Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:02:21 (3309526): wrapper (7.7.26015): starting
18:02:21 (3309526): wrapper: running run_atlas (--nthreads 3)
[2025-10-13 18:02:21] Arguments: --nthreads 3
[2025-10-13 18:02:21] Threads: 3
[2025-10-13 18:02:21] Checking for CVMFS
[2025-10-13 18:02:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-13 18:02:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-13 18:02:21] Running cvmfs_config stat atlas.cern.ch
[2025-10-13 18:02:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-13 18:02:21] 2.9.2.0 1532479 5791 85500 151666 1 57 30103042 36864001 0 130560 0 4660455 99.991 201367 749 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-13 18:02:21] CVMFS is ok
[2025-10-13 18:02:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-13 18:02:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-13 18:02:21] Further information can be found at the LHC@home message board.
[2025-10-13 18:02:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-13 18:02:21] Checking for apptainer binary...
[2025-10-13 18:02:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-13 18:02:21] Running /usr/bin/apptainer --version
[2025-10-13 18:02:21] apptainer version 1.4.1-1.1
[2025-10-13 18:02:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-13 18:02:21] magicA161
[2025-10-13 18:02:21] apptainer works
[2025-10-13 18:02:21] Set ATHENA_PROC_NUMBER=3
[2025-10-13 18:02:21] Set ATHENA_CORE_NUMBER=3
[2025-10-13 18:02:21] Starting ATLAS job with PandaID=6841069449
[2025-10-13 18:02:21] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-13 19:24:39]  *** The last 200 lines of the pilot log: ***
[2025-10-13 19:24:39] 2025-10-13 17:24:18,589 | INFO     | cat /etc/os-release:
[2025-10-13 19:24:39] NAME="CentOS Linux"
[2025-10-13 19:24:39] VERSION="7 (Core)"
[2025-10-13 19:24:39] ID="centos"
[2025-10-13 19:24:39] ID_LIKE="rhel fedora"
[2025-10-13 19:24:39] VERSION_ID="7"
[2025-10-13 19:24:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-13 19:24:39] ANSI_COLOR="0;31"
[2025-10-13 19:24:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-13 19:24:39] HOME_URL="https://www.centos.org/"
[2025-10-13 19:24:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-13 19:24:39] 
[2025-10-13 19:24:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-13 19:24:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-13 19:24:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-13 19:24:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-13 19:24:39] 
[2025-10-13 19:24:39] 2025-10-13 17:24:18,590 | INFO     | ***************************************
[2025-10-13 19:24:39] 2025-10-13 17:24:19,093 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | INFO     | sufficient remaining disk space (375646060544 B)
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | INFO     | current server update state: UPDATING_FINAL
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | INFO     | update_server=False
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-13 19:24:39] 2025-10-13 17:24:19,106 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | INFO     | found 0 job(s) in 20 queues
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-13 19:24:39] 2025-10-13 17:24:19,107 | INFO     | aborting loop
[2025-10-13 19:24:39] 2025-10-13 17:24:19,199 | INFO     | all payload control threads have been joined
[2025-10-13 19:24:39] 2025-10-13 17:24:19,788 | INFO     | all job control threads have been joined
[2025-10-13 19:24:39] 2025-10-13 17:24:19,888 | INFO     | all data control threads have been joined
[2025-10-13 19:24:39] 2025-10-13 17:24:19,911 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-13 19:24:39] 2025-10-13 17:24:19,930 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-13 19:24:39] 2025-10-13 17:24:20,112 | INFO     | [job] queue monitor thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,113 | INFO     | [job] retrieve thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,113 | INFO     | [job] job monitor thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,205 | INFO     | [payload] control thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,277 | INFO     | [payload] failed_post thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,493 | INFO     | [data] copytool_in thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,793 | INFO     | [job] control thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,794 | INFO     | [payload] validate_post thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,883 | INFO     | [job] validate thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,893 | INFO     | [data] control thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:20,992 | INFO     | [job] create_data_payload thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:21,027 | INFO     | [payload] validate_pre thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:21,340 | INFO     | [payload] execute_payloads thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:21,917 | INFO     | [data] copytool_out thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:23,936 | INFO     | [data] queue_monitor thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:29,501 | INFO     | job.realtimelogging is not enabled
[2025-10-13 19:24:39] 2025-10-13 17:24:30,507 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-13 19:24:39] 2025-10-13 17:24:32,891 | INFO     | [monitor] cgroup control has ended
[2025-10-13 19:24:39] 2025-10-13 17:24:34,720 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140612462245696)>', '<ExcThread(monitor, started 140611977991936)>']
[2025-10-13 19:24:39] 2025-10-13 17:24:35,193 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-13 19:24:39] 2025-10-13 17:24:35,193 | INFO     | [monitor] control thread has ended
[2025-10-13 19:24:39] 2025-10-13 17:24:39,746 | INFO     | all workflow threads have been joined
[2025-10-13 19:24:39] 2025-10-13 17:24:39,746 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-13 19:24:39] 2025-10-13 17:24:39,746 | INFO     | traces error code: 0
[2025-10-13 19:24:39] 2025-10-13 17:24:39,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-13 19:24:39] 2025-10-13 17:24:39,797 [wrapper] ==== pilot stdout END ====
[2025-10-13 19:24:39] 2025-10-13 17:24:39,800 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-13 19:24:39] 2025-10-13 17:24:39,802 [wrapper] pilotpid: 3313246
[2025-10-13 19:24:39] 2025-10-13 17:24:39,804 [wrapper] Pilot exit status: 0
[2025-10-13 19:24:39] 2025-10-13 17:24:39,812 [wrapper] pandaids: 6841069449
[2025-10-13 19:24:39] 2025-10-13 17:24:39,829 [wrapper] cleanup supervisor_pilot 3332219 3313247
[2025-10-13 19:24:39] 2025-10-13 17:24:39,832 [wrapper] Test setup, not cleaning
[2025-10-13 19:24:39] 2025-10-13 17:24:39,834 [wrapper] apfmon messages muted
[2025-10-13 19:24:39] 2025-10-13 17:24:39,837 [wrapper] ==== wrapper stdout END ====
[2025-10-13 19:24:39] 2025-10-13 17:24:39,839 [wrapper] ==== wrapper stderr END ====
[2025-10-13 19:24:39]  *** Error codes and diagnostics ***
[2025-10-13 19:24:39]     "exeErrorCode": 0,
[2025-10-13 19:24:39]     "exeErrorDiag": "",
[2025-10-13 19:24:39]     "pilotErrorCode": 0,
[2025-10-13 19:24:39]     "pilotErrorDiag": "",
[2025-10-13 19:24:39]  *** Listing of results directory ***
[2025-10-13 19:24:39] total 419116
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc    557409 Oct 13 02:48 pilot3.tar.gz
[2025-10-13 19:24:39] -rwx------ 1 boinc boinc     36292 Oct 13 02:57 runpilot2-wrapper.sh
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      5112 Oct 13 02:57 queuedata.json
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc       100 Oct 13 18:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-13 19:24:39] -rwxr-xr-x 1 boinc boinc      7986 Oct 13 18:02 run_atlas
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc       105 Oct 13 18:02 job.xml
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc 224788904 Oct 13 18:02 EVNT.46676267._004710.pool.root.1
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc    569682 Oct 13 18:02 input.tar.gz
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:02 start_atlas.sh
[2025-10-13 19:24:39] drwxrwx--x 2 boinc boinc      4096 Oct 13 18:02 shared
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:02 boinc_setup_complete
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      6449 Oct 13 18:02 init_data.xml
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc         0 Oct 13 18:02 boinc_lockfile
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      2550 Oct 13 18:02 pandaJob.out
[2025-10-13 19:24:39] -rw------- 1 boinc boinc    972783 Oct 13 18:02 agis_schedconf.cvmfs.json
[2025-10-13 19:24:39] -rw------- 1 boinc boinc   1560580 Oct 13 18:02 agis_ddmendpoints.agis.ALL.json
[2025-10-13 19:24:39] drwx------ 5 boinc boinc      4096 Oct 13 18:02 pilot3
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc       529 Oct 13 19:23 boinc_task_state.xml
[2025-10-13 19:24:39] -rw------- 1 boinc boinc 198564238 Oct 13 19:23 HITS.46676269._093581.pool.root.1
[2025-10-13 19:24:39] -rw------- 1 boinc boinc        95 Oct 13 19:23 pilot_heartbeat.json
[2025-10-13 19:24:39] -rw------- 1 boinc boinc      1011 Oct 13 19:24 memory_monitor_summary.json
[2025-10-13 19:24:39] -rw------- 1 boinc boinc    241720 Oct 13 19:24 log.46676269._093581.job.log.tgz.1
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      8192 Oct 13 19:24 boinc_mmap_file
[2025-10-13 19:24:39] -rw------- 1 boinc boinc      7762 Oct 13 19:24 heartbeat.json
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc        27 Oct 13 19:24 wrapper_checkpoint.txt
[2025-10-13 19:24:39] -rw------- 1 boinc boinc      4628 Oct 13 19:24 pilotlog.txt
[2025-10-13 19:24:39] -rw------- 1 boinc boinc    721812 Oct 13 19:24 log.46676269._093581.job.log.1
[2025-10-13 19:24:39] -rw------- 1 boinc boinc       357 Oct 13 19:24 output.list
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc       620 Oct 13 19:24 runtime_log
[2025-10-13 19:24:39] -rw------- 1 boinc boinc    983040 Oct 13 19:24 result.tar.gz
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      8792 Oct 13 19:24 runtime_log.err
[2025-10-13 19:24:39] -rw------- 1 boinc boinc       661 Oct 13 19:24 qF8NDmL3LS8n9Rq4apOajLDm4fhM0noT9bVof3QYDmzPVMDmI3dVgn.diag
[2025-10-13 19:24:39] -rw-r--r-- 1 boinc boinc      8805 Oct 13 19:24 stderr.txt
[2025-10-13 19:24:39] HITS file was successfully produced:
[2025-10-13 19:24:39] -rw------- 1 boinc boinc 198564238 Oct 13 19:23 shared/HITS.pool.root.1
[2025-10-13 19:24:39]  *** Contents of shared directory: ***
[2025-10-13 19:24:39] total 414980
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc 224788904 Oct 13 18:02 ATLAS.root_0
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc    569682 Oct 13 18:02 input.tar.gz
[2025-10-13 19:24:39] -rw-r--r-- 2 boinc boinc     15120 Oct 13 18:02 start_atlas.sh
[2025-10-13 19:24:39] -rw------- 1 boinc boinc 198564238 Oct 13 19:23 HITS.pool.root.1
[2025-10-13 19:24:39] -rw------- 1 boinc boinc    983040 Oct 13 19:24 result.tar.gz
19:24:41 (3309526): run_atlas exited; CPU time 14061.658733
19:24:41 (3309526): called boinc_finish(0)

</stderr_txt>
]]>

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