Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:47 (5695): wrapper (7.7.26015): starting
16:44:47 (5695): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 16:44:47] Arguments: --nthreads 8
[2025-10-13 16:44:47] Threads: 8
[2025-10-13 16:44:47] Checking for CVMFS
[2025-10-13 16:44:48] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 16:44:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 16:44:48] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 16:44:49] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 16:44:49] 2.11.2.0 22894 18343 68016 151664 3 60 20884915 25165825 4632 130560 0 5241186 99.957 1692183 1279 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-13 16:44:49] CVMFS is ok
[2025-10-13 16:44:49] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 16:44:49] Checking for apptainer binary...
[2025-10-13 16:44:49] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 16:44:49] Running /usr/bin/apptainer --version
[2025-10-13 16:44:49] apptainer version 1.3.2-1.el7
[2025-10-13 16:44:49] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 16:45:13] cg-vwn425.simple-grid.lan
[2025-10-13 16:45:13] apptainer works
[2025-10-13 16:45:13] Set ATHENA_PROC_NUMBER=8
[2025-10-13 16:45:13] Set ATHENA_CORE_NUMBER=8
[2025-10-13 16:45:13] Starting ATLAS job with PandaID=6840850879
[2025-10-13 16:45:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/17 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 21:00:24]  *** The last 200 lines of the pilot log: ***
[2025-10-13 21:00:24] 2025-10-13 18:59:24,535 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 21:00:24] 2025-10-13 18:59:24,544 | INFO     | fitting pss+swap vs Time
[2025-10-13 21:00:24] 2025-10-13 18:59:24,549 | INFO     | sum of square deviations: 4127772278.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,551 | INFO     | sum of deviations: 97394399744.00002
[2025-10-13 21:00:24] 2025-10-13 18:59:24,552 | INFO     | mean x: 1760374608.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,552 | INFO     | mean y: 2426784.1476793247
[2025-10-13 21:00:24] 2025-10-13 18:59:24,552 | INFO     | -- intersect: -41533446981.11028
[2025-10-13 21:00:24] 2025-10-13 18:59:24,552 | INFO     | intersect: -41533446981.11028
[2025-10-13 21:00:24] 2025-10-13 18:59:24,552 | INFO     | chi2: 6.04591744468064
[2025-10-13 21:00:24] 2025-10-13 18:59:24,557 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,559 | INFO     | sum of deviations: 110690129354.49998
[2025-10-13 21:00:24] 2025-10-13 18:59:24,559 | INFO     | mean x: 1760374455.5
[2025-10-13 21:00:24] 2025-10-13 18:59:24,560 | INFO     | mean y: 2434550.245689655
[2025-10-13 21:00:24] 2025-10-13 18:59:24,560 | INFO     | -- intersect: -50322085671.17961
[2025-10-13 21:00:24] 2025-10-13 18:59:24,560 | INFO     | intersect: -50322085671.17961
[2025-10-13 21:00:24] 2025-10-13 18:59:24,565 | INFO     | chi2: 5.311318115175275
[2025-10-13 21:00:24] 2025-10-13 18:59:24,565 | INFO     | current chi2=5.311318115175275 (change=12.150336755783616 %)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,565 | INFO     | right removable region: 231
[2025-10-13 21:00:24] 2025-10-13 18:59:24,565 | INFO     | sum of square deviations: 3871990738.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,567 | INFO     | sum of deviations: 18997847411.5
[2025-10-13 21:00:24] 2025-10-13 18:59:24,568 | INFO     | mean x: 1760374760.5
[2025-10-13 21:00:24] 2025-10-13 18:59:24,568 | INFO     | mean y: 2473477.625
[2025-10-13 21:00:24] 2025-10-13 18:59:24,568 | INFO     | -- intersect: -8634771120.82395
[2025-10-13 21:00:24] 2025-10-13 18:59:24,568 | INFO     | intersect: -8634771120.82395
[2025-10-13 21:00:24] 2025-10-13 18:59:24,568 | INFO     | chi2: 1.695099710528634
[2025-10-13 21:00:24] 2025-10-13 18:59:24,573 | INFO     | current chi2=1.695099710528634 (change=71.96290346273206 %)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,573 | INFO     | sum of square deviations: 3627000098.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,575 | INFO     | sum of deviations: -10348255025.000002
[2025-10-13 21:00:24] 2025-10-13 18:59:24,575 | INFO     | mean x: 1760374913.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,576 | INFO     | mean y: 2491591.537444934
[2025-10-13 21:00:24] 2025-10-13 18:59:24,576 | INFO     | -- intersect: 5025046884.376092
[2025-10-13 21:00:24] 2025-10-13 18:59:24,576 | INFO     | intersect: 5025046884.376092
[2025-10-13 21:00:24] 2025-10-13 18:59:24,576 | INFO     | chi2: 0.8341428160499856
[2025-10-13 21:00:24] 2025-10-13 18:59:24,581 | INFO     | current chi2=0.8341428160499856 (change=50.790929237439975 %)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,581 | INFO     | sum of square deviations: 3392567795.5
[2025-10-13 21:00:24] 2025-10-13 18:59:24,583 | INFO     | sum of deviations: -6974848671.500001
[2025-10-13 21:00:24] 2025-10-13 18:59:24,584 | INFO     | mean x: 1760375065.5
[2025-10-13 21:00:24] 2025-10-13 18:59:24,584 | INFO     | mean y: 2489361.626126126
[2025-10-13 21:00:24] 2025-10-13 18:59:24,584 | INFO     | -- intersect: 3621680024.000143
[2025-10-13 21:00:24] 2025-10-13 18:59:24,584 | INFO     | intersect: 3621680024.000143
[2025-10-13 21:00:24] 2025-10-13 18:59:24,589 | INFO     | chi2: 0.8107573561265976
[2025-10-13 21:00:24] 2025-10-13 18:59:24,589 | INFO     | current chi2=0.8107573561265976 (change=2.803531898066082 %)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,589 | INFO     | left removable region: 30
[2025-10-13 21:00:24] 2025-10-13 18:59:24,590 | INFO     | sum of square deviations: 2518000700.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,591 | INFO     | sum of deviations: 4762167398.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,591 | INFO     | mean x: 1760375340.0
[2025-10-13 21:00:24] 2025-10-13 18:59:24,591 | INFO     | mean y: 2501190.6716417912
[2025-10-13 21:00:24] 2025-10-13 18:59:24,592 | INFO     | -- intersect: -3326807674.2509
[2025-10-13 21:00:24] 2025-10-13 18:59:24,592 | INFO     | intersect: -3326807674.2509
[2025-10-13 21:00:24] 2025-10-13 18:59:24,592 | INFO     | chi2: 0.000442064146002306
[2025-10-13 21:00:24] 2025-10-13 18:59:24,592 | INFO     | -- intersect: -3326807674.2509
[2025-10-13 21:00:24] 2025-10-13 18:59:24,597 | INFO     | current memory leak: 1.89 B/s (using 201 data points, chi2=0.00)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,597 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | ..............................
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | . Timing measurements:
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | . get job = 0 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | . initial setup = 6 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | . payload setup = 131 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,598 | INFO     | . stage-in = 0 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,599 | INFO     | . payload execution = 14604 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,599 | INFO     | . stage-out = 2 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,599 | INFO     | . log creation = 1 s
[2025-10-13 21:00:24] 2025-10-13 18:59:24,599 | INFO     | ..............................
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | 
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | job summary report
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | --------------------------------------------------
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | PanDA job id: 6840850879
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | task id: 46676269
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | errors: (none)
[2025-10-13 21:00:24] 2025-10-13 18:59:25,117 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | pilot state: finished 
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | transexitcode: 0
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | exeerrorcode: 0
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | exeerrordiag: 
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | exitcode: 0
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | exitmsg: OK
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | cpuconsumptiontime: 54458 s
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | nevents: 400
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | neventsw: 0
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | pid: 16114
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | pgrp: 16114
[2025-10-13 21:00:24] 2025-10-13 18:59:25,118 | INFO     | corecount: 8
[2025-10-13 21:00:24] 2025-10-13 18:59:25,119 | INFO     | event service: False
[2025-10-13 21:00:24] 2025-10-13 18:59:25,119 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2348885, 23: 2348913, 33: 2348941, 44: 2348997, 55: 2349153, 66: 2349181, 76: 2349209, 87: 2349265, 98: 2349293, 99: 2349863, 1
[2025-10-13 21:00:24] 2025-10-13 18:59:25,119 | INFO     | --------------------------------------------------
[2025-10-13 21:00:24] 2025-10-13 18:59:25,119 | INFO     | 
[2025-10-13 21:00:24] 2025-10-13 18:59:25,119 | INFO     | executing command: ls -lF /var/lib/boinc/slots/17
[2025-10-13 21:00:24] 2025-10-13 18:59:25,394 | INFO     | time since job start (15038s) is within the limit (172800.0s)
[2025-10-13 21:00:24] 2025-10-13 18:59:25,518 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,518 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,519 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,520 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 21:00:24] 2025-10-13 18:59:25,521 | INFO     | job 6840850879 has completed (purged errors)
[2025-10-13 21:00:24] 2025-10-13 18:59:25,521 | INFO     | overall cleanup function is called
[2025-10-13 21:00:24] 2025-10-13 18:59:26,530 | INFO     | --- collectZombieJob: --- 10, [16114]
[2025-10-13 21:00:24] 2025-10-13 18:59:26,530 | INFO     | zombie collector waiting for pid 16114
[2025-10-13 21:00:24] 2025-10-13 18:59:26,530 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 21:00:24] 2025-10-13 18:59:26,530 | INFO     | collected zombie processes
[2025-10-13 21:00:24] 2025-10-13 18:59:26,530 | INFO     | will attempt to kill all subprocesses of pid=16114
[2025-10-13 21:00:24] 2025-10-13 18:59:26,640 | INFO     | process IDs to be killed: [16114] (in reverse order)
[2025-10-13 21:00:24] 2025-10-13 18:59:27,445 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 21:00:24] 2025-10-13 18:59:27,446 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 21:00:24] 2025-10-13 18:59:27,456 | INFO     | did not find any defunct processes belonging to 16114
[2025-10-13 21:00:24] 2025-10-13 18:59:27,459 | INFO     | did not find any defunct processes belonging to 16114
[2025-10-13 21:00:24] 2025-10-13 18:59:27,460 | INFO     | ready for new job
[2025-10-13 21:00:24] 2025-10-13 18:59:27,460 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 21:00:24] 2025-10-13 18:59:27,462 | INFO     | ***************************************
[2025-10-13 21:00:24] 2025-10-13 18:59:27,462 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 21:00:24] 2025-10-13 18:59:27,462 | INFO     | ***************************************
[2025-10-13 21:00:24] 2025-10-13 18:59:27,462 | INFO     | 
[2025-10-13 21:00:24] 2025-10-13 18:59:27,463 | INFO     | pilot is running in a VM
[2025-10-13 21:00:24] 2025-10-13 18:59:27,463 | INFO     | architecture information:
[2025-10-13 21:00:24] 2025-10-13 18:59:27,473 | INFO     | executing command: cat /etc/os-release
[2025-10-13 21:00:24] 2025-10-13 18:59:27,694 | INFO     | cat /etc/os-release:
[2025-10-13 21:00:24] NAME="CentOS Linux"
[2025-10-13 21:00:24] VERSION="7 (Core)"
[2025-10-13 21:00:24] ID="centos"
[2025-10-13 21:00:24] ID_LIKE="rhel fedora"
[2025-10-13 21:00:24] VERSION_ID="7"
[2025-10-13 21:00:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 21:00:24] ANSI_COLOR="0;31"
[2025-10-13 21:00:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 21:00:24] HOME_URL="https://www.centos.org/"
[2025-10-13 21:00:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 21:00:24] 
[2025-10-13 21:00:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 21:00:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 21:00:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 21:00:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 21:00:24] 
[2025-10-13 21:00:24] 2025-10-13 18:59:27,695 | INFO     | ***************************************
[2025-10-13 21:00:24] 2025-10-13 18:59:28,198 | INFO     | executing command: df -mP /var/lib/boinc/slots/17
[2025-10-13 21:00:24] 2025-10-13 18:59:28,425 | INFO     | sufficient remaining disk space (495363031040 B)
[2025-10-13 21:00:24] 2025-10-13 18:59:28,425 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 21:00:24] 2025-10-13 18:59:28,425 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 21:00:24] 2025-10-13 18:59:28,425 | INFO     | update_server=False
[2025-10-13 21:00:24] 2025-10-13 18:59:28,426 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 21:00:24] 2025-10-13 18:59:28,881 | INFO     | all job control threads have been joined
[2025-10-13 21:00:24] 2025-10-13 18:59:28,914 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:00:24] 2025-10-13 18:59:28,914 | INFO     | aborting loop
[2025-10-13 21:00:24] 2025-10-13 18:59:28,978 | INFO     | all data control threads have been joined
[2025-10-13 21:00:24] 2025-10-13 18:59:29,432 | INFO     | [job] retrieve thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:29,668 | INFO     | all payload control threads have been joined
[2025-10-13 21:00:24] 2025-10-13 18:59:29,676 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 21:00:24] 2025-10-13 18:59:29,745 | INFO     | [data] copytool_in thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:29,751 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 21:00:24] 2025-10-13 18:59:29,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 21:00:24] 2025-10-13 18:59:29,886 | INFO     | [job] control thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:29,920 | INFO     | [job] job monitor thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:29,984 | INFO     | [data] control thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,029 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,159 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,159 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,226 | INFO     | [job] validate thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,338 | INFO     | [payload] failed_post thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,641 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,674 | INFO     | [payload] control thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:30,760 | INFO     | [job] queue monitor thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:31,008 | INFO     | [payload] validate_post thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:31,683 | INFO     | [data] copytool_out thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:33,760 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 21:00:24] 2025-10-13 18:59:58,561 | INFO     | PID=9492 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-13 21:00:24] 2025-10-13 18:59:58,561 | INFO     | .. there are 9 such processes running
[2025-10-13 21:00:24] 2025-10-13 18:59:58,565 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 21:00:24] 2025-10-13 18:59:58,565 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 21:00:24] 2025-10-13 18:59:58,565 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 21:00:24] 2025-10-13 19:00:12,287 | INFO     | [monitor] cgroup control has ended
[2025-10-13 21:00:24] 2025-10-13 19:00:14,264 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140038090983232)>', '<ExcThread(monitor, started 140037651941120)>']
[2025-10-13 21:00:24] 2025-10-13 19:00:14,660 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 21:00:24] 2025-10-13 19:00:14,660 | INFO     | [monitor] control thread has ended
[2025-10-13 21:00:24] 2025-10-13 19:00:19,290 | INFO     | all workflow threads have been joined
[2025-10-13 21:00:24] 2025-10-13 19:00:19,290 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 21:00:24] 2025-10-13 19:00:19,290 | INFO     | traces error code: 0
[2025-10-13 21:00:24] 2025-10-13 19:00:19,291 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 21:00:24] 2025-10-13 19:00:19,654 [wrapper] ==== pilot stdout END ====
[2025-10-13 21:00:24] 2025-10-13 19:00:19,734 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 21:00:24] 2025-10-13 19:00:19,821 [wrapper] pilotpid: 9492
[2025-10-13 21:00:24] 2025-10-13 19:00:19,914 [wrapper] Pilot exit status: 0
[2025-10-13 21:00:24] 2025-10-13 19:00:20,406 [wrapper] pandaids: 6840850879
[2025-10-13 21:00:24] 2025-10-13 19:00:21,530 [wrapper] cleanup supervisor_pilot 25925 9493
[2025-10-13 21:00:24] 2025-10-13 19:00:21,643 [wrapper] Test setup, not cleaning
[2025-10-13 21:00:24] 2025-10-13 19:00:21,759 [wrapper] apfmon messages muted
[2025-10-13 21:00:24] 2025-10-13 19:00:21,856 [wrapper] ==== wrapper stdout END ====
[2025-10-13 21:00:24] 2025-10-13 19:00:21,978 [wrapper] ==== wrapper stderr END ====
[2025-10-13 21:00:24]  *** Error codes and diagnostics ***
[2025-10-13 21:00:24]     "exeErrorCode": 0,
[2025-10-13 21:00:24]     "exeErrorDiag": "",
[2025-10-13 21:00:24]     "pilotErrorCode": 0,
[2025-10-13 21:00:24]     "pilotErrorDiag": "",
[2025-10-13 21:00:24]  *** Listing of results directory ***
[2025-10-13 21:00:24] total 415700
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc    557409 Oct 12 23:57 pilot3.tar.gz
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc      5112 Oct 13 00:15 queuedata.json
[2025-10-13 21:00:24] -rwx------. 1 boinc boinc     36292 Oct 13 00:15 runpilot2-wrapper.sh
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc       100 Oct 13 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 21:00:24] -rwxr-xr-x. 1 boinc boinc      7986 Oct 13 16:44 run_atlas
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc       105 Oct 13 16:44 job.xml
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc 222491257 Oct 13 16:44 EVNT.46676267._004335.pool.root.1
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:44 start_atlas.sh
[2025-10-13 21:00:24] drwxrwx--x. 2 boinc boinc        68 Oct 13 16:44 shared
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc    569678 Oct 13 16:44 input.tar.gz
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc      6391 Oct 13 16:44 init_data.xml
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc         0 Oct 13 16:44 boinc_lockfile
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc      2549 Oct 13 16:45 pandaJob.out
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc    972791 Oct 13 16:48 agis_schedconf.cvmfs.json
[2025-10-13 21:00:24] drwx------. 5 boinc boinc      4096 Oct 13 16:48 pilot3
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc 194282186 Oct 13 20:56 HITS.46676269._090827.pool.root.1
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc       531 Oct 13 20:56 boinc_task_state.xml
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc      1018 Oct 13 20:57 memory_monitor_summary.json
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc   1560580 Oct 13 20:57 agis_ddmendpoints.agis.ALL.json
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc    482763 Oct 13 20:57 log.46676269._090827.job.log.tgz.1
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc      7782 Oct 13 20:59 heartbeat.json
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc        28 Oct 13 20:59 wrapper_checkpoint.txt
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc      8192 Oct 13 20:59 boinc_mmap_file
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc        95 Oct 13 20:59 pilot_heartbeat.json
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc      4884 Oct 13 21:00 pilotlog.txt
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc   2023260 Oct 13 21:00 log.46676269._090827.job.log.1
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc       357 Oct 13 21:00 output.list
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc       620 Oct 13 21:00 runtime_log
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc   2529280 Oct 13 21:00 result.tar.gz
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc      8717 Oct 13 21:00 runtime_log.err
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc       656 Oct 13 21:00 531MDmfWJS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmGplNDmz1ovUo.diag
[2025-10-13 21:00:24] -rw-r--r--. 1 boinc boinc     20605 Oct 13 21:00 stderr.txt
[2025-10-13 21:00:24] HITS file was successfully produced:
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc 194282186 Oct 13 20:56 shared/HITS.pool.root.1
[2025-10-13 21:00:24]  *** Contents of shared directory: ***
[2025-10-13 21:00:24] total 410060
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc 222491257 Oct 13 16:44 ATLAS.root_0
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc     15120 Oct 13 16:44 start_atlas.sh
[2025-10-13 21:00:24] -rw-r--r--. 2 boinc boinc    569678 Oct 13 16:44 input.tar.gz
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc 194282186 Oct 13 20:56 HITS.pool.root.1
[2025-10-13 21:00:24] -rw-------. 1 boinc boinc   2529280 Oct 13 21:00 result.tar.gz
21:00:26 (5695): run_atlas exited; CPU time 54667.571499
21:00:26 (5695): called boinc_finish(0)

</stderr_txt>
]]>

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