812305664)>']
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | INFO     | PID=1143065 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | INFO     | .. there are 9 such processes running
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 19:07:26] 2025-10-14 17:00:47,601 | INFO     | [monitor] control thread has ended
[2025-10-14 19:07:26] 2025-10-14 17:00:50,914 | INFO     | all workflow threads have been joined
[2025-10-14 19:07:26] 2025-10-14 17:00:50,914 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 19:07:26] 2025-10-14 17:00:50,915 | INFO     | traces error code: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:50,915 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 19:07:26] 2025-10-14 17:00:51,134 [wrapper] ==== pilot stdout END ====
[2025-10-14 19:07:26] 2025-10-14 17:00:51,138 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 19:07:26] 2025-10-14 17:00:51,141 [wrapper] pilotpid: 1143065
[2025-10-14 19:07:26] 2025-10-14 17:00:51,145 [wrapper] Pilot exit status: 0
[2025-10-14 19:07:26] 2025-10-14 17:00:51,160 [wrapper] pandaids: 6841124362
[2025-10-14 19:07:26] 2025-10-14 17:00:51,326 [wrapper] cleanup supervisor_pilot 1620591 1143066
[2025-10-14 19:07:26] 2025-10-14 17:00:51,330 [wrapper] Test setup, not cleaning
[2025-10-14 19:07:26] 2025-10-14 17:00:51,334 [wrapper] apfmon messages muted
[2025-10-14 19:07:26] 2025-10-14 17:00:51,338 [wrapper] ==== wrapper stdout END ====
[2025-10-14 19:07:26] 2025-10-14 17:00:51,342 [wrapper] ==== wrapper stderr END ====
[2025-10-14 19:07:26]  *** Error codes and diagnostics ***
[2025-10-14 19:07:26]     "exeErrorCode": 0,
[2025-10-14 19:07:26]     "exeErrorDiag": "",
[2025-10-14 19:07:26]     "pilotErrorCode": 0,
[2025-10-14 19:07:26]     "pilotErrorDiag": "",
[2025-10-14 19:07:26]  *** Listing of results directory ***
[2025-10-14 19:07:26] total 414728
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc    557409 Oct 13 03:18 pilot3.tar.gz
[2025-10-14 19:07:26] -rwx------ 1 boinc boinc     36292 Oct 13 03:42 runpilot2-wrapper.sh
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc      5112 Oct 13 03:42 queuedata.json
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc       100 Oct 14 16:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 19:07:26] -rwxr-xr-x 1 boinc boinc      7986 Oct 14 16:15 run_atlas
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc       105 Oct 14 16:15 job.xml
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc      6688 Oct 14 16:15 init_data.xml
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc 220784658 Oct 14 16:15 EVNT.46676267._004363.pool.root.1
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc     15120 Oct 14 16:15 start_atlas.sh
[2025-10-14 19:07:26] drwxrwx--x 2 boinc boinc      4096 Oct 14 16:15 shared
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc    569674 Oct 14 16:15 input.tar.gz
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc         0 Oct 14 16:15 boinc_lockfile
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc      2549 Oct 14 16:15 pandaJob.out
[2025-10-14 19:07:26] -rw------- 1 boinc boinc    973966 Oct 14 16:15 agis_schedconf.cvmfs.json
[2025-10-14 19:07:26] -rw------- 1 boinc boinc   1560740 Oct 14 16:15 agis_ddmendpoints.agis.ALL.json
[2025-10-14 19:07:26] drwx------ 5 boinc boinc      4096 Oct 14 16:15 pilot3
[2025-10-14 19:07:26] -rw------- 1 boinc boinc 196533787 Oct 14 18:59 HITS.46676269._094270.pool.root.1
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc       528 Oct 14 18:59 boinc_task_state.xml
[2025-10-14 19:07:26] -rw------- 1 boinc boinc        95 Oct 14 18:59 pilot_heartbeat.json
[2025-10-14 19:07:26] -rw------- 1 boinc boinc      1027 Oct 14 18:59 memory_monitor_summary.json
[2025-10-14 19:07:26] -rw------- 1 boinc boinc    338946 Oct 14 19:00 log.46676269._094270.job.log.tgz.1
[2025-10-14 19:07:26] -rw------- 1 boinc boinc      7784 Oct 14 19:00 heartbeat.json
[2025-10-14 19:07:26] -rw------- 1 boinc boinc      5021 Oct 14 19:00 pilotlog.txt
[2025-10-14 19:07:26] -rw------- 1 boinc boinc   1389949 Oct 14 19:00 log.46676269._094270.job.log.1
[2025-10-14 19:07:26] -rw------- 1 boinc boinc       357 Oct 14 19:00 output.list
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc       620 Oct 14 19:00 runtime_log
[2025-10-14 19:07:26] -rw------- 1 boinc boinc   1751040 Oct 14 19:00 result.tar.gz
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc      9084 Oct 14 19:00 runtime_log.err
[2025-10-14 19:07:26] -rw------- 1 boinc boinc       662 Oct 14 19:00 ALzMDmskMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmJTVMDm3lyFRm.diag
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc        26 Oct 14 19:07 wrapper_checkpoint.txt
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc      8192 Oct 14 19:07 boinc_mmap_file
[2025-10-14 19:07:26] -rw-r--r-- 1 boinc boinc     20686 Oct 14 19:07 stderr.txt
[2025-10-14 19:07:26] HITS file was successfully produced:
[2025-10-14 19:07:26] -rw------- 1 boinc boinc 196533787 Oct 14 18:59 shared/HITS.pool.root.1
[2025-10-14 19:07:26]  *** Contents of shared directory: ***
[2025-10-14 19:07:26] total 409836
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc 220784658 Oct 14 16:15 ATLAS.root_0
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc     15120 Oct 14 16:15 start_atlas.sh
[2025-10-14 19:07:26] -rw-r--r-- 2 boinc boinc    569674 Oct 14 16:15 input.tar.gz
[2025-10-14 19:07:26] -rw------- 1 boinc boinc 196533787 Oct 14 18:59 HITS.pool.root.1
[2025-10-14 19:07:26] -rw------- 1 boinc boinc   1751040 Oct 14 19:00 result.tar.gz
19:07:27 (1125741): run_atlas exited; CPU time 38100.730788
19:07:27 (1125741): called boinc_finish(0)

</stderr_txt>
]]>

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