Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:26:32 (15640): wrapper (7.7.26015): starting
02:26:32 (15640): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 02:26:32] Arguments: --nthreads 12
[2025-10-13 02:26:32] Threads: 12
[2025-10-13 02:26:32] Checking for CVMFS
[2025-10-13 02:26:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:26:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:26:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:26:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:26:32] 2.11.2.0 30551 53901 89500 151650 2 57 15161799 20275201 1 130560 0 31585330 99.959 2430927 39880 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:26:32] CVMFS is ok
[2025-10-13 02:26:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:26:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:26:32] Further information can be found at the LHC@home message board.
[2025-10-13 02:26:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:26:32] Checking for apptainer binary...
[2025-10-13 02:26:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:26:32] Running /usr/bin/apptainer --version
[2025-10-13 02:26:32] apptainer version 1.3.2-1.el7
[2025-10-13 02:26:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:26:34] c-205-16.aglt2.org
[2025-10-13 02:26:34] apptainer works
[2025-10-13 02:26:34] Set ATHENA_PROC_NUMBER=12
[2025-10-13 02:26:34] Set ATHENA_CORE_NUMBER=12
[2025-10-13 02:26:34] Starting ATLAS job with PandaID=6840851830
[2025-10-13 02:26:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:43:02]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:43:02]  status_code=0
[2025-10-13 03:43:02]  storage_token=
[2025-10-13 03:43:02]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6840851830/log.46676269._091009.job.log.tgz.1
[2025-10-13 03:43:02]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/05/log.46676269._091009.job.log.tgz.1
[2025-10-13 03:43:02]  workdir=None
[2025-10-13 03:43:02] ]
[2025-10-13 03:43:02] 2025-10-13 07:42:10,731 | INFO     | transferring file log.46676269._091009.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6840851830/log.46676269._091009.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 03:43:02] 2025-10-13 07:42:10,732 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6840851830/log.46676269._091009.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._091009.job
[2025-10-13 03:43:02] 2025-10-13 07:42:10,754 | INFO     | adding to output.list: log.46676269._091009.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/7c/05/log.46676269._091009.job.log.tg
[2025-10-13 03:43:02] 2025-10-13 07:42:10,755 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:43:02] 2025-10-13 07:42:10,755 | INFO     | summary of transferred files:
[2025-10-13 03:43:02] 2025-10-13 07:42:10,755 | INFO     |  -- lfn=log.46676269._091009.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:43:02] 2025-10-13 07:42:10,756 | INFO     | stage-out finished correctly
[2025-10-13 03:43:02] 2025-10-13 07:42:10,842 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:43:02] 2025-10-13 07:42:11,002 | WARNING  | process 25712 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 03:43:02] 2025-10-13 07:42:11,002 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840851830/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:43:02] 2025-10-13 07:42:11,090 | INFO     | number of running child processes to parent process 25712: 1
[2025-10-13 03:43:02] 2025-10-13 07:42:11,090 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:43:02] 2025-10-13 07:42:11,134 | INFO     | time since job start (4522s) is within the limit (172800.0s)
[2025-10-13 03:43:02] 2025-10-13 07:42:12,062 | INFO     | job 6840851830 has state=finished
[2025-10-13 03:43:02] 2025-10-13 07:42:12,062 | INFO     | preparing for final server update for job 6840851830 in state='finished'
[2025-10-13 03:43:02] 2025-10-13 07:42:12,063 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:43:02] 2025-10-13 07:42:12,063 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:43:02] 2025-10-13 07:42:12,063 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:43:02] 2025-10-13 07:42:12,063 | INFO     | job 6840851830 has finished - writing final server update
[2025-10-13 03:43:02] 2025-10-13 07:42:12,064 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:43:02] 2025-10-13 07:42:12,064 | INFO     | executing command: lscpu
[2025-10-13 03:43:02] 2025-10-13 07:42:12,091 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:43:02] 2025-10-13 07:42:13,138 | INFO     | time since job start (4524s) is within the limit (172800.0s)
[2025-10-13 03:43:02] 2025-10-13 07:42:13,594 | INFO     | monitor loop #336: job 0:6840851830 is in state 'finished'
[2025-10-13 03:43:02] 2025-10-13 07:42:13,594 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:43:02] 2025-10-13 07:42:15,143 | INFO     | time since job start (4526s) is within the limit (172800.0s)
[2025-10-13 03:43:02] 2025-10-13 07:42:16,106 | INFO     | monitor loop #337: job 0:6840851830 is in state 'finished'
[2025-10-13 03:43:02] 2025-10-13 07:42:16,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:43:02] 2025-10-13 07:42:17,145 | INFO     | time since job start (4528s) is within the limit (172800.0s)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,018 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 03:43:02] 2025-10-13 07:42:18,022 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-13 03:43:02] 2025-10-13 07:42:18,024 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6840851830/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,025 | INFO     | extracted standard info from prmon json
[2025-10-13 03:43:02] 2025-10-13 07:42:18,025 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:43:02] 2025-10-13 07:42:18,025 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:43:02] 2025-10-13 07:42:18,025 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:43:02] 2025-10-13 07:42:18,025 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:43:02] 2025-10-13 07:42:18,027 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:43:02] 2025-10-13 07:42:18,028 | INFO     | sum of square deviations: 93240818.0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,028 | INFO     | sum of deviations: -1170568283.9999998
[2025-10-13 03:43:02] 2025-10-13 07:42:18,028 | INFO     | mean x: 1760339156.0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,028 | INFO     | mean y: 2681040.4925373136
[2025-10-13 03:43:02] 2025-10-13 07:42:18,029 | INFO     | -- intersect: 22102414068.32728
[2025-10-13 03:43:02] 2025-10-13 07:42:18,029 | INFO     | intersect: 22102414068.32728
[2025-10-13 03:43:02] 2025-10-13 07:42:18,029 | INFO     | chi2: 0.032468577956695895
[2025-10-13 03:43:02] 2025-10-13 07:42:18,029 | INFO     | -- intersect: 22102414068.32728
[2025-10-13 03:43:02] 2025-10-13 07:42:18,029 | INFO     | current memory leak: -12.55 B/s (using 67 data points, chi2=0.03)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | could have reported an average CPU frequency of 2037 MHz (6 samples)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | ..............................
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | . Timing measurements:
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | . get job = 0 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | . initial setup = 2 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,030 | INFO     | . payload setup = 7 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,031 | INFO     | . stage-in = 0 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,031 | INFO     | . payload execution = 4496 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,031 | INFO     | . stage-out = 0 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,031 | INFO     | . log creation = 0 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,031 | INFO     | ..............................
[2025-10-13 03:43:02] 2025-10-13 07:42:18,267 | INFO     | PID=19305 has CPU usage=7.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,561 | INFO     | 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,562 | INFO     | job summary report
[2025-10-13 03:43:02] 2025-10-13 07:42:18,562 | INFO     | --------------------------------------------------
[2025-10-13 03:43:02] 2025-10-13 07:42:18,562 | INFO     | PanDA job id: 6840851830
[2025-10-13 03:43:02] 2025-10-13 07:42:18,562 | INFO     | task id: 46676269
[2025-10-13 03:43:02] 2025-10-13 07:42:18,562 | INFO     | errors: (none)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | pilot state: finished 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | transexitcode: 0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | exeerrorcode: 0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | exeerrordiag: 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | exitcode: 0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,563 | INFO     | exitmsg: OK
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | cpuconsumptiontime: 48811 s
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | nevents: 400
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | neventsw: 0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | pid: 25712
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | pgrp: 25712
[2025-10-13 03:43:02] 2025-10-13 07:42:18,564 | INFO     | corecount: 12
[2025-10-13 03:43:02] 2025-10-13 07:42:18,565 | INFO     | event service: False
[2025-10-13 03:43:02] 2025-10-13 07:42:18,565 | INFO     | sizes: {0: 2348857, 5: 2349119, 11: 2349175, 4503: 2375281, 4504: 2375280, 4505: 2384518, 4512: 2384656}
[2025-10-13 03:43:02] 2025-10-13 07:42:18,565 | INFO     | --------------------------------------------------
[2025-10-13 03:43:02] 2025-10-13 07:42:18,565 | INFO     | 
[2025-10-13 03:43:02] 2025-10-13 07:42:18,565 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:43:02] 2025-10-13 07:42:18,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,591 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:43:02] 2025-10-13 07:42:18,594 | INFO     | job 6840851830 has completed (purged errors)
[2025-10-13 03:43:02] 2025-10-13 07:42:18,594 | INFO     | overall cleanup function is called
[2025-10-13 03:43:02] 2025-10-13 07:42:19,610 | INFO     | --- collectZombieJob: --- 10, [25712]
[2025-10-13 03:43:02] 2025-10-13 07:42:19,610 | INFO     | zombie collector waiting for pid 25712
[2025-10-13 03:43:02] 2025-10-13 07:42:19,610 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:43:02] 2025-10-13 07:42:19,611 | INFO     | collected zombie processes
[2025-10-13 03:43:02] 2025-10-13 07:42:19,611 | INFO     | will attempt to kill all subprocesses of pid=25712
[2025-10-13 03:43:02] 2025-10-13 07:42:19,701 | INFO     | process IDs to be killed: [25712] (in reverse order)
[2025-10-13 03:43:02] 2025-10-13 07:42:19,754 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:43:02] 2025-10-13 07:42:19,754 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:43:02] 2025-10-13 07:42:19,758 | INFO     | did not find any defunct processes belonging to 25712
[2025-10-13 03:43:02] 2025-10-13 07:42:19,762 | INFO     | did not find any defunct processes belonging to 25712
[2025-10-13 03:43:02] 2025-10-13 07:42:19,762 | INFO     | ready for new job
[2025-10-13 03:43:02] 2025-10-13 07:42:19,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:43:02] 2025-10-13 07:42:19,763 | INFO     | ***************************************
[2025-10-13 03:43:02] 2025-10-13 07:42:19,764 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:43:02] 2025-10-13 07:42:19,764 | INFO     | ***************************************
[2025-10-13 03:43:02] 2025-10-13 07:42:19,764 | INFO     | 
[2025-10-13 03:43:02] 2025-10-13 07:42:19,764 | INFO     | architecture information:
[2025-10-13 03:43:02] 2025-10-13 07:42:19,765 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:43:02] 2025-10-13 07:42:19,779 | INFO     | cat /etc/os-release:
[2025-10-13 03:43:02] NAME="CentOS Linux"
[2025-10-13 03:43:02] VERSION="7 (Core)"
[2025-10-13 03:43:02] ID="centos"
[2025-10-13 03:43:02] ID_LIKE="rhel fedora"
[2025-10-13 03:43:02] VERSION_ID="7"
[2025-10-13 03:43:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:43:02] ANSI_COLOR="0;31"
[2025-10-13 03:43:02] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:43:02] HOME_URL="https://www.centos.org/"
[2025-10-13 03:43:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:43:02] 
[2025-10-13 03:43:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:43:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:43:02] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:43:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:43:02] 
[2025-10-13 03:43:02] 2025-10-13 07:42:19,779 | INFO     | ***************************************
[2025-10-13 03:43:02] 2025-10-13 07:42:20,282 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:43:02] 2025-10-13 07:42:20,298 | INFO     | sufficient remaining disk space (29494345728 B)
[2025-10-13 03:43:02] 2025-10-13 07:42:20,298 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:43:02] 2025-10-13 07:42:20,299 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:43:02] 2025-10-13 07:42:20,299 | INFO     | update_server=False
[2025-10-13 03:43:02] 2025-10-13 07:42:20,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:43:02] 2025-10-13 07:42:20,299 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:43:02] 2025-10-13 07:42:20,300 | INFO     | aborting loop
[2025-10-13 03:43:02] 2025-10-13 07:42:21,014 | INFO     | all data control threads have been joined
[2025-10-13 03:43:02] 2025-10-13 07:42:21,305 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:21,305 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:21,328 | INFO     | all job control threads have been joined
[2025-10-13 03:43:02] 2025-10-13 07:42:21,352 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:21,356 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:43:02] 2025-10-13 07:42:21,436 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:43:02] 2025-10-13 07:42:21,652 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:21,713 | INFO     | all payload control threads have been joined
[2025-10-13 03:43:02] 2025-10-13 07:42:21,932 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,020 | INFO     | [data] control thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,136 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,233 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,333 | INFO     | [job] control thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,551 | INFO     | [job] validate thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,718 | INFO     | [payload] control thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:22,762 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:23,125 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:43:02] 2025-10-13 07:42:23,363 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:24,130 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:25,442 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:30,712 | INFO     | job.realtimelogging is not enabled
[2025-10-13 03:43:02] 2025-10-13 07:42:31,718 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:43:02] 2025-10-13 07:42:50,468 | INFO     | PID=19305 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 03:43:02] 2025-10-13 07:42:50,470 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:43:02] 2025-10-13 07:42:50,470 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:43:02] 2025-10-13 07:42:50,470 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:43:02] 2025-10-13 07:42:56,211 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:43:02] 2025-10-13 07:42:56,873 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140030208706368)>', '<ExcThread(monitor, started 140028952966912)>']
[2025-10-13 03:43:02] 2025-10-13 07:42:57,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:43:02] 2025-10-13 07:42:57,503 | INFO     | [monitor] control thread has ended
[2025-10-13 03:43:02] 2025-10-13 07:43:01,885 | INFO     | all workflow threads have been joined
[2025-10-13 03:43:02] 2025-10-13 07:43:01,885 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:43:02] 2025-10-13 07:43:01,886 | INFO     | traces error code: 0
[2025-10-13 03:43:02] 2025-10-13 07:43:01,886 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:43:02] 2025-10-13 07:43:01,990 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:43:02] 2025-10-13 07:43:01,994 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:43:02] 2025-10-13 07:43:01,998 [wrapper] pilotpid: 19305
[2025-10-13 03:43:02] 2025-10-13 07:43:02,002 [wrapper] Pilot exit status: 0
[2025-10-13 03:43:02] 2025-10-13 07:43:02,019 [wrapper] pandaids: 6840851830
[2025-10-13 03:43:02] 2025-10-13 07:43:02,061 [wrapper] cleanup supervisor_pilot 23561 19306
[2025-10-13 03:43:02] 2025-10-13 07:43:02,065 [wrapper] Test setup, not cleaning
[2025-10-13 03:43:02] 2025-10-13 07:43:02,069 [wrapper] apfmon messages muted
[2025-10-13 03:43:02] 2025-10-13 07:43:02,073 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:43:02] 2025-10-13 07:43:02,077 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:43:02]  *** Error codes and diagnostics ***
[2025-10-13 03:43:02]     "exeErrorCode": 0,
[2025-10-13 03:43:02]     "exeErrorDiag": "",
[2025-10-13 03:43:02]     "pilotErrorCode": 0,
[2025-10-13 03:43:02]     "pilotErrorDiag": "",
[2025-10-13 03:43:02]  *** Listing of results directory ***
[2025-10-13 03:43:02] total 416828
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 03:43:02] -rwx------ 1 boincer umatlas     36292 Oct 12 18:24 runpilot2-wrapper.sh
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:24 queuedata.json
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:43:02] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:26 run_atlas
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:26 job.xml
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas 221097592 Oct 13 02:26 EVNT.46676267._004612.pool.root.1
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:26 start_atlas.sh
[2025-10-13 03:43:02] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:26 shared
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 02:26 input.tar.gz
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:26 boinc_lockfile
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:26 pandaJob.out
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas    973230 Oct 13 02:26 agis_schedconf.cvmfs.json
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas   1560580 Oct 13 02:26 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:43:02] drwx------ 5 boincer umatlas      4096 Oct 13 02:26 pilot3
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 03:36 init_data.xml
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas 199769982 Oct 13 03:41 HITS.46676269._091009.pool.root.1
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas       530 Oct 13 03:41 boinc_task_state.xml
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas      1048 Oct 13 03:42 memory_monitor_summary.json
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas    374812 Oct 13 03:42 log.46676269._091009.job.log.tgz.1
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas      7852 Oct 13 03:42 heartbeat.json
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas        95 Oct 13 03:42 pilot_heartbeat.json
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:42 boinc_mmap_file
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:42 wrapper_checkpoint.txt
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas      4818 Oct 13 03:43 pilotlog.txt
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas    656486 Oct 13 03:43 log.46676269._091009.job.log.1
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas       357 Oct 13 03:43 output.list
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:43 runtime_log
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas   1054720 Oct 13 03:43 result.tar.gz
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 03:43 runtime_log.err
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas       659 Oct 13 03:43 1GBNDmbfJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm0qlNDml3UkUo.diag
[2025-10-13 03:43:02] -rw-r--r-- 1 boincer umatlas     22176 Oct 13 03:43 stderr.txt
[2025-10-13 03:43:02] HITS file was successfully produced:
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas 199769982 Oct 13 03:41 shared/HITS.pool.root.1
[2025-10-13 03:43:02]  *** Contents of shared directory: ***
[2025-10-13 03:43:02] total 412616
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas 221097592 Oct 13 02:26 ATLAS.root_0
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:26 start_atlas.sh
[2025-10-13 03:43:02] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 02:26 input.tar.gz
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas 199769982 Oct 13 03:41 HITS.pool.root.1
[2025-10-13 03:43:02] -rw------- 1 boincer umatlas   1054720 Oct 13 03:43 result.tar.gz
03:43:03 (15640): run_atlas exited; CPU time 48780.836637
03:43:03 (15640): called boinc_finish(0)

</stderr_txt>
]]>

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