Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
02:42:15 (1723658): wrapper (7.7.26015): starting
02:42:15 (1723658): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 02:42:15] Arguments: --nthreads 9
[2025-10-13 02:42:15] Threads: 9
[2025-10-13 02:42:15] Checking for CVMFS
[2025-10-13 02:42:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:42:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:42:16] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:42:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:42:36] 2.13.2.0 1149533 130340 373960 151652 3 16 28416388 32935937 28540 16776704 0 263803664 99.632 242984018 20657 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 02:42:36] CVMFS is ok
[2025-10-13 02:42:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:42:36] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:42:36] Further information can be found at the LHC@home message board.
[2025-10-13 02:42:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:42:36] Checking for apptainer binary...
[2025-10-13 02:42:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:42:36] Running /usr/bin/apptainer --version
[2025-10-13 02:42:36] apptainer version 1.4.3-1.el9
[2025-10-13 02:42:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:42:37] c6-2-11-4.aglt2.org
[2025-10-13 02:42:37] apptainer works
[2025-10-13 02:42:37] Set ATHENA_PROC_NUMBER=9
[2025-10-13 02:42:37] Set ATHENA_CORE_NUMBER=9
[2025-10-13 02:42:37] Starting ATLAS job with PandaID=6841069329
[2025-10-13 02:42:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:07:47]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:07:47] 2025-10-13 09:06:47,998 | INFO     | sum of square deviations: 832717959.7410053
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | sum of deviations: -12091563303.381294
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | mean x: 1760342132.0431654
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | mean y: 2184276.2302158275
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | -- intersect: 25563405907.416542
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | intersect: 25563405907.416542
[2025-10-13 05:07:47] 2025-10-13 09:06:47,999 | INFO     | chi2: 3.3377725025423555
[2025-10-13 05:07:47] 2025-10-13 09:06:48,000 | INFO     | sum of square deviations: 746048397.231344
[2025-10-13 05:07:47] 2025-10-13 09:06:48,000 | INFO     | sum of deviations: -411810166.35075265
[2025-10-13 05:07:47] 2025-10-13 09:06:48,000 | INFO     | mean x: 1760341979.5447762
[2025-10-13 05:07:47] 2025-10-13 09:06:48,001 | INFO     | mean y: 2204402.1417910447
[2025-10-13 05:07:47] 2025-10-13 09:06:48,001 | INFO     | -- intersect: 973893003.2041605
[2025-10-13 05:07:47] 2025-10-13 09:06:48,030 | INFO     | intersect: 973893003.2041605
[2025-10-13 05:07:47] 2025-10-13 09:06:48,030 | INFO     | chi2: 2.4964983667392544
[2025-10-13 05:07:47] 2025-10-13 09:06:48,030 | INFO     | current chi2=2.4964983667392544 (change=25.204657751908165 %)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,031 | INFO     | sum of square deviations: 665603334.8062029
[2025-10-13 05:07:47] 2025-10-13 09:06:48,031 | INFO     | sum of deviations: 264302364.83721414
[2025-10-13 05:07:47] 2025-10-13 09:06:48,031 | INFO     | mean x: 1760341827.0387597
[2025-10-13 05:07:47] 2025-10-13 09:06:48,031 | INFO     | mean y: 2205672.2325581396
[2025-10-13 05:07:47] 2025-10-13 09:06:48,031 | INFO     | -- intersect: -696803006.7784511
[2025-10-13 05:07:47] 2025-10-13 09:06:48,032 | INFO     | intersect: -696803006.7784511
[2025-10-13 05:07:47] 2025-10-13 09:06:48,032 | INFO     | chi2: 2.4990292966457335
[2025-10-13 05:07:47] 2025-10-13 09:06:48,032 | INFO     | current chi2=2.4990292966457335 (change=-0.10137919336133158 %)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,032 | INFO     | right removable region: 128
[2025-10-13 05:07:47] 2025-10-13 09:06:48,032 | INFO     | sum of square deviations: 746044737.231344
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | sum of deviations: -36445014792.783585
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | mean x: 1760342284.5447762
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | mean y: 2226703.380597015
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | -- intersect: 85996668321.83614
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | intersect: 85996668321.83614
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | chi2: 1.3419341468760484
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | current chi2=1.3419341468760484 (change=59.795517943361695 %)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,033 | INFO     | sum of square deviations: 665612484.8062029
[2025-10-13 05:07:47] 2025-10-13 09:06:48,062 | INFO     | sum of deviations: -38197878350.286835
[2025-10-13 05:07:47] 2025-10-13 09:06:48,082 | INFO     | mean x: 1760342437.0387597
[2025-10-13 05:07:47] 2025-10-13 09:06:48,082 | INFO     | mean y: 2229792.4573643412
[2025-10-13 05:07:47] 2025-10-13 09:06:48,082 | INFO     | -- intersect: 101023992153.82854
[2025-10-13 05:07:47] 2025-10-13 09:06:48,082 | INFO     | intersect: 101023992153.82854
[2025-10-13 05:07:47] 2025-10-13 09:06:48,083 | INFO     | chi2: 1.2053390965609736
[2025-10-13 05:07:47] 2025-10-13 09:06:48,083 | INFO     | current chi2=1.2053390965609736 (change=10.178968217856356 %)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,083 | INFO     | left removable region: 20
[2025-10-13 05:07:47] 2025-10-13 09:06:48,083 | INFO     | sum of square deviations: 390575500.8518512
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | sum of deviations: -15613163580.203705
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | mean x: 1760342406.5370371
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | mean y: 2233476.675925926
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | -- intersect: 70371506230.56873
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | intersect: 70371506230.56873
[2025-10-13 05:07:47] 2025-10-13 09:06:48,084 | INFO     | chi2: 0.2732121947522519
[2025-10-13 05:07:47] 2025-10-13 09:06:48,085 | INFO     | -- intersect: 70371506230.56873
[2025-10-13 05:07:47] 2025-10-13 09:06:48,085 | INFO     | current memory leak: -39.97 B/s (using 108 data points, chi2=0.27)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,085 | INFO     | could have reported an average CPU frequency of 2711 MHz (8 samples)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,086 | INFO     | ..............................
[2025-10-13 05:07:47] 2025-10-13 09:06:48,086 | INFO     | . Timing measurements:
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . get job = 0 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . initial setup = 5 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . payload setup = 35 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . stage-in = 0 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . payload execution = 8477 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . stage-out = 1 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | . log creation = 0 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,101 | INFO     | ..............................
[2025-10-13 05:07:47] 2025-10-13 09:06:48,388 | INFO     | time since job start (8603s) is within the limit (172800.0s)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,398 | INFO     | 
[2025-10-13 05:07:47] 2025-10-13 09:06:48,398 | INFO     | job summary report
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | --------------------------------------------------
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | PanDA job id: 6841069329
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | task id: 46676269
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | errors: (none)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | pilot state: finished 
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | transexitcode: 0
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | exeerrorcode: 0
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | exeerrordiag: 
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | exitcode: 0
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | exitmsg: OK
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | cpuconsumptiontime: 42252 s
[2025-10-13 05:07:47] 2025-10-13 09:06:48,399 | INFO     | nevents: 400
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | neventsw: 0
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | pid: 1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | pgrp: 1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | corecount: 9
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | event service: False
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | sizes: {0: 2348635, 1: 2348834, 12: 2348834, 23: 2348862, 25: 2349152, 34: 2349180, 8517: 2377457, 8521: 2386511, 8547: 2386649}
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | --------------------------------------------------
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | 
[2025-10-13 05:07:47] 2025-10-13 09:06:48,400 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 05:07:47] 2025-10-13 09:06:48,514 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,514 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,515 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | job 6841069329 has completed (purged errors)
[2025-10-13 05:07:47] 2025-10-13 09:06:48,516 | INFO     | overall cleanup function is called
[2025-10-13 05:07:47] 2025-10-13 09:06:49,534 | INFO     | --- collectZombieJob: --- 10, [1739350]
[2025-10-13 05:07:47] 2025-10-13 09:06:49,534 | INFO     | zombie collector waiting for pid 1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:49,534 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:07:47] 2025-10-13 09:06:49,534 | INFO     | collected zombie processes
[2025-10-13 05:07:47] 2025-10-13 09:06:49,534 | INFO     | will attempt to kill all subprocesses of pid=1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:50,758 | INFO     | process IDs to be killed: [1739350] (in reverse order)
[2025-10-13 05:07:47] 2025-10-13 09:06:50,973 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:07:47] 2025-10-13 09:06:50,973 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:07:47] 2025-10-13 09:06:51,044 | INFO     | did not find any defunct processes belonging to 1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:51,105 | INFO     | did not find any defunct processes belonging to 1739350
[2025-10-13 05:07:47] 2025-10-13 09:06:51,105 | INFO     | ready for new job
[2025-10-13 05:07:47] 2025-10-13 09:06:51,105 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:07:47] 2025-10-13 09:06:51,107 | INFO     | ***************************************
[2025-10-13 05:07:47] 2025-10-13 09:06:51,107 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:07:47] 2025-10-13 09:06:51,107 | INFO     | ***************************************
[2025-10-13 05:07:47] 2025-10-13 09:06:51,107 | INFO     | 
[2025-10-13 05:07:47] 2025-10-13 09:06:51,130 | INFO     | architecture information:
[2025-10-13 05:07:47] 2025-10-13 09:06:51,134 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:07:47] 2025-10-13 09:06:51,186 | INFO     | cat /etc/os-release:
[2025-10-13 05:07:47] NAME="CentOS Linux"
[2025-10-13 05:07:47] VERSION="7 (Core)"
[2025-10-13 05:07:47] ID="centos"
[2025-10-13 05:07:47] ID_LIKE="rhel fedora"
[2025-10-13 05:07:47] VERSION_ID="7"
[2025-10-13 05:07:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:07:47] ANSI_COLOR="0;31"
[2025-10-13 05:07:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:07:47] HOME_URL="https://www.centos.org/"
[2025-10-13 05:07:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:07:47] 
[2025-10-13 05:07:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:07:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:07:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:07:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:07:47] 
[2025-10-13 05:07:47] 2025-10-13 09:06:51,186 | INFO     | ***************************************
[2025-10-13 05:07:47] 2025-10-13 09:06:51,690 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 05:07:47] 2025-10-13 09:06:51,864 | INFO     | sufficient remaining disk space (93395615744 B)
[2025-10-13 05:07:47] 2025-10-13 09:06:51,865 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:07:47] 2025-10-13 09:06:51,865 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:07:47] 2025-10-13 09:06:51,865 | INFO     | update_server=False
[2025-10-13 05:07:47] 2025-10-13 09:06:51,865 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:07:47] 2025-10-13 09:06:51,866 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:07:47] 2025-10-13 09:06:52,205 | INFO     | all job control threads have been joined
[2025-10-13 05:07:47] 2025-10-13 09:06:52,259 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:07:47] 2025-10-13 09:06:52,259 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:07:47] 2025-10-13 09:06:52,259 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:07:47] 2025-10-13 09:06:52,259 | INFO     | will abort loop
[2025-10-13 05:07:47] 2025-10-13 09:06:52,264 | INFO     | all payload control threads have been joined
[2025-10-13 05:07:47] 2025-10-13 09:06:52,871 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:52,932 | INFO     | all data control threads have been joined
[2025-10-13 05:07:47] 2025-10-13 09:06:53,087 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,167 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,211 | INFO     | [job] control thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,214 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:07:47] 2025-10-13 09:06:53,270 | INFO     | [payload] control thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,272 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,281 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,428 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:07:47] 2025-10-13 09:06:53,429 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,721 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:53,959 | INFO     | [data] control thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:54,028 | INFO     | [job] validate thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:54,300 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:54,434 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:55,221 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:06:55,875 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:07:02,265 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:07:47] 2025-10-13 09:07:03,270 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:07:47] 2025-10-13 09:07:22,146 | INFO     | PID=1729464 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 05:07:47] 2025-10-13 09:07:22,146 | INFO     | .. there are 44 such processes running
[2025-10-13 05:07:47] 2025-10-13 09:07:22,151 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:07:47] 2025-10-13 09:07:22,151 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:07:47] 2025-10-13 09:07:22,151 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:07:47] 2025-10-13 09:07:39,357 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:07:47] 2025-10-13 09:07:41,099 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140358337828672)>', '<ExcThread(monitor, started 140357710898944)>']
[2025-10-13 05:07:47] 2025-10-13 09:07:41,272 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:07:47] 2025-10-13 09:07:41,272 | INFO     | [monitor] control thread has ended
[2025-10-13 05:07:47] 2025-10-13 09:07:46,125 | INFO     | all workflow threads have been joined
[2025-10-13 05:07:47] 2025-10-13 09:07:46,125 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:07:47] 2025-10-13 09:07:46,125 | INFO     | traces error code: 0
[2025-10-13 05:07:47] 2025-10-13 09:07:46,126 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:07:47] 2025-10-13 09:07:46,726 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:07:47] 2025-10-13 09:07:46,770 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:07:47] 2025-10-13 09:07:46,816 [wrapper] pilotpid: 1729464
[2025-10-13 05:07:47] 2025-10-13 09:07:46,833 [wrapper] Pilot exit status: 0
[2025-10-13 05:07:47] 2025-10-13 09:07:46,896 [wrapper] pandaids: 6841069329
[2025-10-13 05:07:47] 2025-10-13 09:07:47,023 [wrapper] cleanup supervisor_pilot 2453983 1729465
[2025-10-13 05:07:47] 2025-10-13 09:07:47,045 [wrapper] Test setup, not cleaning
[2025-10-13 05:07:47] 2025-10-13 09:07:47,059 [wrapper] apfmon messages muted
[2025-10-13 05:07:47] 2025-10-13 09:07:47,088 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:07:47] 2025-10-13 09:07:47,091 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:07:47]  *** Error codes and diagnostics ***
[2025-10-13 05:07:47]     "exeErrorCode": 0,
[2025-10-13 05:07:47]     "exeErrorDiag": "",
[2025-10-13 05:07:47]     "pilotErrorCode": 0,
[2025-10-13 05:07:47]     "pilotErrorDiag": "",
[2025-10-13 05:07:47]  *** Listing of results directory ***
[2025-10-13 05:07:47] total 408928
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:11 pilot3.tar.gz
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 20:44 queuedata.json
[2025-10-13 05:07:47] -rwx------. 1 boincer umatlas     36292 Oct 12 20:46 runpilot2-wrapper.sh
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas       100 Oct 13 02:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:07:47] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 02:42 run_atlas
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas       105 Oct 13 02:42 job.xml
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas 219543413 Oct 13 02:42 EVNT.46676267._004705.pool.root.1
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 02:42 input.tar.gz
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:42 start_atlas.sh
[2025-10-13 05:07:47] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 02:42 shared
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas         0 Oct 13 02:42 boinc_lockfile
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas      2549 Oct 13 02:42 pandaJob.out
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas    972849 Oct 13 02:43 agis_schedconf.cvmfs.json
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas   1560580 Oct 13 02:43 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:07:47] drwx------. 5 boincer umatlas      4096 Oct 13 02:43 pilot3
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 05:01 init_data.xml
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas 192155960 Oct 13 05:05 HITS.46676269._093461.pool.root.1
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas       530 Oct 13 05:05 boinc_task_state.xml
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas      1056 Oct 13 05:06 memory_monitor_summary.json
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas    397371 Oct 13 05:06 log.46676269._093461.job.log.tgz.1
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas      7833 Oct 13 05:06 heartbeat.json
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas        95 Oct 13 05:07 pilot_heartbeat.json
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 05:07 boinc_mmap_file
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas        27 Oct 13 05:07 wrapper_checkpoint.txt
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas      5082 Oct 13 05:07 pilotlog.txt
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas   1168516 Oct 13 05:07 log.46676269._093461.job.log.1
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas       357 Oct 13 05:07 output.list
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas       620 Oct 13 05:07 runtime_log
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas   1587200 Oct 13 05:07 result.tar.gz
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas      8708 Oct 13 05:07 runtime_log.err
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas       653 Oct 13 05:07 1vLODmqsLS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlPVMDm5vgz0n.diag
[2025-10-13 05:07:47] -rw-r--r--. 1 boincer umatlas     21059 Oct 13 05:07 stderr.txt
[2025-10-13 05:07:47] HITS file was successfully produced:
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas 192155960 Oct 13 05:05 shared/HITS.pool.root.1
[2025-10-13 05:07:47]  *** Contents of shared directory: ***
[2025-10-13 05:07:47] total 404192
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas 219543413 Oct 13 02:42 ATLAS.root_0
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas    569678 Oct 13 02:42 input.tar.gz
[2025-10-13 05:07:47] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 02:42 start_atlas.sh
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas 192155960 Oct 13 05:05 HITS.pool.root.1
[2025-10-13 05:07:47] -rw-------. 1 boincer umatlas   1587200 Oct 13 05:07 result.tar.gz
05:07:48 (1723658): run_atlas exited; CPU time 42670.887386
05:07:48 (1723658): called boinc_finish(0)

</stderr_txt>
]]>

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