Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:19:58 (27094): wrapper (7.7.26015): starting
02:19:58 (27094): wrapper: running run_atlas (--nthreads 12)
[2025-10-13 02:19:58] Arguments: --nthreads 12
[2025-10-13 02:19:58] Threads: 12
[2025-10-13 02:19:58] Checking for CVMFS
[2025-10-13 02:19:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:19:58] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:19:58] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:19:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:19:58] 2.11.2.0 2998 39666 89396 151650 0 57 15748369 20275200 1 130560 0 25144249 99.991 1293524 44953 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:19:58] CVMFS is ok
[2025-10-13 02:19:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:19:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:19:58] Further information can be found at the LHC@home message board.
[2025-10-13 02:19:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:19:58] Checking for apptainer binary...
[2025-10-13 02:19:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:19:58] Running /usr/bin/apptainer --version
[2025-10-13 02:19:58] apptainer version 1.3.2-1.el7
[2025-10-13 02:19:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:20:00] c-205-12.aglt2.org
[2025-10-13 02:20:00] apptainer works
[2025-10-13 02:20:00] Set ATHENA_PROC_NUMBER=12
[2025-10-13 02:20:00] Set ATHENA_CORE_NUMBER=12
[2025-10-13 02:20:00] Starting ATLAS job with PandaID=6841070113
[2025-10-13 02:20:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 03:33:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 03:33:43]  scope=mc23_13p6TeV
[2025-10-13 03:33:43]  status=None
[2025-10-13 03:33:43]  status_code=0
[2025-10-13 03:33:43]  storage_token=
[2025-10-13 03:33:43]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6841070113/log.46676269._093918.job.log.tgz.1
[2025-10-13 03:33:43]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/87/log.46676269._093918.job.log.tgz.1
[2025-10-13 03:33:43]  workdir=None
[2025-10-13 03:33:43] ]
[2025-10-13 03:33:43] 2025-10-13 07:33:01,325 | INFO     | transferring file log.46676269._093918.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6841070113/log.46676269._093918.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-13 03:33:43] 2025-10-13 07:33:01,325 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6841070113/log.46676269._093918.job.log.tgz.1 /tmp/boinchome/slots/0/log.46676269._093918.job
[2025-10-13 03:33:43] 2025-10-13 07:33:01,350 | INFO     | adding to output.list: log.46676269._093918.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/34/87/log.46676269._093918.job.log.tg
[2025-10-13 03:33:43] 2025-10-13 07:33:01,351 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-13 03:33:43] 2025-10-13 07:33:01,351 | INFO     | summary of transferred files:
[2025-10-13 03:33:43] 2025-10-13 07:33:01,351 | INFO     |  -- lfn=log.46676269._093918.job.log.tgz.1, status_code=0, status=transferred
[2025-10-13 03:33:43] 2025-10-13 07:33:01,352 | INFO     | stage-out finished correctly
[2025-10-13 03:33:43] 2025-10-13 07:33:01,859 | INFO     | time since job start (4367s) is within the limit (172800.0s)
[2025-10-13 03:33:43] 2025-10-13 07:33:02,626 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-13 03:33:43] 2025-10-13 07:33:03,865 | INFO     | time since job start (4369s) is within the limit (172800.0s)
[2025-10-13 03:33:43] 2025-10-13 07:33:04,984 | INFO     | PID=617 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 03:33:43] 2025-10-13 07:33:05,222 | INFO     | job 6841070113 has state=finished
[2025-10-13 03:33:43] 2025-10-13 07:33:05,223 | INFO     | preparing for final server update for job 6841070113 in state='finished'
[2025-10-13 03:33:43] 2025-10-13 07:33:05,223 | INFO     | this job has now completed (state=finished)
[2025-10-13 03:33:43] 2025-10-13 07:33:05,223 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-13 03:33:43] 2025-10-13 07:33:05,223 | INFO     | log transfer has been attempted: DONE
[2025-10-13 03:33:43] 2025-10-13 07:33:05,224 | INFO     | job 6841070113 has finished - writing final server update
[2025-10-13 03:33:43] 2025-10-13 07:33:05,224 | INFO     | total number of processed events: 400 (read)
[2025-10-13 03:33:43] 2025-10-13 07:33:05,225 | INFO     | executing command: lscpu
[2025-10-13 03:33:43] 2025-10-13 07:33:05,258 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-13 03:33:43] 2025-10-13 07:33:05,985 | INFO     | time since job start (4371s) is within the limit (172800.0s)
[2025-10-13 03:33:43] 2025-10-13 07:33:06,858 | WARNING  | process 7229 can no longer be monitored (due to stat problems) - aborting
[2025-10-13 03:33:43] 2025-10-13 07:33:06,859 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841070113/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:33:43] 2025-10-13 07:33:06,946 | INFO     | number of running child processes to parent process 7229: 1
[2025-10-13 03:33:43] 2025-10-13 07:33:06,946 | INFO     | maximum number of monitored processes: 6
[2025-10-13 03:33:43] 2025-10-13 07:33:07,990 | INFO     | time since job start (4373s) is within the limit (172800.0s)
[2025-10-13 03:33:43] 2025-10-13 07:33:09,455 | INFO     | monitor loop #328: job 0:6841070113 is in state 'finished'
[2025-10-13 03:33:43] 2025-10-13 07:33:09,455 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-13 03:33:43] 2025-10-13 07:33:09,949 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-13 03:33:43] 2025-10-13 07:33:09,952 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-13 03:33:43] 2025-10-13 07:33:09,954 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6841070113/memory_monitor_summary.json (trf name=prmon)
[2025-10-13 03:33:43] 2025-10-13 07:33:09,955 | INFO     | extracted standard info from prmon json
[2025-10-13 03:33:43] 2025-10-13 07:33:09,955 | INFO     | extracted standard memory fields from prmon json
[2025-10-13 03:33:43] 2025-10-13 07:33:09,955 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-13 03:33:43] 2025-10-13 07:33:09,956 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-13 03:33:43] 2025-10-13 07:33:09,956 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 03:33:43] 2025-10-13 07:33:09,958 | INFO     | fitting pss+swap vs Time
[2025-10-13 03:33:43] 2025-10-13 07:33:09,958 | INFO     | sum of square deviations: 85136480.0
[2025-10-13 03:33:43] 2025-10-13 07:33:09,958 | INFO     | sum of deviations: -2821923562.0000005
[2025-10-13 03:33:43] 2025-10-13 07:33:09,959 | INFO     | mean x: 1760338701.0
[2025-10-13 03:33:43] 2025-10-13 07:33:09,959 | INFO     | mean y: 2740893.2615384613
[2025-10-13 03:33:43] 2025-10-13 07:33:09,959 | INFO     | -- intersect: 58350716490.23682
[2025-10-13 03:33:43] 2025-10-13 07:33:09,959 | INFO     | intersect: 58350716490.23682
[2025-10-13 03:33:43] 2025-10-13 07:33:09,959 | INFO     | chi2: 0.06480904800140858
[2025-10-13 03:33:43] 2025-10-13 07:33:09,960 | INFO     | -- intersect: 58350716490.23682
[2025-10-13 03:33:43] 2025-10-13 07:33:09,960 | INFO     | current memory leak: -33.15 B/s (using 65 data points, chi2=0.06)
[2025-10-13 03:33:43] 2025-10-13 07:33:09,960 | INFO     | could have reported an average CPU frequency of 2034 MHz (6 samples)
[2025-10-13 03:33:43] 2025-10-13 07:33:09,960 | INFO     | ..............................
[2025-10-13 03:33:43] 2025-10-13 07:33:09,960 | INFO     | . Timing measurements:
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . get job = 0 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . initial setup = 2 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . payload setup = 7 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . stage-in = 0 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . payload execution = 4338 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . stage-out = 0 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | . log creation = 0 s
[2025-10-13 03:33:43] 2025-10-13 07:33:09,961 | INFO     | ..............................
[2025-10-13 03:33:43] 2025-10-13 07:33:10,001 | INFO     | time since job start (4376s) is within the limit (172800.0s)
[2025-10-13 03:33:43] 2025-10-13 07:33:10,368 | INFO     | 
[2025-10-13 03:33:43] 2025-10-13 07:33:10,368 | INFO     | job summary report
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | --------------------------------------------------
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | PanDA job id: 6841070113
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | task id: 46676269
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | errors: (none)
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 03:33:43] 2025-10-13 07:33:10,369 | INFO     | pilot state: finished 
[2025-10-13 03:33:43] 2025-10-13 07:33:10,370 | INFO     | transexitcode: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:10,370 | INFO     | exeerrorcode: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:10,370 | INFO     | exeerrordiag: 
[2025-10-13 03:33:43] 2025-10-13 07:33:10,370 | INFO     | exitcode: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:10,370 | INFO     | exitmsg: OK
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | cpuconsumptiontime: 47042 s
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | nevents: 400
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | neventsw: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | pid: 7229
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | pgrp: 7229
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | corecount: 12
[2025-10-13 03:33:43] 2025-10-13 07:33:10,371 | INFO     | event service: False
[2025-10-13 03:33:43] 2025-10-13 07:33:10,372 | INFO     | sizes: {0: 2348686, 1: 2348885, 5: 2349147, 11: 2349203, 4349: 2375252, 4350: 2375251, 4351: 2384433, 4352: 2384489, 4359: 2384683}
[2025-10-13 03:33:43] 2025-10-13 07:33:10,372 | INFO     | --------------------------------------------------
[2025-10-13 03:33:43] 2025-10-13 07:33:10,372 | INFO     | 
[2025-10-13 03:33:43] 2025-10-13 07:33:10,372 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 03:33:43] 2025-10-13 07:33:10,418 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,419 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,420 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | job 6841070113 has completed (purged errors)
[2025-10-13 03:33:43] 2025-10-13 07:33:10,421 | INFO     | overall cleanup function is called
[2025-10-13 03:33:43] 2025-10-13 07:33:11,429 | INFO     | --- collectZombieJob: --- 10, [7229]
[2025-10-13 03:33:43] 2025-10-13 07:33:11,429 | INFO     | zombie collector waiting for pid 7229
[2025-10-13 03:33:43] 2025-10-13 07:33:11,429 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 03:33:43] 2025-10-13 07:33:11,429 | INFO     | collected zombie processes
[2025-10-13 03:33:43] 2025-10-13 07:33:11,429 | INFO     | will attempt to kill all subprocesses of pid=7229
[2025-10-13 03:33:43] 2025-10-13 07:33:11,520 | INFO     | process IDs to be killed: [7229] (in reverse order)
[2025-10-13 03:33:43] 2025-10-13 07:33:11,575 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 03:33:43] 2025-10-13 07:33:11,575 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 03:33:43] 2025-10-13 07:33:11,579 | INFO     | did not find any defunct processes belonging to 7229
[2025-10-13 03:33:43] 2025-10-13 07:33:11,582 | INFO     | did not find any defunct processes belonging to 7229
[2025-10-13 03:33:43] 2025-10-13 07:33:11,582 | INFO     | ready for new job
[2025-10-13 03:33:43] 2025-10-13 07:33:11,582 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 03:33:43] 2025-10-13 07:33:11,583 | INFO     | ***************************************
[2025-10-13 03:33:43] 2025-10-13 07:33:11,583 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 03:33:43] 2025-10-13 07:33:11,583 | INFO     | ***************************************
[2025-10-13 03:33:43] 2025-10-13 07:33:11,583 | INFO     | 
[2025-10-13 03:33:43] 2025-10-13 07:33:11,584 | INFO     | architecture information:
[2025-10-13 03:33:43] 2025-10-13 07:33:11,584 | INFO     | executing command: cat /etc/os-release
[2025-10-13 03:33:43] 2025-10-13 07:33:11,601 | INFO     | cat /etc/os-release:
[2025-10-13 03:33:43] NAME="CentOS Linux"
[2025-10-13 03:33:43] VERSION="7 (Core)"
[2025-10-13 03:33:43] ID="centos"
[2025-10-13 03:33:43] ID_LIKE="rhel fedora"
[2025-10-13 03:33:43] VERSION_ID="7"
[2025-10-13 03:33:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 03:33:43] ANSI_COLOR="0;31"
[2025-10-13 03:33:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 03:33:43] HOME_URL="https://www.centos.org/"
[2025-10-13 03:33:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 03:33:43] 
[2025-10-13 03:33:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 03:33:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 03:33:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 03:33:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 03:33:43] 
[2025-10-13 03:33:43] 2025-10-13 07:33:11,602 | INFO     | ***************************************
[2025-10-13 03:33:43] 2025-10-13 07:33:12,104 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 03:33:43] 2025-10-13 07:33:12,123 | INFO     | sufficient remaining disk space (29353836544 B)
[2025-10-13 03:33:43] 2025-10-13 07:33:12,123 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 03:33:43] 2025-10-13 07:33:12,123 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 03:33:43] 2025-10-13 07:33:12,123 | INFO     | update_server=False
[2025-10-13 03:33:43] 2025-10-13 07:33:12,123 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 03:33:43] 2025-10-13 07:33:12,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 03:33:43] 2025-10-13 07:33:12,396 | INFO     | all data control threads have been joined
[2025-10-13 03:33:43] 2025-10-13 07:33:12,963 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:43] 2025-10-13 07:33:12,964 | INFO     | aborting loop
[2025-10-13 03:33:43] 2025-10-13 07:33:13,129 | INFO     | [job] retrieve thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,135 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,182 | INFO     | all payload control threads have been joined
[2025-10-13 03:33:43] 2025-10-13 07:33:13,215 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 03:33:43] 2025-10-13 07:33:13,224 | INFO     | all job control threads have been joined
[2025-10-13 03:33:43] 2025-10-13 07:33:13,306 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,401 | INFO     | [data] control thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,677 | INFO     | [data] copytool_in thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,833 | INFO     | [payload] failed_post thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:13,969 | INFO     | [job] job monitor thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,129 | INFO     | [data] copytool_out thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,188 | INFO     | [payload] control thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,230 | INFO     | [job] control thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,347 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,398 | INFO     | [payload] validate_post thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,406 | INFO     | [job] validate thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:14,553 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:15,054 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 03:33:43] 2025-10-13 07:33:16,059 | INFO     | [job] queue monitor thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:17,221 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 03:33:43] 2025-10-13 07:33:21,352 | INFO     | [monitor] cgroup control has ended
[2025-10-13 03:33:43] 2025-10-13 07:33:22,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140660292843328)>', '<ExcThread(monitor, started 140659633678080)>']
[2025-10-13 03:33:43] 2025-10-13 07:33:27,085 | INFO     | all workflow threads have been joined
[2025-10-13 03:33:43] 2025-10-13 07:33:27,085 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 03:33:43] 2025-10-13 07:33:27,086 | INFO     | traces error code: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:27,086 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | INFO     | PID=617 has CPU usage=1.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 03:33:43] 2025-10-13 07:33:43,204 | INFO     | [monitor] control thread has ended
[2025-10-13 03:33:43] 2025-10-13 07:33:43,287 [wrapper] ==== pilot stdout END ====
[2025-10-13 03:33:43] 2025-10-13 07:33:43,291 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 03:33:43] 2025-10-13 07:33:43,295 [wrapper] pilotpid: 617
[2025-10-13 03:33:43] 2025-10-13 07:33:43,299 [wrapper] Pilot exit status: 0
[2025-10-13 03:33:43] 2025-10-13 07:33:43,315 [wrapper] pandaids: 6841070113
[2025-10-13 03:33:43] 2025-10-13 07:33:43,354 [wrapper] cleanup supervisor_pilot 17844 618
[2025-10-13 03:33:43] 2025-10-13 07:33:43,358 [wrapper] Test setup, not cleaning
[2025-10-13 03:33:43] 2025-10-13 07:33:43,362 [wrapper] apfmon messages muted
[2025-10-13 03:33:43] 2025-10-13 07:33:43,367 [wrapper] ==== wrapper stdout END ====
[2025-10-13 03:33:43] 2025-10-13 07:33:43,371 [wrapper] ==== wrapper stderr END ====
[2025-10-13 03:33:43]  *** Error codes and diagnostics ***
[2025-10-13 03:33:43]     "exeErrorCode": 0,
[2025-10-13 03:33:43]     "exeErrorDiag": "",
[2025-10-13 03:33:43]     "pilotErrorCode": 0,
[2025-10-13 03:33:43]     "pilotErrorDiag": "",
[2025-10-13 03:33:43]  *** Listing of results directory ***
[2025-10-13 03:33:43] total 421044
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:12 queuedata.json
[2025-10-13 03:33:43] -rwx------ 1 boincer umatlas     36292 Oct 12 21:15 runpilot2-wrapper.sh
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 03:33:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:19 run_atlas
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:19 job.xml
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas 221619397 Oct 13 02:19 EVNT.46676267._004723.pool.root.1
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:19 start_atlas.sh
[2025-10-13 03:33:43] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:19 shared
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas    569685 Oct 13 02:19 input.tar.gz
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:19 boinc_lockfile
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:20 pandaJob.out
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas    973230 Oct 13 02:20 agis_schedconf.cvmfs.json
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas   1560580 Oct 13 02:20 agis_ddmendpoints.agis.ALL.json
[2025-10-13 03:33:43] drwx------ 5 boincer umatlas      4096 Oct 13 02:20 pilot3
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 03:30 init_data.xml
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas 203583764 Oct 13 03:32 HITS.46676269._093918.pool.root.1
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas       529 Oct 13 03:32 boinc_task_state.xml
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas      1050 Oct 13 03:32 memory_monitor_summary.json
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas    389190 Oct 13 03:33 log.46676269._093918.job.log.tgz.1
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas      7854 Oct 13 03:33 heartbeat.json
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas        95 Oct 13 03:33 pilot_heartbeat.json
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas        27 Oct 13 03:33 wrapper_checkpoint.txt
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 03:33 boinc_mmap_file
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas       743 Oct 13 03:33 pilotlog.txt
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas    637363 Oct 13 03:33 log.46676269._093918.job.log.1
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas       357 Oct 13 03:33 output.list
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas       620 Oct 13 03:33 runtime_log
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas   1044480 Oct 13 03:33 result.tar.gz
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas      8705 Oct 13 03:33 runtime_log.err
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas       659 Oct 13 03:33 PJCNDmqKMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmBRVMDmJAzX6n.diag
[2025-10-13 03:33:43] -rw-r--r-- 1 boincer umatlas     22033 Oct 13 03:33 stderr.txt
[2025-10-13 03:33:43] HITS file was successfully produced:
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas 203583764 Oct 13 03:32 shared/HITS.pool.root.1
[2025-10-13 03:33:43]  *** Contents of shared directory: ***
[2025-10-13 03:33:43] total 416840
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas 221619397 Oct 13 02:19 ATLAS.root_0
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:19 start_atlas.sh
[2025-10-13 03:33:43] -rw-r--r-- 2 boincer umatlas    569685 Oct 13 02:19 input.tar.gz
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas 203583764 Oct 13 03:32 HITS.pool.root.1
[2025-10-13 03:33:43] -rw------- 1 boincer umatlas   1044480 Oct 13 03:33 result.tar.gz
03:33:44 (27094): run_atlas exited; CPU time 47031.789678
03:33:44 (27094): called boinc_finish(0)

</stderr_txt>
]]>

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