Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:33:56 (2974859): wrapper (7.7.26015): starting
03:33:56 (2974859): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 03:33:56] Arguments: --nthreads 8
[2025-10-13 03:33:56] Threads: 8
[2025-10-13 03:33:56] Checking for CVMFS
[2025-10-13 03:33:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:33:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:33:56] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:33:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:33:56] 2.13.2.0 5242 6800 136300 151653 1 441 39186809 40960001 20211 16776704 0 24165079 99.746 14326614 32311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 03:33:56] CVMFS is ok
[2025-10-13 03:33:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:33:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:33:56] Further information can be found at the LHC@home message board.
[2025-10-13 03:33:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:33:56] Checking for apptainer binary...
[2025-10-13 03:33:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:33:56] Running /usr/bin/apptainer --version
[2025-10-13 03:33:56] apptainer version 1.4.3-1.el9
[2025-10-13 03:33:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:33:56] c-212-1.aglt2.org
[2025-10-13 03:33:56] apptainer works
[2025-10-13 03:33:56] Set ATHENA_PROC_NUMBER=8
[2025-10-13 03:33:56] Set ATHENA_CORE_NUMBER=8
[2025-10-13 03:33:56] Starting ATLAS job with PandaID=6841070291
[2025-10-13 03:33:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:54:22]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:54:22] 2025-10-13 08:53:31,964 | INFO     | PID=2978956 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-10-13 04:54:22] 2025-10-13 08:53:31,965 | INFO     | .. there are 25 such processes running
[2025-10-13 04:54:22] 2025-10-13 08:53:32,052 | WARNING  | process 2986531 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 04:54:22] 2025-10-13 08:53:32,053 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6841070291/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,054 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6841070291/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,054 | WARNING  | memory limits not set in config, using defaults: 'NoneType' object has no attribute 'get'
[2025-10-13 04:54:22] 2025-10-13 08:53:32,054 | WARNING  | maxPSS not found in memory monitor output
[2025-10-13 04:54:22] 2025-10-13 08:53:32,055 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 3617595 B
[2025-10-13 04:54:22] 2025-10-13 08:53:32,055 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15301 B
[2025-10-13 04:54:22] 2025-10-13 08:53:32,055 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 04:54:22] 2025-10-13 08:53:32,077 | INFO     | sufficient remaining disk space (125705388032 B)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,078 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,078 | INFO     | size of work directory /tmp/boinchome/slots/3/PanDA_Pilot-6841070291: 3916559 B (within 2537553920 B limit)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,079 | INFO     | pfn file=/tmp/boinchome/slots/3/PanDA_Pilot-6841070291/HITS.46676269._094096.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,079 | INFO     | total size of present files: 0 B (workdir size: 3916559 B)
[2025-10-13 04:54:22] 2025-10-13 08:53:32,079 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/3/PanDA_Pilot-6841070291/HITS.46676269._094096.pool.root.1 since it does not exist
[2025-10-13 04:54:22] 2025-10-13 08:53:32,478 | INFO     | number of running child processes to parent process 2986531: 1
[2025-10-13 04:54:22] 2025-10-13 08:53:32,478 | INFO     | maximum number of monitored processes: 6
[2025-10-13 04:54:22] 2025-10-13 08:53:32,965 | INFO     | time since job start (4764s) is within the limit (172800.0s)
[2025-10-13 04:54:22] 2025-10-13 08:53:33,944 | INFO     | job 6841070291 has state=finished
[2025-10-13 04:54:22] 2025-10-13 08:53:33,944 | INFO     | preparing for final server update for job 6841070291 in state='finished'
[2025-10-13 04:54:22] 2025-10-13 08:53:34,013 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-13 04:54:22] 2025-10-13 08:53:34,013 | INFO     | this job has now completed (state=finished)
[2025-10-13 04:54:22] 2025-10-13 08:53:34,013 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 04:54:22] 2025-10-13 08:53:34,013 | INFO     | log transfer has been attempted: DONE
[2025-10-13 04:54:22] 2025-10-13 08:53:34,013 | INFO     | job 6841070291 has finished - writing final server update
[2025-10-13 04:54:22] 2025-10-13 08:53:34,014 | INFO     | total number of processed events: 400 (read)
[2025-10-13 04:54:22] 2025-10-13 08:53:34,014 | INFO     | executing command: lscpu
[2025-10-13 04:54:22] 2025-10-13 08:53:34,076 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 04:54:22] 2025-10-13 08:53:34,968 | INFO     | time since job start (4766s) is within the limit (172800.0s)
[2025-10-13 04:54:22] 2025-10-13 08:53:34,981 | INFO     | monitor loop #334: job 0:6841070291 is in state 'finished'
[2025-10-13 04:54:22] 2025-10-13 08:53:34,982 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:54:22] 2025-10-13 08:53:36,973 | INFO     | time since job start (4768s) is within the limit (172800.0s)
[2025-10-13 04:54:22] 2025-10-13 08:53:37,484 | INFO     | monitor loop #335: job 0:6841070291 is in state 'finished'
[2025-10-13 04:54:22] 2025-10-13 08:53:37,485 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,409 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-13 04:54:22] 2025-10-13 08:53:38,414 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3062.191000000001
[2025-10-13 04:54:22] 2025-10-13 08:53:38,430 | INFO     | using path: /tmp/boinchome/slots/3/PanDA_Pilot-6841070291/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,430 | INFO     | extracted standard info from prmon json
[2025-10-13 04:54:22] 2025-10-13 08:53:38,430 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 04:54:22] 2025-10-13 08:53:38,431 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 04:54:22] 2025-10-13 08:53:38,431 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 04:54:22] 2025-10-13 08:53:38,431 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | sum of square deviations: 110960220.0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | sum of deviations: -4534289942.000001
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | mean x: 1760343316.0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | mean y: 2570422.267605634
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | -- intersect: 71937422319.69292
[2025-10-13 04:54:22] 2025-10-13 08:53:38,433 | INFO     | intersect: 71937422319.69292
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | chi2: 0.007709583261393064
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | -- intersect: 71937422319.69292
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | current memory leak: -40.86 B/s (using 71 data points, chi2=0.01)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | could have reported an average CPU frequency of 3016 MHz (6 samples)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | ..............................
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | . Timing measurements:
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | . get job = 0 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,434 | INFO     | . initial setup = 2 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | . payload setup = 6 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | . stage-in = 0 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | . payload execution = 4734 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | . stage-out = 0 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | . log creation = 0 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,435 | INFO     | ..............................
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | 
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | job summary report
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | --------------------------------------------------
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | PanDA job id: 6841070291
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | task id: 46676269
[2025-10-13 04:54:22] 2025-10-13 08:53:38,508 | INFO     | errors: (none)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | pilot state: finished 
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | transexitcode: 0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | exeerrorcode: 0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | exeerrordiag: 
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | exitcode: 0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | exitmsg: OK
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | cpuconsumptiontime: 32664 s
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | nevents: 400
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | neventsw: 0
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | pid: 2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | pgrp: 2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | corecount: 8
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | event service: False
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | sizes: {0: 2348029, 1: 2348885, 6: 2349147, 12: 2349175, 4744: 2384484, 4747: 2384484, 4754: 2384834}
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | --------------------------------------------------
[2025-10-13 04:54:22] 2025-10-13 08:53:38,509 | INFO     | 
[2025-10-13 04:54:22] 2025-10-13 08:53:38,510 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 04:54:22] 2025-10-13 08:53:38,533 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,533 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,533 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,533 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,533 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,534 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,535 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,535 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,535 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:54:22] 2025-10-13 08:53:38,535 | INFO     | job 6841070291 has completed (purged errors)
[2025-10-13 04:54:22] 2025-10-13 08:53:38,535 | INFO     | overall cleanup function is called
[2025-10-13 04:54:22] 2025-10-13 08:53:39,539 | INFO     | --- collectZombieJob: --- 10, [2986531]
[2025-10-13 04:54:22] 2025-10-13 08:53:39,539 | INFO     | zombie collector waiting for pid 2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:39,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:54:22] 2025-10-13 08:53:39,540 | INFO     | collected zombie processes
[2025-10-13 04:54:22] 2025-10-13 08:53:39,540 | INFO     | will attempt to kill all subprocesses of pid=2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:39,790 | INFO     | process IDs to be killed: [2986531] (in reverse order)
[2025-10-13 04:54:22] 2025-10-13 08:53:39,879 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:54:22] 2025-10-13 08:53:39,879 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:54:22] 2025-10-13 08:53:39,889 | INFO     | did not find any defunct processes belonging to 2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:39,898 | INFO     | did not find any defunct processes belonging to 2986531
[2025-10-13 04:54:22] 2025-10-13 08:53:39,898 | INFO     | ready for new job
[2025-10-13 04:54:22] 2025-10-13 08:53:39,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:54:22] 2025-10-13 08:53:39,899 | INFO     | ***************************************
[2025-10-13 04:54:22] 2025-10-13 08:53:39,899 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:54:22] 2025-10-13 08:53:39,899 | INFO     | ***************************************
[2025-10-13 04:54:22] 2025-10-13 08:53:39,899 | INFO     | 
[2025-10-13 04:54:22] 2025-10-13 08:53:39,902 | INFO     | architecture information:
[2025-10-13 04:54:22] 2025-10-13 08:53:39,903 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:54:22] 2025-10-13 08:53:39,918 | INFO     | cat /etc/os-release:
[2025-10-13 04:54:22] NAME="CentOS Linux"
[2025-10-13 04:54:22] VERSION="7 (Core)"
[2025-10-13 04:54:22] ID="centos"
[2025-10-13 04:54:22] ID_LIKE="rhel fedora"
[2025-10-13 04:54:22] VERSION_ID="7"
[2025-10-13 04:54:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:54:22] ANSI_COLOR="0;31"
[2025-10-13 04:54:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:54:22] HOME_URL="https://www.centos.org/"
[2025-10-13 04:54:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:54:22] 
[2025-10-13 04:54:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:54:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:54:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:54:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:54:22] 
[2025-10-13 04:54:22] 2025-10-13 08:53:39,919 | INFO     | ***************************************
[2025-10-13 04:54:22] 2025-10-13 08:53:40,422 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 04:54:22] 2025-10-13 08:53:40,441 | INFO     | sufficient remaining disk space (125709582336 B)
[2025-10-13 04:54:22] 2025-10-13 08:53:40,441 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:54:22] 2025-10-13 08:53:40,441 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:54:22] 2025-10-13 08:53:40,441 | INFO     | update_server=False
[2025-10-13 04:54:22] 2025-10-13 08:53:40,441 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:54:22] 2025-10-13 08:53:40,442 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:54:22] 2025-10-13 08:53:40,995 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:54:22] 2025-10-13 08:53:40,996 | INFO     | aborting loop
[2025-10-13 04:54:22] 2025-10-13 08:53:41,443 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:41,444 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:41,522 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:54:22] 2025-10-13 08:53:41,524 | INFO     | all data control threads have been joined
[2025-10-13 04:54:22] 2025-10-13 08:53:41,635 | INFO     | all payload control threads have been joined
[2025-10-13 04:54:22] 2025-10-13 08:53:41,668 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:41,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:41,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:54:22] 2025-10-13 08:53:41,920 | INFO     | [job] validate thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:41,962 | INFO     | all job control threads have been joined
[2025-10-13 04:54:22] 2025-10-13 08:53:42,000 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,195 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,288 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,530 | INFO     | [data] control thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,572 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,635 | INFO     | [payload] control thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,696 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,906 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:42,967 | INFO     | [job] control thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:43,528 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:53:45,776 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:54:22] 2025-10-13 08:54:09,069 | INFO     | 4773s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 04:54:22] 2025-10-13 08:54:10,519 | INFO     | PID=2978956 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 04:54:22] 2025-10-13 08:54:10,519 | INFO     | .. there are 25 such processes running
[2025-10-13 04:54:22] 2025-10-13 08:54:10,522 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:54:22] 2025-10-13 08:54:10,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:54:22] 2025-10-13 08:54:10,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:54:22] 2025-10-13 08:54:16,027 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:54:22] 2025-10-13 08:54:17,320 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140681240610624)>', '<ExcThread(monitor, started 140680756184832)>']
[2025-10-13 04:54:22] 2025-10-13 08:54:17,556 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:54:22] 2025-10-13 08:54:17,557 | INFO     | [monitor] control thread has ended
[2025-10-13 04:54:22] 2025-10-13 08:54:22,346 | INFO     | all workflow threads have been joined
[2025-10-13 04:54:22] 2025-10-13 08:54:22,346 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:54:22] 2025-10-13 08:54:22,347 | INFO     | traces error code: 0
[2025-10-13 04:54:22] 2025-10-13 08:54:22,347 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:54:22] 2025-10-13 08:54:22,453 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:54:22] 2025-10-13 08:54:22,459 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:54:22] 2025-10-13 08:54:22,462 [wrapper] pilotpid: 2978956
[2025-10-13 04:54:22] 2025-10-13 08:54:22,465 [wrapper] Pilot exit status: 0
[2025-10-13 04:54:22] 2025-10-13 08:54:22,478 [wrapper] pandaids: 6841070291
[2025-10-13 04:54:22] 2025-10-13 08:54:22,577 [wrapper] cleanup supervisor_pilot 3179950 2978957
[2025-10-13 04:54:22] 2025-10-13 08:54:22,581 [wrapper] Test setup, not cleaning
[2025-10-13 04:54:22] 2025-10-13 08:54:22,584 [wrapper] apfmon messages muted
[2025-10-13 04:54:22] 2025-10-13 08:54:22,587 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:54:22] 2025-10-13 08:54:22,591 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:54:22]  *** Error codes and diagnostics ***
[2025-10-13 04:54:22]     "exeErrorCode": 0,
[2025-10-13 04:54:22]     "exeErrorDiag": "",
[2025-10-13 04:54:22]     "pilotErrorCode": 0,
[2025-10-13 04:54:22]     "pilotErrorDiag": "",
[2025-10-13 04:54:22]  *** Listing of results directory ***
[2025-10-13 04:54:22] total 411416
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 04:54:22] -rwx------. 1 boincer umatlas     36292 Oct 12 21:23 runpilot2-wrapper.sh
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:23 queuedata.json
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:54:22] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:33 run_atlas
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:33 job.xml
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas 222989454 Oct 13 03:33 EVNT.46676267._004355.pool.root.1
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:33 start_atlas.sh
[2025-10-13 04:54:22] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:33 shared
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 03:33 input.tar.gz
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:33 boinc_lockfile
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:33 pandaJob.out
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas    972849 Oct 13 03:34 agis_schedconf.cvmfs.json
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:34 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:54:22] drwx------. 5 boincer umatlas      4096 Oct 13 03:34 pilot3
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas      6945 Oct 13 04:45 init_data.xml
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas 192353952 Oct 13 04:52 HITS.46676269._094096.pool.root.1
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas       529 Oct 13 04:53 boinc_task_state.xml
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas      1047 Oct 13 04:53 memory_monitor_summary.json
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas    337757 Oct 13 04:53 log.46676269._094096.job.log.tgz.1
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas      7775 Oct 13 04:53 heartbeat.json
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas        95 Oct 13 04:54 pilot_heartbeat.json
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 04:54 boinc_mmap_file
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas        27 Oct 13 04:54 wrapper_checkpoint.txt
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas      4940 Oct 13 04:54 pilotlog.txt
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas    687198 Oct 13 04:54 log.46676269._094096.job.log.1
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas       357 Oct 13 04:54 output.list
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas       620 Oct 13 04:54 runtime_log
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas   1044480 Oct 13 04:54 result.tar.gz
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas      8698 Oct 13 04:54 runtime_log.err
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas       651 Oct 13 04:54 KZgNDmoSMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSSVMDmMCRNYn.diag
[2025-10-13 04:54:22] -rw-r--r--. 1 boincer umatlas     22522 Oct 13 04:54 stderr.txt
[2025-10-13 04:54:22] HITS file was successfully produced:
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas 192353952 Oct 13 04:52 shared/HITS.pool.root.1
[2025-10-13 04:54:22]  *** Contents of shared directory: ***
[2025-10-13 04:54:22] total 407212
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas 222989454 Oct 13 03:33 ATLAS.root_0
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:33 start_atlas.sh
[2025-10-13 04:54:22] -rw-r--r--. 2 boincer umatlas    569679 Oct 13 03:33 input.tar.gz
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas 192353952 Oct 13 04:52 HITS.pool.root.1
[2025-10-13 04:54:22] -rw-------. 1 boincer umatlas   1044480 Oct 13 04:54 result.tar.gz
04:54:23 (2974859): run_atlas exited; CPU time 32768.782728
04:54:23 (2974859): called boinc_finish(0)

</stderr_txt>
]]>

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