Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:15:11 (3293): wrapper (7.7.26015): starting
02:15:11 (3293): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:15:11] Arguments: --nthreads 8
[2025-10-13 02:15:11] Threads: 8
[2025-10-13 02:15:11] Checking for CVMFS
[2025-10-13 02:15:12] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:15:12] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:15:12] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:15:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:15:12] 2.11.2.0 8539 53982 131540 151650 0 188 11684285 18432000 1789 130560 0 51545832 99.976 2301834 37366 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:15:12] CVMFS is ok
[2025-10-13 02:15:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:15:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:15:12] Further information can be found at the LHC@home message board.
[2025-10-13 02:15:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:15:12] Checking for apptainer binary...
[2025-10-13 02:15:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:15:12] Running /usr/bin/apptainer --version
[2025-10-13 02:15:12] apptainer version 1.3.2-1.el7
[2025-10-13 02:15:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:15:13] c-206-1.aglt2.org
[2025-10-13 02:15:13] apptainer works
[2025-10-13 02:15:13] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:15:13] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:15:13] Starting ATLAS job with PandaID=6840849947
[2025-10-13 02:15:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 05:09:44]  *** The last 200 lines of the pilot log: ***
[2025-10-13 05:09:44] 2025-10-13 09:08:47,487 | INFO     | fitting pss+swap vs Time
[2025-10-13 05:09:44] 2025-10-13 09:08:47,487 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,489 | INFO     | sum of deviations: 19687462629.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,489 | INFO     | mean x: 1760341330.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,489 | INFO     | mean y: 2477874.134502924
[2025-10-13 05:09:44] 2025-10-13 09:08:47,489 | INFO     | -- intersect: -22350466107.146214
[2025-10-13 05:09:44] 2025-10-13 09:08:47,489 | INFO     | intersect: -22350466107.146214
[2025-10-13 05:09:44] 2025-10-13 09:08:47,490 | INFO     | chi2: 2.089229831850333
[2025-10-13 05:09:44] 2025-10-13 09:08:47,490 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,491 | INFO     | sum of deviations: 30409773039.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,492 | INFO     | mean x: 1760341177.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,492 | INFO     | mean y: 2489931.487951807
[2025-10-13 05:09:44] 2025-10-13 09:08:47,492 | INFO     | -- intersect: -37739352701.05153
[2025-10-13 05:09:44] 2025-10-13 09:08:47,492 | INFO     | intersect: -37739352701.05153
[2025-10-13 05:09:44] 2025-10-13 09:08:47,493 | INFO     | chi2: 1.2589795664275274
[2025-10-13 05:09:44] 2025-10-13 09:08:47,493 | INFO     | current chi2=1.2589795664275274 (change=39.73953716176319 %)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,493 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,494 | INFO     | sum of deviations: 29052213068.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,495 | INFO     | mean x: 1760341025.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,495 | INFO     | mean y: 2488265.633540373
[2025-10-13 05:09:44] 2025-10-13 09:08:47,495 | INFO     | -- intersect: -39519313345.25473
[2025-10-13 05:09:44] 2025-10-13 09:08:47,495 | INFO     | intersect: -39519313345.25473
[2025-10-13 05:09:44] 2025-10-13 09:08:47,496 | INFO     | chi2: 1.2596175634035145
[2025-10-13 05:09:44] 2025-10-13 09:08:47,496 | INFO     | current chi2=1.2596175634035145 (change=-0.0506757212746093 %)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,496 | INFO     | right removable region: 160
[2025-10-13 05:09:44] 2025-10-13 09:08:47,496 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,497 | INFO     | sum of deviations: -3433471589.500002
[2025-10-13 05:09:44] 2025-10-13 09:08:47,498 | INFO     | mean x: 1760341482.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,498 | INFO     | mean y: 2504219.9457831327
[2025-10-13 05:09:44] 2025-10-13 09:08:47,498 | INFO     | -- intersect: 4263817406.930632
[2025-10-13 05:09:44] 2025-10-13 09:08:47,498 | INFO     | intersect: 4263817406.930632
[2025-10-13 05:09:44] 2025-10-13 09:08:47,498 | INFO     | chi2: 0.8892493270395826
[2025-10-13 05:09:44] 2025-10-13 09:08:47,499 | INFO     | current chi2=0.8892493270395826 (change=57.43650059543636 %)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,499 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,500 | INFO     | sum of deviations: -7417236928.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,500 | INFO     | mean x: 1760341635.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,501 | INFO     | mean y: 2509043.4906832296
[2025-10-13 05:09:44] 2025-10-13 09:08:47,501 | INFO     | -- intersect: 10092709995.277126
[2025-10-13 05:09:44] 2025-10-13 09:08:47,501 | INFO     | intersect: 10092709995.277126
[2025-10-13 05:09:44] 2025-10-13 09:08:47,501 | INFO     | chi2: 0.8566167036727514
[2025-10-13 05:09:44] 2025-10-13 09:08:47,501 | INFO     | current chi2=0.8566167036727514 (change=3.66968209866057 %)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,502 | INFO     | left removable region: 20
[2025-10-13 05:09:44] 2025-10-13 09:08:47,502 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,503 | INFO     | sum of deviations: 4386173585.0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,503 | INFO     | mean x: 1760341604.5
[2025-10-13 05:09:44] 2025-10-13 09:08:47,503 | INFO     | mean y: 2519632.3857142855
[2025-10-13 05:09:44] 2025-10-13 09:08:47,503 | INFO     | -- intersect: -9072391814.894276
[2025-10-13 05:09:44] 2025-10-13 09:08:47,504 | INFO     | intersect: -9072391814.894276
[2025-10-13 05:09:44] 2025-10-13 09:08:47,504 | INFO     | chi2: 0.0003753221981064355
[2025-10-13 05:09:44] 2025-10-13 09:08:47,504 | INFO     | -- intersect: -9072391814.894276
[2025-10-13 05:09:44] 2025-10-13 09:08:47,504 | INFO     | current memory leak: 5.16 B/s (using 140 data points, chi2=0.00)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,505 | INFO     | could have reported an average CPU frequency of 2437 MHz (9 samples)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,505 | INFO     | ..............................
[2025-10-13 05:09:44] 2025-10-13 09:08:47,505 | INFO     | . Timing measurements:
[2025-10-13 05:09:44] 2025-10-13 09:08:47,505 | INFO     | . get job = 0 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . initial setup = 2 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . payload setup = 4 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . stage-in = 0 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . payload execution = 10376 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . stage-out = 1 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | . log creation = 0 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,506 | INFO     | ..............................
[2025-10-13 05:09:44] 2025-10-13 09:08:47,568 | INFO     | time since job start (10405s) is within the limit (172800.0s)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | 
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | job summary report
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | --------------------------------------------------
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | PanDA job id: 6840849947
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | task id: 46676269
[2025-10-13 05:09:44] 2025-10-13 09:08:47,668 | INFO     | errors: (none)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | pilot state: finished 
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | transexitcode: 0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | exeerrorcode: 0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | exeerrordiag: 
[2025-10-13 05:09:44] 2025-10-13 09:08:47,669 | INFO     | exitcode: 0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | exitmsg: OK
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | cpuconsumptiontime: 77351 s
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | nevents: 400
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | neventsw: 0
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | pid: 13436
[2025-10-13 05:09:44] 2025-10-13 09:08:47,670 | INFO     | pgrp: 13436
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | corecount: 8
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | event service: False
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10384: 2377948, 10386: 2387002, 10391: 2387204}
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | --------------------------------------------------
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | 
[2025-10-13 05:09:44] 2025-10-13 09:08:47,671 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-13 05:09:44] 2025-10-13 09:08:47,701 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,705 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,705 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,705 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,705 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,706 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,707 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,707 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,707 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,707 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,707 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,708 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,708 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,708 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,708 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 05:09:44] 2025-10-13 09:08:47,708 | INFO     | job 6840849947 has completed (purged errors)
[2025-10-13 05:09:44] 2025-10-13 09:08:47,709 | INFO     | overall cleanup function is called
[2025-10-13 05:09:44] 2025-10-13 09:08:48,717 | INFO     | --- collectZombieJob: --- 10, [13436]
[2025-10-13 05:09:44] 2025-10-13 09:08:48,717 | INFO     | zombie collector waiting for pid 13436
[2025-10-13 05:09:44] 2025-10-13 09:08:48,717 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 05:09:44] 2025-10-13 09:08:48,718 | INFO     | collected zombie processes
[2025-10-13 05:09:44] 2025-10-13 09:08:48,718 | INFO     | will attempt to kill all subprocesses of pid=13436
[2025-10-13 05:09:44] 2025-10-13 09:08:48,868 | INFO     | process IDs to be killed: [13436] (in reverse order)
[2025-10-13 05:09:44] 2025-10-13 09:08:48,919 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 05:09:44] 2025-10-13 09:08:48,919 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 05:09:44] 2025-10-13 09:08:48,922 | INFO     | did not find any defunct processes belonging to 13436
[2025-10-13 05:09:44] 2025-10-13 09:08:48,925 | INFO     | did not find any defunct processes belonging to 13436
[2025-10-13 05:09:44] 2025-10-13 09:08:48,925 | INFO     | ready for new job
[2025-10-13 05:09:44] 2025-10-13 09:08:48,925 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 05:09:44] 2025-10-13 09:08:48,926 | INFO     | ***************************************
[2025-10-13 05:09:44] 2025-10-13 09:08:48,926 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 05:09:44] 2025-10-13 09:08:48,926 | INFO     | ***************************************
[2025-10-13 05:09:44] 2025-10-13 09:08:48,926 | INFO     | 
[2025-10-13 05:09:44] 2025-10-13 09:08:48,927 | INFO     | architecture information:
[2025-10-13 05:09:44] 2025-10-13 09:08:48,928 | INFO     | executing command: cat /etc/os-release
[2025-10-13 05:09:44] 2025-10-13 09:08:48,939 | INFO     | cat /etc/os-release:
[2025-10-13 05:09:44] NAME="CentOS Linux"
[2025-10-13 05:09:44] VERSION="7 (Core)"
[2025-10-13 05:09:44] ID="centos"
[2025-10-13 05:09:44] ID_LIKE="rhel fedora"
[2025-10-13 05:09:44] VERSION_ID="7"
[2025-10-13 05:09:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 05:09:44] ANSI_COLOR="0;31"
[2025-10-13 05:09:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 05:09:44] HOME_URL="https://www.centos.org/"
[2025-10-13 05:09:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 05:09:44] 
[2025-10-13 05:09:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 05:09:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 05:09:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 05:09:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 05:09:44] 
[2025-10-13 05:09:44] 2025-10-13 09:08:48,939 | INFO     | ***************************************
[2025-10-13 05:09:44] 2025-10-13 09:08:49,442 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-13 05:09:44] 2025-10-13 09:08:49,458 | INFO     | sufficient remaining disk space (28374466560 B)
[2025-10-13 05:09:44] 2025-10-13 09:08:49,458 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 05:09:44] 2025-10-13 09:08:49,458 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 05:09:44] 2025-10-13 09:08:49,459 | INFO     | update_server=False
[2025-10-13 05:09:44] 2025-10-13 09:08:49,459 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 05:09:44] 2025-10-13 09:08:49,459 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 05:09:44] 2025-10-13 09:08:49,459 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:09:44] 2025-10-13 09:08:49,460 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 05:09:44] 2025-10-13 09:08:49,460 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 05:09:44] 2025-10-13 09:08:49,460 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 05:09:44] 2025-10-13 09:08:49,460 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 05:09:44] 2025-10-13 09:08:49,555 | INFO     | all job control threads have been joined
[2025-10-13 05:09:44] 2025-10-13 09:08:49,830 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 05:09:44] 2025-10-13 09:08:49,830 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 05:09:44] 2025-10-13 09:08:49,830 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 05:09:44] 2025-10-13 09:08:49,831 | INFO     | will abort loop
[2025-10-13 05:09:44] 2025-10-13 09:08:50,134 | INFO     | all data control threads have been joined
[2025-10-13 05:09:44] 2025-10-13 09:08:50,262 | INFO     | all payload control threads have been joined
[2025-10-13 05:09:44] 2025-10-13 09:08:50,464 | INFO     | [job] queue monitor thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:50,465 | INFO     | [job] retrieve thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:50,544 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 05:09:44] 2025-10-13 09:08:50,560 | INFO     | [job] control thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:50,837 | INFO     | [job] job monitor thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,088 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,140 | INFO     | [data] control thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,267 | INFO     | [payload] control thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,298 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,316 | INFO     | [data] copytool_in thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,362 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,430 | INFO     | [payload] failed_post thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,818 | INFO     | [job] validate thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:51,937 | INFO     | [payload] validate_post thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:52,550 | INFO     | [data] copytool_out thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:53,464 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:08:59,584 | INFO     | job.realtimelogging is not enabled
[2025-10-13 05:09:44] 2025-10-13 09:09:00,589 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 05:09:44] 2025-10-13 09:09:39,076 | INFO     | [monitor] cgroup control has ended
[2025-10-13 05:09:44] 2025-10-13 09:09:39,274 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139664124753728)>', '<ExcThread(monitor, started 139663536809728)>']
[2025-10-13 05:09:44] 2025-10-13 09:09:39,702 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 05:09:44] 2025-10-13 09:09:39,702 | INFO     | [monitor] control thread has ended
[2025-10-13 05:09:44] 2025-10-13 09:09:44,289 | INFO     | all workflow threads have been joined
[2025-10-13 05:09:44] 2025-10-13 09:09:44,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 05:09:44] 2025-10-13 09:09:44,290 | INFO     | traces error code: 0
[2025-10-13 05:09:44] 2025-10-13 09:09:44,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 05:09:44] 2025-10-13 09:09:44,373 [wrapper] ==== pilot stdout END ====
[2025-10-13 05:09:44] 2025-10-13 09:09:44,375 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 05:09:44] 2025-10-13 09:09:44,378 [wrapper] pilotpid: 6990
[2025-10-13 05:09:44] 2025-10-13 09:09:44,380 [wrapper] Pilot exit status: 0
[2025-10-13 05:09:44] 2025-10-13 09:09:44,389 [wrapper] pandaids: 6840849947
[2025-10-13 05:09:44] 2025-10-13 09:09:44,422 [wrapper] cleanup supervisor_pilot 19016 6991
[2025-10-13 05:09:44] 2025-10-13 09:09:44,427 [wrapper] Test setup, not cleaning
[2025-10-13 05:09:44] 2025-10-13 09:09:44,429 [wrapper] apfmon messages muted
[2025-10-13 05:09:44] 2025-10-13 09:09:44,431 [wrapper] ==== wrapper stdout END ====
[2025-10-13 05:09:44] 2025-10-13 09:09:44,433 [wrapper] ==== wrapper stderr END ====
[2025-10-13 05:09:44]  *** Error codes and diagnostics ***
[2025-10-13 05:09:44]     "exeErrorCode": 0,
[2025-10-13 05:09:44]     "exeErrorDiag": "",
[2025-10-13 05:09:44]     "pilotErrorCode": 0,
[2025-10-13 05:09:44]     "pilotErrorDiag": "",
[2025-10-13 05:09:44]  *** Listing of results directory ***
[2025-10-13 05:09:44] total 411596
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 17:57 pilot3.tar.gz
[2025-10-13 05:09:44] -rwx------ 1 boincer umatlas     36292 Oct 12 18:03 runpilot2-wrapper.sh
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 18:03 queuedata.json
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 05:09:44] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:15 run_atlas
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:15 job.xml
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas 219265329 Oct 13 02:15 EVNT.46676267._004053.pool.root.1
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 05:09:44] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:15 shared
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 02:15 input.tar.gz
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:15 boinc_lockfile
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:15 pandaJob.out
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas    973230 Oct 13 02:15 agis_schedconf.cvmfs.json
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas   1560580 Oct 13 02:15 agis_ddmendpoints.agis.ALL.json
[2025-10-13 05:09:44] drwx------ 5 boincer umatlas      4096 Oct 13 02:15 pilot3
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas      5949 Oct 13 05:02 init_data.xml
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas        95 Oct 13 05:07 pilot_heartbeat.json
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas 194556833 Oct 13 05:08 HITS.46676269._090539.pool.root.1
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas       530 Oct 13 05:08 boinc_task_state.xml
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas      1051 Oct 13 05:08 memory_monitor_summary.json
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas    411066 Oct 13 05:08 log.46676269._090539.job.log.tgz.1
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas      7851 Oct 13 05:08 heartbeat.json
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 05:09 boinc_mmap_file
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas        28 Oct 13 05:09 wrapper_checkpoint.txt
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas      4810 Oct 13 05:09 pilotlog.txt
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas   1465532 Oct 13 05:09 log.46676269._090539.job.log.1
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas       357 Oct 13 05:09 output.list
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas       620 Oct 13 05:09 runtime_log
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas   1894400 Oct 13 05:09 result.tar.gz
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas      8699 Oct 13 05:09 runtime_log.err
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas       659 Oct 13 05:09 3YSKDmYLJS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmQ7UMDmlo0wlm.diag
[2025-10-13 05:09:44] -rw-r--r-- 1 boincer umatlas     20796 Oct 13 05:09 stderr.txt
[2025-10-13 05:09:44] HITS file was successfully produced:
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas 194556833 Oct 13 05:08 shared/HITS.pool.root.1
[2025-10-13 05:09:44]  *** Contents of shared directory: ***
[2025-10-13 05:09:44] total 406560
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas 219265329 Oct 13 02:15 ATLAS.root_0
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:15 start_atlas.sh
[2025-10-13 05:09:44] -rw-r--r-- 2 boincer umatlas    569680 Oct 13 02:15 input.tar.gz
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas 194556833 Oct 13 05:08 HITS.pool.root.1
[2025-10-13 05:09:44] -rw------- 1 boincer umatlas   1894400 Oct 13 05:09 result.tar.gz
05:09:46 (3293): run_atlas exited; CPU time 77535.492978
05:09:46 (3293): called boinc_finish(0)

</stderr_txt>
]]>

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