Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:01:08 (26336): wrapper (7.7.26015): starting
02:01:08 (26336): wrapper: running run_atlas (--nthreads 8)
[2025-10-13 02:01:08] Arguments: --nthreads 8
[2025-10-13 02:01:08] Threads: 8
[2025-10-13 02:01:08] Checking for CVMFS
[2025-10-13 02:01:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 02:01:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 02:01:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 02:01:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 02:01:09] 2.11.2.0 17210 53919 127668 151650 1 57 16892180 18432000 1833 130560 0 49478145 99.976 2423418 35112 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-13 02:01:09] CVMFS is ok
[2025-10-13 02:01:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 02:01:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 02:01:09] Further information can be found at the LHC@home message board.
[2025-10-13 02:01:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 02:01:09] Checking for apptainer binary...
[2025-10-13 02:01:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 02:01:09] Running /usr/bin/apptainer --version
[2025-10-13 02:01:09] apptainer version 1.3.2-1.el7
[2025-10-13 02:01:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 02:01:09] c-206-14.aglt2.org
[2025-10-13 02:01:09] apptainer works
[2025-10-13 02:01:09] Set ATHENA_PROC_NUMBER=8
[2025-10-13 02:01:09] Set ATHENA_CORE_NUMBER=8
[2025-10-13 02:01:09] Starting ATLAS job with PandaID=6841070304
[2025-10-13 02:01:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 04:55:43]  *** The last 200 lines of the pilot log: ***
[2025-10-13 04:55:43] 2025-10-13 08:54:53,203 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-13 04:55:43] 2025-10-13 08:54:53,206 | INFO     | fitting pss+swap vs Time
[2025-10-13 04:55:43] 2025-10-13 08:54:53,206 | INFO     | sum of square deviations: 1550429070.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,207 | INFO     | sum of deviations: -5864017474.000002
[2025-10-13 04:55:43] 2025-10-13 08:54:53,207 | INFO     | mean x: 1760340490.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,207 | INFO     | mean y: 2472074.9707602337
[2025-10-13 04:55:43] 2025-10-13 08:54:53,207 | INFO     | -- intersect: 6660414442.853301
[2025-10-13 04:55:43] 2025-10-13 08:54:53,207 | INFO     | intersect: 6660414442.853301
[2025-10-13 04:55:43] 2025-10-13 08:54:53,208 | INFO     | chi2: 2.225856370427299
[2025-10-13 04:55:43] 2025-10-13 08:54:53,208 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | sum of deviations: 5333853511.500006
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | mean x: 1760340337.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | mean y: 2484697.692771084
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | -- intersect: -6617405675.499827
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | intersect: -6617405675.499827
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | chi2: 1.4561274626881036
[2025-10-13 04:55:43] 2025-10-13 08:54:53,209 | INFO     | current chi2=1.4561274626881036 (change=34.58124782738924 %)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,210 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,210 | INFO     | sum of deviations: 5091203106.000001
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | mean x: 1760340185.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | mean y: 2484400.0186335403
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | -- intersect: -6923439715.641216
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | intersect: -6923439715.641216
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | chi2: 1.456694657782797
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | current chi2=1.456694657782797 (change=-0.03895229705004104 %)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,211 | INFO     | right removable region: 160
[2025-10-13 04:55:43] 2025-10-13 08:54:53,212 | INFO     | sum of square deviations: 1418361477.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,212 | INFO     | sum of deviations: -29279989995.999992
[2025-10-13 04:55:43] 2025-10-13 08:54:53,212 | INFO     | mean x: 1760340642.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | mean y: 2498722.2771084337
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | -- intersect: 36342146421.1143
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | intersect: 36342146421.1143
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | chi2: 0.9055153095388377
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | current chi2=0.9055153095388377 (change=59.31834050168271 %)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,213 | INFO     | sum of square deviations: 1294014960.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,214 | INFO     | sum of deviations: -27225294971.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,214 | INFO     | mean x: 1760340795.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,214 | INFO     | mean y: 2496134.4409937887
[2025-10-13 04:55:43] 2025-10-13 08:54:53,214 | INFO     | -- intersect: 37039005660.85299
[2025-10-13 04:55:43] 2025-10-13 08:54:53,215 | INFO     | intersect: 37039005660.85299
[2025-10-13 04:55:43] 2025-10-13 08:54:53,215 | INFO     | chi2: 0.8908027123462731
[2025-10-13 04:55:43] 2025-10-13 08:54:53,215 | INFO     | current chi2=0.8908027123462731 (change=1.6247761951211555 %)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,215 | INFO     | left removable region: 20
[2025-10-13 04:55:43] 2025-10-13 08:54:53,215 | INFO     | sum of square deviations: 850825255.0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,216 | INFO     | sum of deviations: -5247856443.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,216 | INFO     | mean x: 1760340764.5
[2025-10-13 04:55:43] 2025-10-13 08:54:53,216 | INFO     | mean y: 2494763.8357142857
[2025-10-13 04:55:43] 2025-10-13 08:54:53,216 | INFO     | -- intersect: 10860206813.928822
[2025-10-13 04:55:43] 2025-10-13 08:54:53,216 | INFO     | intersect: 10860206813.928822
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | chi2: 0.038482713711587145
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | -- intersect: 10860206813.928822
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | current memory leak: -6.17 B/s (using 140 data points, chi2=0.04)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | could have reported an average CPU frequency of 2554 MHz (9 samples)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | ..............................
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | . Timing measurements:
[2025-10-13 04:55:43] 2025-10-13 08:54:53,217 | INFO     | . get job = 0 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . initial setup = 2 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . payload setup = 4 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . stage-in = 0 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . payload execution = 10384 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . stage-out = 1 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | . log creation = 0 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,218 | INFO     | ..............................
[2025-10-13 04:55:43] 2025-10-13 08:54:53,321 | INFO     | 
[2025-10-13 04:55:43] 2025-10-13 08:54:53,322 | INFO     | job summary report
[2025-10-13 04:55:43] 2025-10-13 08:54:53,322 | INFO     | --------------------------------------------------
[2025-10-13 04:55:43] 2025-10-13 08:54:53,322 | INFO     | PanDA job id: 6841070304
[2025-10-13 04:55:43] 2025-10-13 08:54:53,322 | INFO     | task id: 46676269
[2025-10-13 04:55:43] 2025-10-13 08:54:53,322 | INFO     | errors: (none)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | pilot state: finished 
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | transexitcode: 0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | exeerrorcode: 0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | exeerrordiag: 
[2025-10-13 04:55:43] 2025-10-13 08:54:53,323 | INFO     | exitcode: 0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | exitmsg: OK
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | cpuconsumptiontime: 77984 s
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | nevents: 400
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | neventsw: 0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | pid: 4106
[2025-10-13 04:55:43] 2025-10-13 08:54:53,324 | INFO     | pgrp: 4106
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | corecount: 8
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | event service: False
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | sizes: {0: 2348857, 4: 2349119, 11: 2349147, 10392: 2377949, 10393: 2377948, 10394: 2387002, 10395: 2387186, 10398: 2387444}
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | --------------------------------------------------
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | 
[2025-10-13 04:55:43] 2025-10-13 08:54:53,325 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-13 04:55:43] 2025-10-13 08:54:53,347 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,348 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,348 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,348 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,348 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,349 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,350 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,351 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,351 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,351 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-13 04:55:43] 2025-10-13 08:54:53,351 | INFO     | job 6841070304 has completed (purged errors)
[2025-10-13 04:55:43] 2025-10-13 08:54:53,352 | INFO     | overall cleanup function is called
[2025-10-13 04:55:43] 2025-10-13 08:54:54,360 | INFO     | --- collectZombieJob: --- 10, [4106]
[2025-10-13 04:55:43] 2025-10-13 08:54:54,361 | INFO     | zombie collector waiting for pid 4106
[2025-10-13 04:55:43] 2025-10-13 08:54:54,361 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-13 04:55:43] 2025-10-13 08:54:54,361 | INFO     | collected zombie processes
[2025-10-13 04:55:43] 2025-10-13 08:54:54,361 | INFO     | will attempt to kill all subprocesses of pid=4106
[2025-10-13 04:55:43] 2025-10-13 08:54:54,501 | INFO     | process IDs to be killed: [4106] (in reverse order)
[2025-10-13 04:55:43] 2025-10-13 08:54:54,553 | WARNING  | found no corresponding commands to process id(s)
[2025-10-13 04:55:43] 2025-10-13 08:54:54,553 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-13 04:55:43] 2025-10-13 08:54:54,555 | INFO     | did not find any defunct processes belonging to 4106
[2025-10-13 04:55:43] 2025-10-13 08:54:54,558 | INFO     | did not find any defunct processes belonging to 4106
[2025-10-13 04:55:43] 2025-10-13 08:54:54,558 | INFO     | ready for new job
[2025-10-13 04:55:43] 2025-10-13 08:54:54,558 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-13 04:55:43] 2025-10-13 08:54:54,559 | INFO     | ***************************************
[2025-10-13 04:55:43] 2025-10-13 08:54:54,559 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-13 04:55:43] 2025-10-13 08:54:54,559 | INFO     | ***************************************
[2025-10-13 04:55:43] 2025-10-13 08:54:54,559 | INFO     | 
[2025-10-13 04:55:43] 2025-10-13 08:54:54,560 | INFO     | architecture information:
[2025-10-13 04:55:43] 2025-10-13 08:54:54,561 | INFO     | executing command: cat /etc/os-release
[2025-10-13 04:55:43] 2025-10-13 08:54:54,572 | INFO     | cat /etc/os-release:
[2025-10-13 04:55:43] NAME="CentOS Linux"
[2025-10-13 04:55:43] VERSION="7 (Core)"
[2025-10-13 04:55:43] ID="centos"
[2025-10-13 04:55:43] ID_LIKE="rhel fedora"
[2025-10-13 04:55:43] VERSION_ID="7"
[2025-10-13 04:55:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 04:55:43] ANSI_COLOR="0;31"
[2025-10-13 04:55:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 04:55:43] HOME_URL="https://www.centos.org/"
[2025-10-13 04:55:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 04:55:43] 
[2025-10-13 04:55:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 04:55:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 04:55:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 04:55:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 04:55:43] 
[2025-10-13 04:55:43] 2025-10-13 08:54:54,573 | INFO     | ***************************************
[2025-10-13 04:55:43] 2025-10-13 08:54:55,074 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-13 04:55:43] 2025-10-13 08:54:55,090 | INFO     | sufficient remaining disk space (28065136640 B)
[2025-10-13 04:55:43] 2025-10-13 08:54:55,091 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 04:55:43] 2025-10-13 08:54:55,091 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 04:55:43] 2025-10-13 08:54:55,091 | INFO     | update_server=False
[2025-10-13 04:55:43] 2025-10-13 08:54:55,091 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 04:55:43] 2025-10-13 08:54:55,092 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 04:55:43] 2025-10-13 08:54:55,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:55:43] 2025-10-13 08:54:55,184 | INFO     | all data control threads have been joined
[2025-10-13 04:55:43] 2025-10-13 08:54:55,231 | INFO     | all job control threads have been joined
[2025-10-13 04:55:43] 2025-10-13 08:54:55,278 | INFO     | all payload control threads have been joined
[2025-10-13 04:55:43] 2025-10-13 08:54:55,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 04:55:43] 2025-10-13 08:54:55,943 | INFO     | aborting loop
[2025-10-13 04:55:43] 2025-10-13 08:54:56,028 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 04:55:43] 2025-10-13 08:54:56,092 | INFO     | [job] retrieve thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,097 | INFO     | [job] queue monitor thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,190 | INFO     | [data] control thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,233 | INFO     | [job] control thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,283 | INFO     | [payload] control thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,398 | INFO     | [payload] failed_post thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,524 | INFO     | [payload] validate_post thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,536 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,551 | INFO     | [job] validate thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,553 | INFO     | [data] copytool_in thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:56,948 | INFO     | [job] job monitor thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:57,097 | INFO     | [data] copytool_out thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:57,109 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:54:57,395 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:55:00,034 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:55:05,468 | INFO     | job.realtimelogging is not enabled
[2025-10-13 04:55:43] 2025-10-13 08:55:06,475 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 04:55:43] 2025-10-13 08:55:24,242 | INFO     | 10416s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-13 04:55:43] 2025-10-13 08:55:25,441 | INFO     | PID=30004 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-13 04:55:43] 2025-10-13 08:55:25,442 | INFO     | .. there are 3 such processes running
[2025-10-13 04:55:43] 2025-10-13 08:55:25,442 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 04:55:43] 2025-10-13 08:55:25,442 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 04:55:43] 2025-10-13 08:55:25,442 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 04:55:43] 2025-10-13 08:55:36,731 | INFO     | [monitor] cgroup control has ended
[2025-10-13 04:55:43] 2025-10-13 08:55:38,539 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140230499489600)>', '<ExcThread(monitor, started 140230078232320)>']
[2025-10-13 04:55:43] 2025-10-13 08:55:39,515 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 04:55:43] 2025-10-13 08:55:39,515 | INFO     | [monitor] control thread has ended
[2025-10-13 04:55:43] 2025-10-13 08:55:43,564 | INFO     | all workflow threads have been joined
[2025-10-13 04:55:43] 2025-10-13 08:55:43,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 04:55:43] 2025-10-13 08:55:43,565 | INFO     | traces error code: 0
[2025-10-13 04:55:43] 2025-10-13 08:55:43,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 04:55:43] 2025-10-13 08:55:43,691 [wrapper] ==== pilot stdout END ====
[2025-10-13 04:55:43] 2025-10-13 08:55:43,693 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 04:55:43] 2025-10-13 08:55:43,695 [wrapper] pilotpid: 30004
[2025-10-13 04:55:43] 2025-10-13 08:55:43,697 [wrapper] Pilot exit status: 0
[2025-10-13 04:55:43] 2025-10-13 08:55:43,704 [wrapper] pandaids: 6841070304
[2025-10-13 04:55:43] 2025-10-13 08:55:43,730 [wrapper] cleanup supervisor_pilot 10676 30005
[2025-10-13 04:55:43] 2025-10-13 08:55:43,732 [wrapper] Test setup, not cleaning
[2025-10-13 04:55:43] 2025-10-13 08:55:43,734 [wrapper] apfmon messages muted
[2025-10-13 04:55:43] 2025-10-13 08:55:43,735 [wrapper] ==== wrapper stdout END ====
[2025-10-13 04:55:43] 2025-10-13 08:55:43,737 [wrapper] ==== wrapper stderr END ====
[2025-10-13 04:55:43]  *** Error codes and diagnostics ***
[2025-10-13 04:55:43]     "exeErrorCode": 0,
[2025-10-13 04:55:43]     "exeErrorDiag": "",
[2025-10-13 04:55:43]     "pilotErrorCode": 0,
[2025-10-13 04:55:43]     "pilotErrorDiag": "",
[2025-10-13 04:55:43]  *** Listing of results directory ***
[2025-10-13 04:55:43] total 410184
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas    557409 Oct 12 21:18 pilot3.tar.gz
[2025-10-13 04:55:43] -rwx------ 1 boincer umatlas     36292 Oct 12 21:29 runpilot2-wrapper.sh
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas      5112 Oct 12 21:29 queuedata.json
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas       100 Oct 13 02:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 04:55:43] -rwxr-xr-x 1 boincer umatlas      7986 Oct 13 02:01 run_atlas
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas       105 Oct 13 02:01 job.xml
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas 224865041 Oct 13 02:01 EVNT.46676267._004359.pool.root.1
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:01 start_atlas.sh
[2025-10-13 04:55:43] drwxrwx--x 2 boincer umatlas      4096 Oct 13 02:01 shared
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 02:01 input.tar.gz
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas         0 Oct 13 02:01 boinc_lockfile
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas      2550 Oct 13 02:01 pandaJob.out
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas    973230 Oct 13 02:01 agis_schedconf.cvmfs.json
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas   1560580 Oct 13 02:01 agis_ddmendpoints.agis.ALL.json
[2025-10-13 04:55:43] drwx------ 5 boincer umatlas      4096 Oct 13 02:01 pilot3
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas 187529230 Oct 13 04:54 HITS.46676269._094109.pool.root.1
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas       530 Oct 13 04:54 boinc_task_state.xml
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas      1054 Oct 13 04:54 memory_monitor_summary.json
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas        95 Oct 13 04:54 pilot_heartbeat.json
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas    405780 Oct 13 04:54 log.46676269._094109.job.log.tgz.1
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas      7856 Oct 13 04:54 heartbeat.json
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas      5953 Oct 13 04:55 init_data.xml
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas      8192 Oct 13 04:55 boinc_mmap_file
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas        28 Oct 13 04:55 wrapper_checkpoint.txt
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas      5009 Oct 13 04:55 pilotlog.txt
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas   1462986 Oct 13 04:55 log.46676269._094109.job.log.1
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas       357 Oct 13 04:55 output.list
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas       620 Oct 13 04:55 runtime_log
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas   1884160 Oct 13 04:55 result.tar.gz
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas      8704 Oct 13 04:55 runtime_log.err
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas       662 Oct 13 04:55 e0ANDmZYMS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmbSVMDmzIHFEm.diag
[2025-10-13 04:55:43] -rw-r--r-- 1 boincer umatlas     20899 Oct 13 04:55 stderr.txt
[2025-10-13 04:55:43] HITS file was successfully produced:
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas 187529230 Oct 13 04:54 shared/HITS.pool.root.1
[2025-10-13 04:55:43]  *** Contents of shared directory: ***
[2025-10-13 04:55:43] total 405152
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas 224865041 Oct 13 02:01 ATLAS.root_0
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas     15120 Oct 13 02:01 start_atlas.sh
[2025-10-13 04:55:43] -rw-r--r-- 2 boincer umatlas    569681 Oct 13 02:01 input.tar.gz
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas 187529230 Oct 13 04:54 HITS.pool.root.1
[2025-10-13 04:55:43] -rw------- 1 boincer umatlas   1884160 Oct 13 04:55 result.tar.gz
04:55:45 (26336): run_atlas exited; CPU time 78140.139343
04:55:45 (26336): called boinc_finish(0)

</stderr_txt>
]]>

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