Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:43:16 (2974849): wrapper (7.7.26015): starting
22:43:16 (2974849): wrapper: running run_atlas (--nthreads 6)
[2025-10-13 22:43:16] Arguments: --nthreads 6
[2025-10-13 22:43:16] Threads: 6
[2025-10-13 22:43:16] Checking for CVMFS
[2025-10-13 22:43:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 22:43:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 22:43:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 22:43:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 22:43:16] 2.11.5.0 3385007 5924 100080 151662 0 57 13695686 20971520 929 130560 0 11744134 99.996 200361 14 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.35.143:3126 1
[2025-10-13 22:43:16] CVMFS is ok
[2025-10-13 22:43:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 22:43:16] Checking for apptainer binary...
[2025-10-13 22:43:16] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 22:43:16] Running /usr/bin/apptainer --version
[2025-10-13 22:43:16] apptainer version 1.3.6-1.el9
[2025-10-13 22:43:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 22:43:17] testio006
[2025-10-13 22:43:17] apptainer works
[2025-10-13 22:43:17] Set ATHENA_PROC_NUMBER=6
[2025-10-13 22:43:17] Set ATHENA_CORE_NUMBER=6
[2025-10-13 22:43:17] Starting ATLAS job with PandaID=6841069230
[2025-10-13 22:43:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-14 00:00:39]  *** The last 200 lines of the pilot log: ***
[2025-10-14 00:00:39] 2025-10-13 14:59:37,247 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:38,085 | INFO     | time since job start (4571s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:39,176 | INFO     | PID=2978640 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:00:39] 2025-10-13 14:59:39,176 | INFO     | .. there are 2 such processes running
[2025-10-14 00:00:39] 2025-10-13 14:59:39,750 | INFO     | monitor loop #356: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:39,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:40,177 | INFO     | time since job start (4573s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:42,182 | INFO     | time since job start (4575s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:42,253 | INFO     | monitor loop #357: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:42,253 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:44,187 | INFO     | time since job start (4577s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:44,756 | INFO     | monitor loop #358: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:44,757 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:46,192 | INFO     | time since job start (4579s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:47,259 | INFO     | monitor loop #359: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:47,260 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:48,197 | INFO     | time since job start (4581s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:49,763 | INFO     | monitor loop #360: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:49,763 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:50,203 | INFO     | time since job start (4583s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:52,208 | INFO     | time since job start (4585s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:52,266 | INFO     | monitor loop #361: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:52,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:54,213 | INFO     | time since job start (4587s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:54,769 | INFO     | monitor loop #362: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:54,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:56,219 | INFO     | time since job start (4589s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:57,271 | INFO     | monitor loop #363: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:57,271 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 14:59:58,224 | INFO     | time since job start (4591s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 14:59:59,774 | INFO     | monitor loop #364: job 0:6841069230 is in state 'finished'
[2025-10-14 00:00:39] 2025-10-13 14:59:59,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-14 00:00:39] 2025-10-13 15:00:00,230 | INFO     | time since job start (4593s) is within the limit (172800.0s)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,285 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-14 00:00:39] 2025-10-13 15:00:01,289 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 4040.9227499999993
[2025-10-14 00:00:39] 2025-10-13 15:00:01,292 | INFO     | using path: /var/lib/boinc/slots/1/PanDA_Pilot-6841069230/memory_monitor_summary.json (trf name=prmon)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,293 | INFO     | extracted standard info from prmon json
[2025-10-14 00:00:39] 2025-10-13 15:00:01,293 | INFO     | extracted standard memory fields from prmon json
[2025-10-14 00:00:39] 2025-10-13 15:00:01,293 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-14 00:00:39] 2025-10-13 15:00:01,293 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-14 00:00:39] 2025-10-13 15:00:01,293 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-14 00:00:39] 2025-10-13 15:00:01,295 | INFO     | fitting pss+swap vs Time
[2025-10-14 00:00:39] 2025-10-13 15:00:01,295 | INFO     | sum of square deviations: 93240818.0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,295 | INFO     | sum of deviations: -3258122056.9999995
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | mean x: 1760365347.0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | mean y: 2488233.6119402987
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | -- intersect: 61515088492.429474
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | intersect: 61515088492.429474
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | chi2: 0.042420630119405604
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | -- intersect: 61515088492.429474
[2025-10-14 00:00:39] 2025-10-13 15:00:01,296 | INFO     | current memory leak: -34.94 B/s (using 67 data points, chi2=0.04)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | could have reported an average CPU frequency of 3989 MHz (6 samples)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | ..............................
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . Timing measurements:
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . get job = 0 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . initial setup = 5 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . payload setup = 3 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . stage-in = 0 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,297 | INFO     | . payload execution = 4489 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,298 | INFO     | . stage-out = 0 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,298 | INFO     | . log creation = 0 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,298 | INFO     | ..............................
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | 
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | job summary report
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | --------------------------------------------------
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | PanDA job id: 6841069230
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | task id: 46676269
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | errors: (none)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-14 00:00:39] 2025-10-13 15:00:01,366 | INFO     | pilot state: finished 
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | transexitcode: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | exeerrorcode: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | exeerrordiag: 
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | exitcode: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | exitmsg: OK
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | cpuconsumptiontime: 24713 s
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | nevents: 400
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | neventsw: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | pid: 2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | pgrp: 2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:01,367 | INFO     | corecount: 6
[2025-10-14 00:00:39] 2025-10-13 15:00:01,368 | INFO     | event service: False
[2025-10-14 00:00:39] 2025-10-13 15:00:01,368 | INFO     | sizes: {0: 2348857, 3: 2349119, 10: 2349147, 4497: 2375316, 4498: 2384314, 4500: 2384370, 4580: 2384692}
[2025-10-14 00:00:39] 2025-10-13 15:00:01,368 | INFO     | --------------------------------------------------
[2025-10-14 00:00:39] 2025-10-13 15:00:01,368 | INFO     | 
[2025-10-14 00:00:39] 2025-10-13 15:00:01,368 | INFO     | executing command: ls -lF /var/lib/boinc/slots/1
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,384 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | job 6841069230 has completed (purged errors)
[2025-10-14 00:00:39] 2025-10-13 15:00:01,385 | INFO     | overall cleanup function is called
[2025-10-14 00:00:39] 2025-10-13 15:00:01,413 | INFO     | PID=2978640 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:00:39] 2025-10-13 15:00:01,413 | INFO     | .. there are 2 such processes running
[2025-10-14 00:00:39] 2025-10-13 15:00:02,392 | INFO     | --- collectZombieJob: --- 10, [2985377]
[2025-10-14 00:00:39] 2025-10-13 15:00:02,392 | INFO     | zombie collector waiting for pid 2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:02,393 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-14 00:00:39] 2025-10-13 15:00:02,393 | INFO     | collected zombie processes
[2025-10-14 00:00:39] 2025-10-13 15:00:02,393 | INFO     | will attempt to kill all subprocesses of pid=2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:02,458 | INFO     | process IDs to be killed: [2985377] (in reverse order)
[2025-10-14 00:00:39] 2025-10-13 15:00:02,495 | WARNING  | found no corresponding commands to process id(s)
[2025-10-14 00:00:39] 2025-10-13 15:00:02,495 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-14 00:00:39] 2025-10-13 15:00:02,497 | INFO     | did not find any defunct processes belonging to 2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:02,500 | INFO     | did not find any defunct processes belonging to 2985377
[2025-10-14 00:00:39] 2025-10-13 15:00:02,500 | INFO     | ready for new job
[2025-10-14 00:00:39] 2025-10-13 15:00:02,500 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-14 00:00:39] 2025-10-13 15:00:02,501 | INFO     | ***************************************
[2025-10-14 00:00:39] 2025-10-13 15:00:02,501 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-14 00:00:39] 2025-10-13 15:00:02,501 | INFO     | ***************************************
[2025-10-14 00:00:39] 2025-10-13 15:00:02,501 | INFO     | 
[2025-10-14 00:00:39] 2025-10-13 15:00:02,501 | INFO     | architecture information:
[2025-10-14 00:00:39] 2025-10-13 15:00:02,502 | INFO     | executing command: cat /etc/os-release
[2025-10-14 00:00:39] 2025-10-13 15:00:02,511 | INFO     | cat /etc/os-release:
[2025-10-14 00:00:39] NAME="CentOS Linux"
[2025-10-14 00:00:39] VERSION="7 (Core)"
[2025-10-14 00:00:39] ID="centos"
[2025-10-14 00:00:39] ID_LIKE="rhel fedora"
[2025-10-14 00:00:39] VERSION_ID="7"
[2025-10-14 00:00:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-14 00:00:39] ANSI_COLOR="0;31"
[2025-10-14 00:00:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-14 00:00:39] HOME_URL="https://www.centos.org/"
[2025-10-14 00:00:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-14 00:00:39] 
[2025-10-14 00:00:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-14 00:00:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-14 00:00:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-14 00:00:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-14 00:00:39] 
[2025-10-14 00:00:39] 2025-10-13 15:00:02,511 | INFO     | ***************************************
[2025-10-14 00:00:39] 2025-10-13 15:00:03,014 | INFO     | executing command: df -mP /var/lib/boinc/slots/1
[2025-10-14 00:00:39] 2025-10-13 15:00:03,025 | INFO     | sufficient remaining disk space (84924170240 B)
[2025-10-14 00:00:39] 2025-10-13 15:00:03,025 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-14 00:00:39] 2025-10-13 15:00:03,025 | INFO     | current server update state: UPDATING_FINAL
[2025-10-14 00:00:39] 2025-10-13 15:00:03,025 | INFO     | update_server=False
[2025-10-14 00:00:39] 2025-10-13 15:00:03,025 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-14 00:00:39] 2025-10-13 15:00:03,026 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:00:39] 2025-10-13 15:00:03,079 | INFO     | all data control threads have been joined
[2025-10-14 00:00:39] 2025-10-13 15:00:03,086 | INFO     | all job control threads have been joined
[2025-10-14 00:00:39] 2025-10-13 15:00:03,282 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-14 00:00:39] 2025-10-13 15:00:03,282 | INFO     | aborting loop
[2025-10-14 00:00:39] 2025-10-13 15:00:03,439 | INFO     | all payload control threads have been joined
[2025-10-14 00:00:39] 2025-10-13 15:00:04,031 | INFO     | [job] retrieve thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,031 | INFO     | [job] queue monitor thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-14 00:00:39] 2025-10-13 15:00:04,085 | INFO     | [data] control thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,091 | INFO     | [job] control thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,288 | INFO     | [job] job monitor thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,303 | INFO     | [payload] validate_post thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,444 | INFO     | [payload] control thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,470 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-14 00:00:39] 2025-10-13 15:00:04,693 | INFO     | [job] validate thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,743 | INFO     | [payload] execute_payloads thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,828 | INFO     | [job] create_data_payload thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,833 | INFO     | [payload] validate_pre thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:04,933 | INFO     | [data] copytool_in thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:05,401 | INFO     | [payload] failed_post thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:06,475 | INFO     | [data] copytool_out thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:08,056 | INFO     | [data] queue_monitor thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:13,216 | INFO     | job.realtimelogging is not enabled
[2025-10-14 00:00:39] 2025-10-13 15:00:14,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-14 00:00:39] 2025-10-13 15:00:33,564 | INFO     | PID=2978640 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-14 00:00:39] 2025-10-13 15:00:33,564 | INFO     | .. there are 2 such processes running
[2025-10-14 00:00:39] 2025-10-13 15:00:33,564 | INFO     | found 0 job(s) in 20 queues
[2025-10-14 00:00:39] 2025-10-13 15:00:33,564 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-14 00:00:39] 2025-10-13 15:00:33,564 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-14 00:00:39] 2025-10-13 15:00:33,733 | INFO     | [monitor] cgroup control has ended
[2025-10-14 00:00:39] 2025-10-13 15:00:34,505 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711709501248)>', '<ExcThread(monitor, started 139710915667712)>']
[2025-10-14 00:00:39] 2025-10-13 15:00:34,570 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-14 00:00:39] 2025-10-13 15:00:34,570 | INFO     | [monitor] control thread has ended
[2025-10-14 00:00:39] 2025-10-13 15:00:39,530 | INFO     | all workflow threads have been joined
[2025-10-14 00:00:39] 2025-10-13 15:00:39,531 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-14 00:00:39] 2025-10-13 15:00:39,531 | INFO     | traces error code: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:39,531 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-14 00:00:39] 2025-10-13 15:00:39,604 [wrapper] ==== pilot stdout END ====
[2025-10-14 00:00:39] 2025-10-13 15:00:39,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-14 00:00:39] 2025-10-13 15:00:39,608 [wrapper] pilotpid: 2978640
[2025-10-14 00:00:39] 2025-10-13 15:00:39,610 [wrapper] Pilot exit status: 0
[2025-10-14 00:00:39] 2025-10-13 15:00:39,617 [wrapper] pandaids: 6841069230
[2025-10-14 00:00:39] 2025-10-13 15:00:39,642 [wrapper] cleanup supervisor_pilot 3021061 2978641
[2025-10-14 00:00:39] 2025-10-13 15:00:39,644 [wrapper] Test setup, not cleaning
[2025-10-14 00:00:39] 2025-10-13 15:00:39,646 [wrapper] apfmon messages muted
[2025-10-14 00:00:39] 2025-10-13 15:00:39,648 [wrapper] ==== wrapper stdout END ====
[2025-10-14 00:00:39] 2025-10-13 15:00:39,649 [wrapper] ==== wrapper stderr END ====
[2025-10-14 00:00:39]  *** Error codes and diagnostics ***
[2025-10-14 00:00:39]     "exeErrorCode": 0,
[2025-10-14 00:00:39]     "exeErrorDiag": "",
[2025-10-14 00:00:39]     "pilotErrorCode": 0,
[2025-10-14 00:00:39]     "pilotErrorDiag": "",
[2025-10-14 00:00:39]  *** Listing of results directory ***
[2025-10-14 00:00:39] total 406120
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc    557409 Oct 13 09:11 pilot3.tar.gz
[2025-10-14 00:00:39] -rwx------. 1 boinc boinc     36292 Oct 13 09:43 runpilot2-wrapper.sh
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc      5112 Oct 13 09:43 queuedata.json
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc       100 Oct 13 22:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-14 00:00:39] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 22:43 run_atlas
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc       105 Oct 13 22:43 job.xml
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc 219903792 Oct 13 22:43 EVNT.46676267._004701.pool.root.1
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:43 start_atlas.sh
[2025-10-14 00:00:39] drwxrwx--x. 2 boinc boinc        68 Oct 13 22:43 shared
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:43 input.tar.gz
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc      9465 Oct 13 22:43 init_data.xml
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc         0 Oct 13 22:43 boinc_lockfile
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc      2550 Oct 13 22:43 pandaJob.out
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc    972489 Oct 13 22:43 agis_schedconf.cvmfs.json
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc   1560580 Oct 13 22:43 agis_ddmendpoints.agis.ALL.json
[2025-10-14 00:00:39] drwx------. 5 boinc boinc      4096 Oct 13 22:43 pilot3
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc 190132045 Oct 13 23:58 HITS.46676269._093362.pool.root.1
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc       529 Oct 13 23:58 boinc_task_state.xml
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc      1016 Oct 13 23:58 memory_monitor_summary.json
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc    289955 Oct 13 23:58 log.46676269._093362.job.log.tgz.1
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc        95 Oct 13 23:59 pilot_heartbeat.json
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc      7751 Oct 14 00:00 heartbeat.json
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc      8192 Oct 14 00:00 boinc_mmap_file
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc        27 Oct 14 00:00 wrapper_checkpoint.txt
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc      4895 Oct 14 00:00 pilotlog.txt
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc    679299 Oct 14 00:00 log.46676269._093362.job.log.1
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc       357 Oct 14 00:00 output.list
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc       620 Oct 14 00:00 runtime_log
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc    993280 Oct 14 00:00 result.tar.gz
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc      8661 Oct 14 00:00 runtime_log.err
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc       642 Oct 14 00:00 7ALMDmUqLS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmLEmNDmQx20On.diag
[2025-10-14 00:00:39] -rw-r--r--. 1 boinc boinc     22027 Oct 14 00:00 stderr.txt
[2025-10-14 00:00:39] HITS file was successfully produced:
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc 190132045 Oct 13 23:58 shared/HITS.pool.root.1
[2025-10-14 00:00:39]  *** Contents of shared directory: ***
[2025-10-14 00:00:39] total 401976
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc 219903792 Oct 13 22:43 ATLAS.root_0
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc     15120 Oct 13 22:43 start_atlas.sh
[2025-10-14 00:00:39] -rw-r--r--. 2 boinc boinc    569677 Oct 13 22:43 input.tar.gz
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc 190132045 Oct 13 23:58 HITS.pool.root.1
[2025-10-14 00:00:39] -rw-------. 1 boinc boinc    993280 Oct 14 00:00 result.tar.gz
00:00:40 (2974849): run_atlas exited; CPU time 24753.281903
00:00:40 (2974849): called boinc_finish(0)

</stderr_txt>
]]>

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