Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:28:47 (30496): wrapper (7.7.26015): starting
02:28:47 (30496): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:28:47] Arguments: --nthreads 8
[2025-10-13 02:28:47] Threads: 8
[2025-10-13 02:28:47] Checking for CVMFS
[2025-10-13 02:28:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:28:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:28:47] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:28:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:28:47] 2.11.2.0 4697 53945 120800 151650 2 59 13589472 18432000 1833 130560 0 50195877 99.976 2431063 39568 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:28:47] CVMFS is ok
[2025-10-13 02:28:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:28:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:28:47] Further information can be found at the LHC@home message board.
[2025-10-13 02:28:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:28:47] Checking for apptainer binary...
[2025-10-13 02:28:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:28:47] Running /usr/bin/apptainer --version
[2025-10-13 02:28:47] apptainer version 1.3.2-1.el7
[2025-10-13 02:28:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:28:48] c-206-21.aglt2.org
[2025-10-13 02:28:48] apptainer works
[2025-10-13 02:28:48] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:28:48] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:28:48] Starting ATLAS job with PandaID=6841124338
[2025-10-13 02:28:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
05:20:04 (30496): BOINC client no longer exists - exiting
05:20:04 (30496): timer handler: client dead, exiting
05:29:54 (22630): wrapper (7.7.26015): starting
05:29:54 (22630): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 05:29:54] Arguments: --nthreads 8
[2025-10-13 05:29:54] Threads: 8
[2025-10-13 05:29:54] This job has been restarted, cleaning up previous attempt
[2025-10-13 05:29:54] Checking for CVMFS
[2025-10-13 05:29:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 05:29:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 05:29:55] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 05:29:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 05:29:55] 2.11.2.0 4697 54126 119068 151656 1 11 13608320 18432001 1 130560 0 50468497 99.976 2438765 39554 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 05:29:55] CVMFS is ok
[2025-10-13 05:29:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 05:29:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 05:29:55] Further information can be found at the LHC@home message board.
[2025-10-13 05:29:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 05:29:55] Checking for apptainer binary...
[2025-10-13 05:29:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 05:29:55] Running /usr/bin/apptainer --version
[2025-10-13 05:29:55] apptainer version 1.3.2-1.el7
[2025-10-13 05:29:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 05:29:56] c-206-21.aglt2.org
[2025-10-13 05:29:56] apptainer works
[2025-10-13 05:29:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 05:29:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 05:29:56] Starting ATLAS job with PandaID=6841124338
[2025-10-13 05:29:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 08:33:32]  *** The last 200 lines of the pilot log: ***
[2025-10-13 08:33:32] 2025-10-13 12:32:26,550 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 08:33:32] 2025-10-13 12:32:26,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 08:33:32] 2025-10-13 12:32:26,550 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 08:33:32] 2025-10-13 12:32:26,551 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 08:33:32] 2025-10-13 12:32:26,554 | INFO     | fitting pss+swap vs Time
[2025-10-13 08:33:32] 2025-10-13 12:32:26,555 | INFO     | sum of square deviations: 1778377530.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,555 | INFO     | sum of deviations: 21735809566.999996
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | mean x: 1760353264.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | mean y: 2472685.2122905026
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | -- intersect: -21513039443.95348
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | intersect: -21513039443.95348
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | chi2: 1.3416215643745084
[2025-10-13 08:33:32] 2025-10-13 12:32:26,556 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 08:33:32] 2025-10-13 12:32:26,557 | INFO     | sum of deviations: 20863769548.999996
[2025-10-13 08:33:32] 2025-10-13 12:32:26,557 | INFO     | mean x: 1760353111.5
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | mean y: 2471770.1839080458
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | -- intersect: -22481899362.024155
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | intersect: -22481899362.024155
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | chi2: 1.342560003128843
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | current chi2=1.342560003128843 (change=-0.06994809708295384 %)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,558 | INFO     | right removable region: 173
[2025-10-13 08:33:32] 2025-10-13 12:32:26,559 | INFO     | sum of square deviations: 1633472487.5
[2025-10-13 08:33:32] 2025-10-13 12:32:26,559 | INFO     | sum of deviations: -3891620599.000001
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | mean x: 1760353416.5
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | mean y: 2499332.942528736
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | -- intersect: 4196403833.6887817
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | intersect: 4196403833.6887817
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | chi2: 0.046383337357329545
[2025-10-13 08:33:32] 2025-10-13 12:32:26,560 | INFO     | current chi2=0.046383337357329545 (change=96.54274062157354 %)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,561 | INFO     | sum of square deviations: 1496660620.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,561 | INFO     | sum of deviations: -6910218653.000002
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | mean x: 1760353569.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | mean y: 2502637.177514793
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | -- intersect: 8130215697.723549
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | intersect: 8130215697.723549
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | chi2: 0.016601306919072373
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | current chi2=0.016601306919072373 (change=64.20846824544199 %)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,562 | INFO     | sum of square deviations: 1367709365.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,563 | INFO     | sum of deviations: -5900897952.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,563 | INFO     | mean x: 1760353721.5
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | mean y: 2501436.7439024393
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | -- intersect: 7597439320.345312
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | intersect: 7597439320.345312
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | chi2: 0.016242051296354403
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | current chi2=0.016242051296354403 (change=2.164020124856798 %)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | left removable region: 30
[2025-10-13 08:33:32] 2025-10-13 12:32:26,564 | INFO     | sum of square deviations: 906703512.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,565 | INFO     | sum of deviations: -1107283772.9999995
[2025-10-13 08:33:32] 2025-10-13 12:32:26,565 | INFO     | mean x: 1760353996.0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,565 | INFO     | mean y: 2494341.5804195805
[2025-10-13 08:33:32] 2025-10-13 12:32:26,565 | INFO     | -- intersect: 2152272509.0951233
[2025-10-13 08:33:32] 2025-10-13 12:32:26,566 | INFO     | intersect: 2152272509.0951233
[2025-10-13 08:33:32] 2025-10-13 12:32:26,566 | INFO     | chi2: 0.008251552874403323
[2025-10-13 08:33:32] 2025-10-13 12:32:26,566 | INFO     | -- intersect: 2152272509.0951233
[2025-10-13 08:33:32] 2025-10-13 12:32:26,566 | INFO     | current memory leak: -1.22 B/s (using 143 data points, chi2=0.01)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,566 | INFO     | could have reported an average CPU frequency of 2238 MHz (9 samples)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | ..............................
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . Timing measurements:
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . get job = 0 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . initial setup = 2 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . payload setup = 5 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . stage-in = 0 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . payload execution = 10903 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . stage-out = 2 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | . log creation = 0 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,567 | INFO     | ..............................
[2025-10-13 08:33:32] 2025-10-13 12:32:26,651 | INFO     | 
[2025-10-13 08:33:32] 2025-10-13 12:32:26,651 | INFO     | job summary report
[2025-10-13 08:33:32] 2025-10-13 12:32:26,651 | INFO     | --------------------------------------------------
[2025-10-13 08:33:32] 2025-10-13 12:32:26,651 | INFO     | PanDA job id: 6841124338
[2025-10-13 08:33:32] 2025-10-13 12:32:26,651 | INFO     | task id: 46676269
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | errors: (none)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | pilot state: finished 
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | transexitcode: 0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | exeerrorcode: 0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | exeerrordiag: 
[2025-10-13 08:33:32] 2025-10-13 12:32:26,652 | INFO     | exitcode: 0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | exitmsg: OK
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | cpuconsumptiontime: 81821 s
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | nevents: 400
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | neventsw: 0
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | pid: 24313
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | pgrp: 24313
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | corecount: 8
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | event service: False
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | sizes: {0: 2348806, 4: 2349068, 11: 2349096, 10913: 2378222, 10915: 2387220, 10916: 2387276, 10922: 2387662}
[2025-10-13 08:33:32] 2025-10-13 12:32:26,653 | INFO     | --------------------------------------------------
[2025-10-13 08:33:32] 2025-10-13 12:32:26,654 | INFO     | 
[2025-10-13 08:33:32] 2025-10-13 12:32:26,654 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 08:33:32] 2025-10-13 12:32:26,677 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,678 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,679 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,680 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,681 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 08:33:32] 2025-10-13 12:32:26,681 | INFO     | job 6841124338 has completed (purged errors)
[2025-10-13 08:33:32] 2025-10-13 12:32:26,681 | INFO     | overall cleanup function is called
[2025-10-13 08:33:32] 2025-10-13 12:32:27,689 | INFO     | --- collectZombieJob: --- 10, [24313]
[2025-10-13 08:33:32] 2025-10-13 12:32:27,689 | INFO     | zombie collector waiting for pid 24313
[2025-10-13 08:33:32] 2025-10-13 12:32:27,690 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 08:33:32] 2025-10-13 12:32:27,690 | INFO     | collected zombie processes
[2025-10-13 08:33:32] 2025-10-13 12:32:27,690 | INFO     | will attempt to kill all subprocesses of pid=24313
[2025-10-13 08:33:32] 2025-10-13 12:32:27,792 | INFO     | process IDs to be killed: [24313] (in reverse order)
[2025-10-13 08:33:32] 2025-10-13 12:32:27,847 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 08:33:32] 2025-10-13 12:32:27,848 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 08:33:32] 2025-10-13 12:32:27,852 | INFO     | did not find any defunct processes belonging to 24313
[2025-10-13 08:33:32] 2025-10-13 12:32:27,855 | INFO     | did not find any defunct processes belonging to 24313
[2025-10-13 08:33:32] 2025-10-13 12:32:27,855 | INFO     | ready for new job
[2025-10-13 08:33:32] 2025-10-13 12:32:27,855 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 08:33:32] 2025-10-13 12:32:27,857 | INFO     | ***************************************
[2025-10-13 08:33:32] 2025-10-13 12:32:27,857 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 08:33:32] 2025-10-13 12:32:27,857 | INFO     | ***************************************
[2025-10-13 08:33:32] 2025-10-13 12:32:27,857 | INFO     | 
[2025-10-13 08:33:32] 2025-10-13 12:32:27,858 | INFO     | architecture information:
[2025-10-13 08:33:32] 2025-10-13 12:32:27,858 | INFO     | executing command: cat /etc/os-release
[2025-10-13 08:33:32] 2025-10-13 12:32:27,873 | INFO     | cat /etc/os-release:
[2025-10-13 08:33:32] NAME="CentOS Linux"
[2025-10-13 08:33:32] VERSION="7 (Core)"
[2025-10-13 08:33:32] ID="centos"
[2025-10-13 08:33:32] ID_LIKE="rhel fedora"
[2025-10-13 08:33:32] VERSION_ID="7"
[2025-10-13 08:33:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 08:33:32] ANSI_COLOR="0;31"
[2025-10-13 08:33:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 08:33:32] HOME_URL="https://www.centos.org/"
[2025-10-13 08:33:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 08:33:32] 
[2025-10-13 08:33:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 08:33:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 08:33:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 08:33:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 08:33:32] 
[2025-10-13 08:33:32] 2025-10-13 12:32:27,874 | INFO     | ***************************************
[2025-10-13 08:33:32] 2025-10-13 12:32:28,377 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 08:33:32] 2025-10-13 12:32:28,393 | INFO     | sufficient remaining disk space (28474081280 B)
[2025-10-13 08:33:32] 2025-10-13 12:32:28,394 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 08:33:32] 2025-10-13 12:32:28,394 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 08:33:32] 2025-10-13 12:32:28,394 | INFO     | update_server=False
[2025-10-13 08:33:32] 2025-10-13 12:32:28,394 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 08:33:32] 2025-10-13 12:32:28,394 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:33:32] 2025-10-13 12:32:28,395 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 08:33:32] 2025-10-13 12:32:28,395 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 08:33:32] 2025-10-13 12:32:28,395 | INFO     | aborting loop
[2025-10-13 08:33:32] 2025-10-13 12:32:28,740 | INFO     | all data control threads have been joined
[2025-10-13 08:33:32] 2025-10-13 12:32:29,018 | INFO     | all job control threads have been joined
[2025-10-13 08:33:32] 2025-10-13 12:32:29,400 | INFO     | [job] retrieve thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,401 | INFO     | [job] queue monitor thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,401 | INFO     | [job] job monitor thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,446 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,589 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,619 | INFO     | all payload control threads have been joined
[2025-10-13 08:33:32] 2025-10-13 12:32:29,746 | INFO     | [data] control thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:29,901 | INFO     | [payload] validate_post thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,023 | INFO     | [job] control thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,109 | INFO     | [data] copytool_in thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,114 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,195 | INFO     | [job] validate thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,401 | INFO     | [data] copytool_out thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,423 | INFO     | [payload] failed_post thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,608 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:30,625 | INFO     | [payload] control thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:31,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 08:33:32] 2025-10-13 12:32:35,106 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 08:33:32] 2025-10-13 12:32:58,904 | INFO     | PID=2500 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 08:33:32] 2025-10-13 12:32:58,904 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 08:33:32] 2025-10-13 12:32:58,904 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 08:33:32] 2025-10-13 12:32:58,904 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 08:33:32] 2025-10-13 12:33:26,850 | INFO     | [monitor] cgroup control has ended
[2025-10-13 08:33:32] 2025-10-13 12:33:27,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140674094737216)>', '<ExcThread(monitor, started 140673491642112)>']
[2025-10-13 08:33:32] 2025-10-13 12:33:28,039 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 08:33:32] 2025-10-13 12:33:28,039 | INFO     | [monitor] control thread has ended
[2025-10-13 08:33:32] 2025-10-13 12:33:32,070 | INFO     | all workflow threads have been joined
[2025-10-13 08:33:32] 2025-10-13 12:33:32,070 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 08:33:32] 2025-10-13 12:33:32,070 | INFO     | traces error code: 0
[2025-10-13 08:33:32] 2025-10-13 12:33:32,070 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 08:33:32] 2025-10-13 12:33:32,161 [wrapper] ==== pilot stdout END ====
[2025-10-13 08:33:32] 2025-10-13 12:33:32,165 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 08:33:32] 2025-10-13 12:33:32,169 [wrapper] pilotpid: 2500
[2025-10-13 08:33:32] 2025-10-13 12:33:32,173 [wrapper] Pilot exit status: 0
[2025-10-13 08:33:32] 2025-10-13 12:33:32,186 [wrapper] pandaids: 6841124338 6841124338
[2025-10-13 08:33:32] 2025-10-13 12:33:32,231 [wrapper] cleanup supervisor_pilot 26081 2501
[2025-10-13 08:33:32] 2025-10-13 12:33:32,235 [wrapper] Test setup, not cleaning
[2025-10-13 08:33:32] 2025-10-13 12:33:32,238 [wrapper] apfmon messages muted
[2025-10-13 08:33:32] 2025-10-13 12:33:32,242 [wrapper] ==== wrapper stdout END ====
[2025-10-13 08:33:32] 2025-10-13 12:33:32,246 [wrapper] ==== wrapper stderr END ====
[2025-10-13 08:33:32]  *** Error codes and diagnostics ***
[2025-10-13 08:33:32]     "exeErrorCode": 0,
[2025-10-13 08:33:32]     "exeErrorDiag": "",
[2025-10-13 08:33:32]     "pilotErrorCode": 0,
[2025-10-13 08:33:32]     "pilotErrorDiag": "",
[2025-10-13 08:33:32]  *** Listing of results directory ***
[2025-10-13 08:33:32] total 624008
[2025-10-13 08:33:32] drwx------ 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 08:33:32] -rwx------ 1 boincer umatlas     36292 Oct 12 21:41 runpilot2-wrapper.sh
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:41 queuedata.json
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 08:33:32] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:28 run_atlas
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:28 job.xml
[2025-10-13 08:33:32] -rw-r--r-- 3 boincer umatlas 221634882 Oct 13 02:28 EVNT.46676267._004362.pool.root.1
[2025-10-13 08:33:32] -rw-r--r-- 3 boincer umatlas 221634882 Oct 13 02:28 ATLAS.root_0
[2025-10-13 08:33:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 08:33:32] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:28 shared
[2025-10-13 08:33:32] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:28 input.tar.gz
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:28 boinc_lockfile
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas      2549 Oct 13 05:29 pandaJob.out
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas    972849 Oct 13 05:30 agis_schedconf.cvmfs.json
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 08:30 init_data.xml
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas 187930884 Oct 13 08:31 HITS.46676269._094246.pool.root.1
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas       532 Oct 13 08:31 boinc_task_state.xml
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas      1051 Oct 13 08:32 memory_monitor_summary.json
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas        96 Oct 13 08:32 pilot_heartbeat.json
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas   1560580 Oct 13 08:32 agis_ddmendpoints.agis.ALL.json
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas    413820 Oct 13 08:32 log.46676269._094246.job.log.tgz.1
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas      7854 Oct 13 08:32 heartbeat.json
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas        29 Oct 13 08:32 wrapper_checkpoint.txt
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 08:32 boinc_mmap_file
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas      4745 Oct 13 08:33 pilotlog.txt
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas   1527005 Oct 13 08:33 log.46676269._094246.job.log.1
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas       357 Oct 13 08:33 output.list
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas       620 Oct 13 08:33 runtime_log
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas   1955840 Oct 13 08:33 result.tar.gz
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas      8789 Oct 13 08:33 runtime_log.err
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas       786 Oct 13 08:33 MjPKDmujMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsOmNDmIV9qIo.diag
[2025-10-13 08:33:32] -rw-r--r-- 1 boincer umatlas     23154 Oct 13 08:33 stderr.txt
[2025-10-13 08:33:32] HITS file was successfully produced:
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas 187930884 Oct 13 08:31 shared/HITS.pool.root.1
[2025-10-13 08:33:32]  *** Contents of shared directory: ***
[2025-10-13 08:33:32] total 402464
[2025-10-13 08:33:32] -rw-r--r-- 3 boincer umatlas 221634882 Oct 13 02:28 ATLAS.root_0
[2025-10-13 08:33:32] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:28 start_atlas.sh
[2025-10-13 08:33:32] -rw-r--r-- 2 boincer umatlas    569677 Oct 13 02:28 input.tar.gz
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas 187930884 Oct 13 08:31 HITS.pool.root.1
[2025-10-13 08:33:32] -rw------- 1 boincer umatlas   1955840 Oct 13 08:33 result.tar.gz
08:33:33 (22630): run_atlas exited; CPU time 81955.404172
08:33:33 (22630): called boinc_finish(0)

</stderr_txt>
]]>

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