Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
03:37:06 (3717361): wrapper (7.7.26015): starting
03:37:06 (3717361): wrapper: running run_atlas (--nthreads 9)
[2025-10-13 03:37:06] Arguments: --nthreads 9
[2025-10-13 03:37:06] Threads: 9
[2025-10-13 03:37:06] Checking for CVMFS
[2025-10-13 03:37:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 03:37:07] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 03:37:07] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 03:37:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 03:37:07] 2.13.2.0 2849342 130390 515776 151653 3 306 18002636 32935937 30577 16776704 0 268711520 99.643 246124095 20847 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-13 03:37:07] CVMFS is ok
[2025-10-13 03:37:07] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 03:37:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 03:37:07] Further information can be found at the LHC@home message board.
[2025-10-13 03:37:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 03:37:07] Checking for apptainer binary...
[2025-10-13 03:37:07] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 03:37:07] Running /usr/bin/apptainer --version
[2025-10-13 03:37:07] apptainer version 1.4.3-1.el9
[2025-10-13 03:37:07] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 03:37:07] c6-8-25-4.aglt2.org
[2025-10-13 03:37:07] apptainer works
[2025-10-13 03:37:07] Set ATHENA_PROC_NUMBER=9
[2025-10-13 03:37:07] Set ATHENA_CORE_NUMBER=9
[2025-10-13 03:37:07] Starting ATLAS job with PandaID=6841069750
[2025-10-13 03:37:07] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 06:23:54]  *** The last 200 lines of the pilot log: ***
[2025-10-13 06:23:54] 2025-10-13 10:23:07,760 | INFO     | fitting pss+swap vs Time
[2025-10-13 06:23:54] 2025-10-13 10:23:07,760 | INFO     | sum of square deviations: 1318249440.7901196
[2025-10-13 06:23:54] 2025-10-13 10:23:07,761 | INFO     | sum of deviations: -2941598899.308634
[2025-10-13 06:23:54] 2025-10-13 10:23:07,761 | INFO     | mean x: 1760346008.0864198
[2025-10-13 06:23:54] 2025-10-13 10:23:07,761 | INFO     | mean y: 2159552.450617284
[2025-10-13 06:23:54] 2025-10-13 10:23:07,762 | INFO     | -- intersect: 3930271880.4829216
[2025-10-13 06:23:54] 2025-10-13 10:23:07,762 | INFO     | intersect: 3930271880.4829216
[2025-10-13 06:23:54] 2025-10-13 10:23:07,762 | INFO     | chi2: 2.4452449880272003
[2025-10-13 06:23:54] 2025-10-13 10:23:07,762 | INFO     | sum of square deviations: 1199941311.515924
[2025-10-13 06:23:54] 2025-10-13 10:23:07,778 | INFO     | sum of deviations: 6435820717.878982
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | mean x: 1760345855.6050956
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | mean y: 2171336.4012738853
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | -- intersect: -9439349027.476397
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | intersect: -9439349027.476397
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | chi2: 1.673154258268966
[2025-10-13 06:23:54] 2025-10-13 10:23:07,779 | INFO     | current chi2=1.673154258268966 (change=31.5751891339587 %)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,780 | INFO     | sum of square deviations: 1088935644.625
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | sum of deviations: 8312165110.875003
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | mean x: 1760345703.125
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | mean y: 2173889.638157895
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | -- intersect: -13435061091.895864
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | intersect: -13435061091.895864
[2025-10-13 06:23:54] 2025-10-13 10:23:07,781 | INFO     | chi2: 1.6673554063242872
[2025-10-13 06:23:54] 2025-10-13 10:23:07,782 | INFO     | current chi2=1.6673554063242872 (change=0.3465820270916458 %)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,782 | INFO     | right removable region: 151
[2025-10-13 06:23:54] 2025-10-13 10:23:07,782 | INFO     | sum of square deviations: 1199883361.515924
[2025-10-13 06:23:54] 2025-10-13 10:23:07,787 | INFO     | sum of deviations: -24259978911.484077
[2025-10-13 06:23:54] 2025-10-13 10:23:07,787 | INFO     | mean x: 1760346160.6050956
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | mean y: 2186650.6050955416
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | -- intersect: 35593946735.716354
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | intersect: 35593946735.716354
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | chi2: 1.0143842517761676
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | current chi2=1.0143842517761676 (change=58.5160482183602 %)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,788 | INFO     | sum of square deviations: 1088829199.86842
[2025-10-13 06:23:54] 2025-10-13 10:23:07,789 | INFO     | sum of deviations: -26950502724.065792
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | mean x: 1760346313.118421
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | mean y: 2190250.0592105263
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | -- intersect: 43573962675.64291
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | intersect: 43573962675.64291
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | chi2: 0.9501450392382894
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | current chi2=0.9501450392382894 (change=6.332828257674208 %)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,790 | INFO     | left removable region: 20
[2025-10-13 06:23:54] 2025-10-13 10:23:07,791 | INFO     | sum of square deviations: 697034116.8854971
[2025-10-13 06:23:54] 2025-10-13 10:23:07,791 | INFO     | sum of deviations: -8903789917.458017
[2025-10-13 06:23:54] 2025-10-13 10:23:07,791 | INFO     | mean x: 1760346282.6717558
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | mean y: 2197651.6870229007
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | -- intersect: 22488548180.584064
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | intersect: 22488548180.584064
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | chi2: 0.12911985092873143
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | -- intersect: 22488548180.584064
[2025-10-13 06:23:54] 2025-10-13 10:23:07,792 | INFO     | current memory leak: -12.77 B/s (using 131 data points, chi2=0.13)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | could have reported an average CPU frequency of 2545 MHz (9 samples)
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | ..............................
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | . Timing measurements:
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | . get job = 0 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | . initial setup = 3 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,793 | INFO     | . payload setup = 13 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,794 | INFO     | . stage-in = 0 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,794 | INFO     | . payload execution = 9867 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,794 | INFO     | . stage-out = 3 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,794 | INFO     | . log creation = 0 s
[2025-10-13 06:23:54] 2025-10-13 10:23:07,794 | INFO     | ..............................
[2025-10-13 06:23:54] 2025-10-13 10:23:08,143 | INFO     | 
[2025-10-13 06:23:54] 2025-10-13 10:23:08,143 | INFO     | job summary report
[2025-10-13 06:23:54] 2025-10-13 10:23:08,143 | INFO     | --------------------------------------------------
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | PanDA job id: 6841069750
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | task id: 46676269
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | errors: (none)
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | pilot state: finished 
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | transexitcode: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | exeerrorcode: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | exeerrordiag: 
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | exitcode: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | exitmsg: OK
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | cpuconsumptiontime: 46052 s
[2025-10-13 06:23:54] 2025-10-13 10:23:08,144 | INFO     | nevents: 400
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | neventsw: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | pid: 3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | pgrp: 3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | corecount: 9
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | event service: False
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | sizes: {0: 2348686, 1: 2348885, 12: 2349175, 9885: 2377744, 9889: 2386742, 9891: 2386798, 9916: 2387184}
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | --------------------------------------------------
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | 
[2025-10-13 06:23:54] 2025-10-13 10:23:08,145 | INFO     | executing command: ls -lF /tmp/boinchome/slots/3
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,233 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,234 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 06:23:54] 2025-10-13 10:23:08,235 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,235 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 06:23:54] 2025-10-13 10:23:08,235 | INFO     | job 6841069750 has completed (purged errors)
[2025-10-13 06:23:54] 2025-10-13 10:23:08,235 | INFO     | overall cleanup function is called
[2025-10-13 06:23:54] 2025-10-13 10:23:09,248 | INFO     | --- collectZombieJob: --- 10, [3738388]
[2025-10-13 06:23:54] 2025-10-13 10:23:09,249 | INFO     | zombie collector waiting for pid 3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:09,249 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 06:23:54] 2025-10-13 10:23:09,249 | INFO     | collected zombie processes
[2025-10-13 06:23:54] 2025-10-13 10:23:09,249 | INFO     | will attempt to kill all subprocesses of pid=3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:11,052 | INFO     | process IDs to be killed: [3738388] (in reverse order)
[2025-10-13 06:23:54] 2025-10-13 10:23:11,274 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 06:23:54] 2025-10-13 10:23:11,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 06:23:54] 2025-10-13 10:23:11,294 | INFO     | did not find any defunct processes belonging to 3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:11,314 | INFO     | did not find any defunct processes belonging to 3738388
[2025-10-13 06:23:54] 2025-10-13 10:23:11,314 | INFO     | ready for new job
[2025-10-13 06:23:54] 2025-10-13 10:23:11,315 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 06:23:54] 2025-10-13 10:23:11,339 | INFO     | ***************************************
[2025-10-13 06:23:54] 2025-10-13 10:23:11,340 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 06:23:54] 2025-10-13 10:23:11,340 | INFO     | ***************************************
[2025-10-13 06:23:54] 2025-10-13 10:23:11,340 | INFO     | 
[2025-10-13 06:23:54] 2025-10-13 10:23:11,379 | INFO     | architecture information:
[2025-10-13 06:23:54] 2025-10-13 10:23:11,390 | INFO     | executing command: cat /etc/os-release
[2025-10-13 06:23:54] 2025-10-13 10:23:11,485 | INFO     | cat /etc/os-release:
[2025-10-13 06:23:54] NAME="CentOS Linux"
[2025-10-13 06:23:54] VERSION="7 (Core)"
[2025-10-13 06:23:54] ID="centos"
[2025-10-13 06:23:54] ID_LIKE="rhel fedora"
[2025-10-13 06:23:54] VERSION_ID="7"
[2025-10-13 06:23:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 06:23:54] ANSI_COLOR="0;31"
[2025-10-13 06:23:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 06:23:54] HOME_URL="https://www.centos.org/"
[2025-10-13 06:23:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 06:23:54] 
[2025-10-13 06:23:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 06:23:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 06:23:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 06:23:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 06:23:54] 
[2025-10-13 06:23:54] 2025-10-13 10:23:11,488 | INFO     | ***************************************
[2025-10-13 06:23:54] 2025-10-13 10:23:11,997 | INFO     | executing command: df -mP /tmp/boinchome/slots/3
[2025-10-13 06:23:54] 2025-10-13 10:23:12,074 | INFO     | sufficient remaining disk space (74168926208 B)
[2025-10-13 06:23:54] 2025-10-13 10:23:12,075 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 06:23:54] 2025-10-13 10:23:12,075 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 06:23:54] 2025-10-13 10:23:12,075 | INFO     | update_server=False
[2025-10-13 06:23:54] 2025-10-13 10:23:12,075 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 06:23:54] 2025-10-13 10:23:12,094 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-13 06:23:54] 2025-10-13 10:23:12,095 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-13 06:23:54] 2025-10-13 10:23:12,095 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:23:54] 2025-10-13 10:23:12,095 | INFO     | will abort loop
[2025-10-13 06:23:54] 2025-10-13 10:23:12,101 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 06:23:54] 2025-10-13 10:23:12,102 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 06:23:54] 2025-10-13 10:23:12,216 | INFO     | all payload control threads have been joined
[2025-10-13 06:23:54] 2025-10-13 10:23:12,730 | INFO     | all data control threads have been joined
[2025-10-13 06:23:54] 2025-10-13 10:23:13,081 | INFO     | [job] retrieve thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,112 | INFO     | [job] job monitor thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,141 | INFO     | [payload] failed_post thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,175 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 06:23:54] 2025-10-13 10:23:13,225 | INFO     | [payload] control thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,266 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,449 | INFO     | all job control threads have been joined
[2025-10-13 06:23:54] 2025-10-13 10:23:13,650 | INFO     | [job] validate thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,651 | INFO     | [data] copytool_in thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,736 | INFO     | [data] control thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,967 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:13,969 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:14,014 | INFO     | [payload] validate_post thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:14,107 | INFO     | [data] copytool_out thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:14,181 | INFO     | [job] queue monitor thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:14,455 | INFO     | [job] control thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:16,113 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:22,748 | INFO     | job.realtimelogging is not enabled
[2025-10-13 06:23:54] 2025-10-13 10:23:23,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 06:23:54] 2025-10-13 10:23:42,326 | INFO     | PID=3721546 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-13 06:23:54] 2025-10-13 10:23:42,326 | INFO     | .. there are 33 such processes running
[2025-10-13 06:23:54] 2025-10-13 10:23:42,327 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 06:23:54] 2025-10-13 10:23:42,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 06:23:54] 2025-10-13 10:23:42,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 06:23:54] 2025-10-13 10:23:46,615 | INFO     | [monitor] cgroup control has ended
[2025-10-13 06:23:54] 2025-10-13 10:23:47,692 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154273011520)>', '<ExcThread(monitor, started 140153641236224)>']
[2025-10-13 06:23:54] 2025-10-13 10:23:48,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 06:23:54] 2025-10-13 10:23:48,454 | INFO     | [monitor] control thread has ended
[2025-10-13 06:23:54] 2025-10-13 10:23:52,718 | INFO     | all workflow threads have been joined
[2025-10-13 06:23:54] 2025-10-13 10:23:52,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 06:23:54] 2025-10-13 10:23:52,719 | INFO     | traces error code: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:52,720 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 06:23:54] 2025-10-13 10:23:53,767 [wrapper] ==== pilot stdout END ====
[2025-10-13 06:23:54] 2025-10-13 10:23:53,824 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 06:23:54] 2025-10-13 10:23:53,855 [wrapper] pilotpid: 3721546
[2025-10-13 06:23:54] 2025-10-13 10:23:53,879 [wrapper] Pilot exit status: 0
[2025-10-13 06:23:54] 2025-10-13 10:23:54,010 [wrapper] pandaids: 6841069750
[2025-10-13 06:23:54] 2025-10-13 10:23:54,428 [wrapper] cleanup supervisor_pilot   30636 3721547
[2025-10-13 06:23:54] 2025-10-13 10:23:54,446 [wrapper] Test setup, not cleaning
[2025-10-13 06:23:54] 2025-10-13 10:23:54,465 [wrapper] apfmon messages muted
[2025-10-13 06:23:54] 2025-10-13 10:23:54,487 [wrapper] ==== wrapper stdout END ====
[2025-10-13 06:23:54] 2025-10-13 10:23:54,498 [wrapper] ==== wrapper stderr END ====
[2025-10-13 06:23:54]  *** Error codes and diagnostics ***
[2025-10-13 06:23:54]     "exeErrorCode": 0,
[2025-10-13 06:23:54]     "exeErrorDiag": "",
[2025-10-13 06:23:54]     "pilotErrorCode": 0,
[2025-10-13 06:23:54]     "pilotErrorDiag": "",
[2025-10-13 06:23:54]  *** Listing of results directory ***
[2025-10-13 06:23:54] total 409656
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas    557409 Oct 12 20:48 pilot3.tar.gz
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas      5112 Oct 12 21:06 queuedata.json
[2025-10-13 06:23:54] -rwx------. 1 boincer umatlas     36292 Oct 12 21:06 runpilot2-wrapper.sh
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas       100 Oct 13 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 06:23:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct 13 03:37 run_atlas
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas       105 Oct 13 03:37 job.xml
[2025-10-13 06:23:54] -rw-r--r--. 2 boincer umatlas 221180067 Oct 13 03:37 EVNT.46676267._004718.pool.root.1
[2025-10-13 06:23:54] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 06:23:54] drwxrwx--x. 2 boincer umatlas      4096 Oct 13 03:37 shared
[2025-10-13 06:23:54] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 03:37 input.tar.gz
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas         0 Oct 13 03:37 boinc_lockfile
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas      2550 Oct 13 03:37 pandaJob.out
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas    972849 Oct 13 03:37 agis_schedconf.cvmfs.json
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas   1560580 Oct 13 03:37 agis_ddmendpoints.agis.ALL.json
[2025-10-13 06:23:54] drwx------. 5 boincer umatlas      4096 Oct 13 03:37 pilot3
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas      6857 Oct 13 06:19 init_data.xml
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas 191037928 Oct 13 06:21 HITS.46676269._093790.pool.root.1
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas       529 Oct 13 06:21 boinc_task_state.xml
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas      1043 Oct 13 06:22 memory_monitor_summary.json
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas    416525 Oct 13 06:22 log.46676269._093790.job.log.tgz.1
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas        95 Oct 13 06:22 pilot_heartbeat.json
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas      7832 Oct 13 06:23 heartbeat.json
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas      5082 Oct 13 06:23 pilotlog.txt
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas      8192 Oct 13 06:23 boinc_mmap_file
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas        27 Oct 13 06:23 wrapper_checkpoint.txt
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas   1267615 Oct 13 06:23 log.46676269._093790.job.log.1
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas       357 Oct 13 06:23 output.list
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas       620 Oct 13 06:23 runtime_log
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas   1699840 Oct 13 06:23 result.tar.gz
[2025-10-13 06:23:54] -rw-------. 1 boincer umatlas       655 Oct 13 06:23 SUGODmRCMS8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmPKmNDmGGyYjn.diag
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas      8709 Oct 13 06:23 runtime_log.err
[2025-10-13 06:23:54] -rw-r--r--. 1 boincer umatlas     20988 Oct 13 06:23 stderr.txt
[2025-10-13 06:23:55] HITS file was successfully produced:
[2025-10-13 06:23:55] -rw-------. 1 boincer umatlas 191037928 Oct 13 06:21 shared/HITS.pool.root.1
[2025-10-13 06:23:55]  *** Contents of shared directory: ***
[2025-10-13 06:23:55] total 404808
[2025-10-13 06:23:55] -rw-r--r--. 2 boincer umatlas 221180067 Oct 13 03:37 ATLAS.root_0
[2025-10-13 06:23:55] -rw-r--r--. 2 boincer umatlas     15120 Oct 13 03:37 start_atlas.sh
[2025-10-13 06:23:55] -rw-r--r--. 2 boincer umatlas    569686 Oct 13 03:37 input.tar.gz
[2025-10-13 06:23:55] -rw-------. 1 boincer umatlas 191037928 Oct 13 06:21 HITS.pool.root.1
[2025-10-13 06:23:55] -rw-------. 1 boincer umatlas   1699840 Oct 13 06:23 result.tar.gz
06:23:56 (3717361): run_atlas exited; CPU time 46472.419146
06:23:56 (3717361): called boinc_finish(0)

</stderr_txt>
]]>

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